GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000643-TA|BGIBMGA000643-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
         (652 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    31   0.096
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   3.6  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 31.1 bits (67), Expect = 0.096
 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 10/121 (8%)

Query: 10  NLGNVKREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFADAYSNMGN 69
           N+  +    G +DEA +   +A+E + I  Q  A    +Y + ++ +    A  Y  M  
Sbjct: 455 NVAALHYRLGNLDEAMSKLEQAIERAKIEAQHDA---QYYDSISVSMTYNLARLYEAMA- 510

Query: 70  TLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPDFP 129
               + D    L  +K  ++ +P + D +  L  + +D G I  A + +K+AL    + P
Sbjct: 511 ----VFDKADKL--YKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALKINMENP 564

Query: 130 D 130
           D
Sbjct: 565 D 565



 Score = 29.1 bits (62), Expect = 0.39
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 75  QDMTGALACFKKAIEINPTFSDA-HCNLASIYKDTGNIKEAIESYKNALYFKPDFPDAYC 133
           +D  GALA +KKA+  NP    A    +   +    N  +A  +++ AL  +P    A  
Sbjct: 176 KDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKLSNPDKAKLAFQRALDLEPQCVGALV 235

Query: 134 NLA 136
            LA
Sbjct: 236 GLA 238



 Score = 28.3 bits (60), Expect = 0.68
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 72  RELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPDFPDA 131
           +E +    ALA +K+ +  +P    A   + ++    G I EA + +        DF D 
Sbjct: 623 KEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATADFCDV 682

Query: 132 YCNLAH 137
           + N+AH
Sbjct: 683 WINIAH 688



 Score = 28.3 bits (60), Expect = 0.68
 Identities = 19/65 (29%), Positives = 27/65 (41%)

Query: 58  PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
           PK   A + +G  L     +  A   F +  E    F D   N+A IY +      AI+ 
Sbjct: 643 PKNIWAANGIGAVLAHKGCIIEARDIFAQVREATADFCDVWINIAHIYVEQKQYISAIQM 702

Query: 118 YKNAL 122
           Y+N L
Sbjct: 703 YENCL 707



 Score = 25.4 bits (53), Expect = 4.8
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 14/152 (9%)

Query: 85  KKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYF-----KPDFPDAYCNLAHCL 139
           KK  E  P   +A   LA I +   +++ ++++Y  A          D P    N    L
Sbjct: 401 KKVTEQFPDDVEAWIELAQILEQN-DLQGSLQAYGTATSILTEKVNADIPPEILNNVAAL 459

Query: 140 QI-VCNWDDYYERMHNIIEIVNKQLKMDKLSSVHPHHSILYPLTNEARREIATRHANLYI 198
              + N D+   ++   IE    + K++       + SI   +T    R      A    
Sbjct: 460 HYRLGNLDEAMSKLEQAIE----RAKIEAQHDAQYYDSISVSMTYNLAR---LYEAMAVF 512

Query: 199 DKLHFLQNTVTFQHPKVMEGRLRIGYVSSDFG 230
           DK   L   +  +HP  ++  LR+G ++ D G
Sbjct: 513 DKADKLYKDILKEHPNYIDCYLRLGCMARDKG 544


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.8 bits (54), Expect = 3.6
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 381 TKYKVLIDNNSIAHENVALINSSEFINIDEVFNVRCDKTIVS------FENLEEIEFIIR 434
           T+ KVL   N+  HE  A +    F  +D++  +      +S      FE+L  + ++  
Sbjct: 131 TQVKVLWLKNNANHEQSASLVRHHFAGLDQLDRLAISNAKLSDIGPDLFEHLPNLTWLDM 190

Query: 435 KVNI---PNYVLDT-----TINPKQEKLYKIDPRIMESW--VTILKLVPNSVLWLLSFPA 484
           + NI   P  + D       +      L ++DPR++     + +L L  N +  L     
Sbjct: 191 RDNIFRLPATIFDALPKLRVLELSFNSