Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000643-TA|BGIBMGA000643-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 42 4e-04
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 42 4e-04
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 40 0.001
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 39 0.003
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 38 0.006
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 35 0.041
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 34 0.071
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 33 0.12
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 31 0.66
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 30 1.2
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 29 1.5
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 28 3.5
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 28 3.5
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 28 3.5
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 27 8.2
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 8.2
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 27 8.2
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/90 (27%), Positives = 37/90 (41%)
Query: 46 HPFYSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIY 105
HP + + + A+ GN +D AL + KAIEI+PT + N A+ Y
Sbjct: 68 HPVEEDSTAHVNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAY 127
Query: 106 KDTGNIKEAIESYKNALYFKPDFPDAYCNL 135
G + A+E L P A+ L
Sbjct: 128 NQLGQFENAVEDALTCLSLDPHHARAFGRL 157
Score = 30.7 bits (66), Expect = 0.66
Identities = 20/76 (26%), Positives = 30/76 (39%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
KAI I P YSN +L A+ + ++P + A L G+
Sbjct: 108 KAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDA 167
Query: 112 KEAIESYKNALYFKPD 127
A ++YK L F P+
Sbjct: 168 AAAADAYKKGLDFDPN 183
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 41.5 bits (93), Expect = 4e-04
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
KAI + A YSN + +D A+ KAIE +P ++ A+ A+ +
Sbjct: 30 KAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQP 89
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHN 154
KEA+ ++ AL P P A L C Q+V + E +HN
Sbjct: 90 KEAVGDFRKALALAPSDPAARKKLRECEQLV-KRIRFQEAIHN 131
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/108 (21%), Positives = 52/108 (48%)
Query: 57 QPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIE 116
+PK D+ + +G L +L D AL A I+P LA +Y++T + +++
Sbjct: 38 KPKHPDSVALLGLNLCKLHDSRSALLKCGYASSIDPKSQFCWHALAIVYRETKDYNNSLK 97
Query: 117 SYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLK 164
Y+NAL P+ + + A+ + + ++ + ++++ + L+
Sbjct: 98 CYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLDSSNLE 145
Score = 28.7 bits (61), Expect = 2.7
Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 5/154 (3%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
A I PK + + RE +D +L C++ A+ I+P + A + G +
Sbjct: 68 ASSIDPKSQFCWHALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQ 127
Query: 113 EAIESYKNALYFKPDFPDAYCNLAHCLQ--IVCNWDDYYERMHNIIEIVN-KQLKMDKLS 169
+++ L D + L L + N+ + E++ +I N L + +L
Sbjct: 128 PLFDNWNRLLQL--DSSNLEYRLCFTLSAFLSGNYKESLEQIQYLISSCNLSPLVVSRLI 185
Query: 170 SVHPHHSILYPLTNEARREIATRHANLYIDKLHF 203
S P ++ EI + N +++ +F
Sbjct: 186 SFLPRICEHIENGSQTVLEILLMNQNSFLNNFNF 219
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIE 116
P +A AY+++G R++ DM A CF+KA E++ + +A LA + + N E +E
Sbjct: 572 PNYAPAYTSLGLYYRDIHDMVRATKCFQKAFELDASQVEAAEALAKTFAE-ANEWELVE 629
Score = 30.3 bits (65), Expect = 0.88
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 59 KFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESY 118
KF ++++G ++ A+ F+ A+ I+P ++A L Y +G A++++
Sbjct: 648 KFNWHHTSLGVLELNAKNFHKAIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAF 707
Query: 119 KNALYFKPD 127
A PD
Sbjct: 708 NRASILDPD 716
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/107 (17%), Positives = 48/107 (44%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI ++ K ++ +G + + + A C+ +++ +N S N ++ ++
Sbjct: 921 QAIKLEAKNYVFWNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALCIQNHDV 980
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEI 158
+ A ++ ++ PD A+ A+C V + + +H+ EI
Sbjct: 981 ECANAAFTRSISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFEI 1027
Score = 27.1 bits (57), Expect = 8.2
Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Query: 59 KFADAYSNMGNTL--RELQD-MTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAI 115
K A+AY G + R+ ++ + + + F ++ +P ++ A+ +L Y+D ++ A
Sbjct: 536 KIAEAYYRYGIYILNRKSENYLEDSFSAFVSSLRKDPNYAPAYTSLGLYYRDIHDMVRAT 595
Query: 116 ESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMDKLSSVHPHH 175
+ ++ A +A LA W+ ++ LK K + H H
Sbjct: 596 KCFQKAFELDASQVEAAEALAKTFAEANEWELVEVISRRVLNTSENDLKRKKKFNWH-HT 654
Query: 176 SI 177
S+
Sbjct: 655 SL 656
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
N+AI + P F AY+ G+ ++ + F+KAI +N +A L +Y TG
Sbjct: 455 NRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVNVRHYNAWYGLGMVYLKTGR 514
Query: 111 IKEAIESYKNALYFKPD 127
+A ++ A P+
Sbjct: 515 NDQADFHFQRAAEINPN 531
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/87 (18%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 43 AIWH-------PFYSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFS 95
A+WH + +++ + P +++ + N ++ + AL C +AI+++PTF
Sbjct: 406 ALWHLQKSVPLSYLAHETLETNPYSPESWCILANCFSLQREHSQALKCINRAIQLDPTFE 465
Query: 96 DAHCNLASIYKDTGNIKEAIESYKNAL 122
A+ + +++ S++ A+
Sbjct: 466 YAYTLQGHEHSANEEYEKSKTSFRKAI 492
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
KAI + + +A+ +G + A F++A EINP S + IY+ +
Sbjct: 490 KAIRVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMIYERCKDY 549
Query: 112 KEAIESYKNA 121
K+A++ Y A
Sbjct: 550 KKALDFYDRA 559
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 34.7 bits (76), Expect = 0.041
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 59 KFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESY 118
+FA A ++G + D+ A+ CF ++++INP + A+E++
Sbjct: 519 RFAPAQRSLGKYYYKKGDLLQAMNCFNESLKINPLSYPTWFTYGCAALELQKYDAAMEAF 578
Query: 119 KNALYFKPDFPDAYCNLAHCL 139
L P+ +++ NLA +
Sbjct: 579 SRCLSINPEDGESWNNLASAM 599
Score = 34.7 bits (76), Expect = 0.041
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLAS-IYKDTG 109
N+++ I P + G ELQ A+ F + + INP ++ NLAS + K
Sbjct: 545 NESLKINPLSYPTWFTYGCAALELQKYDAAMEAFSRCLSINPEDGESWNNLASAMLKAKD 604
Query: 110 NIKE-AIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNK 161
+ KE A + + + + D + N V W + + IIEI K
Sbjct: 605 HTKEQAWHAMQQGIKYMYDNWRIWENYMLISVDVNKWSEVIRALRRIIEIKGK 657
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 33.9 bits (74), Expect = 0.071
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 62 DAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNA 121
+ + +G D AL+ ++ A+ NP A +A+I ++ AIE Y+
Sbjct: 335 ETWIQIGRLAELFDDQDKALSAYESALRQNPYSIPAMLQIATILRNREQFPLAIEYYQTI 394
Query: 122 LYFKPDFPDAYCNLAHC 138
L P + + L HC
Sbjct: 395 LDCDPKQGEIWSALGHC 411
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 48 FYSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKD 107
F + A I + S +GN L + A+ FK+A+++N + A + Y +
Sbjct: 325 FLAQVASSIDKFRPETCSIIGNYYSLLSEHEKAVTYFKRALQLNRNYLSAWTLMGHEYVE 384
Query: 108 TGNIKEAIESYKNAL 122
N AIESY+ A+
Sbjct: 385 LKNTHAAIESYRLAV 399
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 48 FYSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKD 107
+Y +A ++P + +GN ++ A+ +K+A+ + T S L ++Y++
Sbjct: 427 YYFQRATALRPYDQRMWQALGNCYEKIDRPQEAIKSYKRALLGSQTNSSILVRLGNLYEE 486
Query: 108 TGNIKEAIESYKNAL 122
++ A YK +
Sbjct: 487 LQDLNSAASMYKQCI 501
Score = 31.1 bits (67), Expect = 0.50
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
A+ + K A+ +G T L AL F++A + P L + Y+ +
Sbjct: 398 AVDVNRKDYRAWYGLGQTYEVLDMHFYALYYFQRATALRPYDQRMWQALGNCYEKIDRPQ 457
Query: 113 EAIESYKNAL 122
EAI+SYK AL
Sbjct: 458 EAIKSYKRAL 467
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/92 (19%), Positives = 41/92 (44%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y +A+ + + A++ MG+ EL++ A+ ++ A+++N A L Y+
Sbjct: 360 YFKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYRLAVDVNRKDYRAWYGLGQTYEVL 419
Query: 109 GNIKEAIESYKNALYFKPDFPDAYCNLAHCLQ 140
A+ ++ A +P + L +C +
Sbjct: 420 DMHFYALYYFQRATALRPYDQRMWQALGNCYE 451
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 30.7 bits (66), Expect = 0.66
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
NKAI + P FA AY L L+D + +A E++ + NL I
Sbjct: 457 NKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIESQLSK 516
Query: 111 IKEAIESYK 119
A+ S +
Sbjct: 517 CMSAMASQR 525
Score = 29.5 bits (63), Expect = 1.5
Identities = 30/156 (19%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Query: 11 LGNVKREQGKIDEATNLYMKALEV----SLILRQLIAIWHPFYSNKAIGIQPKFADAYSN 66
LG +++G + +A + Y ++L ++ R A ++ I P A+
Sbjct: 345 LGTTYQKRGDLVKAIDYYQRSLTEHRTPDILSRLKDAEKSKELQDREAYIDPDKAEESRV 404
Query: 67 MGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKP 126
GN L + D A+ + + + P+ N A+ Y E I A+ P
Sbjct: 405 KGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRDCNKAIELDP 464
Query: 127 DFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQ 162
+F AY A L ++ +++ + + E+ ++
Sbjct: 465 NFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRRE 500
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/74 (22%), Positives = 29/74 (39%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y +AIG+ + YSN +D AL K E+ P ++ +
Sbjct: 24 YFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKCTELKPDWAKGWSRKGAALHGL 83
Query: 109 GNIKEAIESYKNAL 122
G++ A +Y+ L
Sbjct: 84 GDLDAARSAYEEGL 97
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 65 SNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYF 124
+ +G + L++ + CF++A++ P+ L + + EA+ SY A+
Sbjct: 442 AGLGIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSL 501
Query: 125 KPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIV-NKQLKMDKLSS 170
+P + N+A + ++D + + I+I+ N M+ S
Sbjct: 502 QPQYVRVRSNMAVSNINLGYFEDAAKHLLAAIDIIQNSSTSMESCES 548
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/112 (17%), Positives = 48/112 (42%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
N A + +D Y + + A++ ++K+I ++ +F +H L T
Sbjct: 405 NDAESVDKTDSDLYYHRAQVRFVSGEFAEAISDYQKSIALDDSFIYSHIQLGVAQYKTHA 464
Query: 111 IKEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQ 162
I E+++++++ P+ + Y L +DD + + IE+ ++
Sbjct: 465 IAESMKTFEDCKKRFPNSSEVYNYFGEILLDQQKFDDAVKNFDHAIELEKRE 516
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 28.3 bits (60), Expect = 3.5
Identities = 27/155 (17%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 13 NVKREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFADAYSNMGNTLR 72
++K + GK N Y +++ + ++++ W + I + +DA ++ +
Sbjct: 97 DLKIQLGKCPFTINAYWRSMCIQFDNPEMLSQWASNLNLLGIPTGLRDSDATTHFVMNRQ 156
Query: 73 ELQDMT-GALACF-KKAIEINPTFSDAHCNLA-SIYKDTGNIKEAIESYKNALYFKPDFP 129
+T G + F KK + I+ ++ + S+ +D + +A+E +KN + FP
Sbjct: 157 AGSSITVGTMYAFLKKTVIIDDSYLQYLSTVKESVIEDASLMPDALECFKNIIKNNDQFP 216
Query: 130 DAYCNLAHCLQ-IVCNWDDYYERMHNIIEIVNKQL 163
+ + + L+ C + H+++E++ ++
Sbjct: 217 SSPEDCINSLEGFSCAMLNTSSESHHLLELLGLRI 251
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 416 CDKTIVSFENLEEIEFIIRKVNIPNYVLDTTINPKQEKLYKIDPRIMESWVT 467
C + I++ N E+ F++R +N P+YV + + + L +I ME W++
Sbjct: 592 CSECIINEWNREKWMFVLRAINEPDYVEELCGLREVQALGEI-AGTMEEWIS 642
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 382 KYKVLIDNNSIAHENVALINSSEFINIDEVFNVRCDKTIVSFENLEEIEFIIRKVNIPNY 441
KY ++ N+ + H V + + EV + K SFE LE++E I+K N
Sbjct: 157 KYVKMLVNSRMEHNKVGQFSRGLKVVAGEVQRILAPK---SFEQLEQLEAQIQKKLKSNV 213
Query: 442 VLDT 445
LDT
Sbjct: 214 PLDT 217
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 352 LSEDFSEKFAYMPHTYFVGDHKKMFPHLKTKYK 384
L+ DF +F P TY + MFP LK Y+
Sbjct: 244 LTLDFLFQFVIEPQTYPTREENLMFPKLKGHYE 276
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 9 QNLGNVKRE-QGKIDEATNLYMKALEVSLILRQ 40
+ +G ++ E QG ++EAT+ Y K E+ +L+Q
Sbjct: 653 EKVGKLEYEVQGTLEEATSYYQKNTELQQLLKQ 685
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 69 NTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNA 121
N E+ D+T + KA++ P D LA IY G + IE++ A
Sbjct: 168 NVAWEVLDLTRVMQ--SKAVDAYPDSKDEKIRLADIYDLLGELSLEIENFSQA 218
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.136 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,133,555
Number of Sequences: 5004
Number of extensions: 138592
Number of successful extensions: 413
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 372
Number of HSP's gapped (non-prelim): 43
length of query: 652
length of database: 2,362,478
effective HSP length: 77
effective length of query: 575
effective length of database: 1,977,170
effective search space: 1136872750
effective search space used: 1136872750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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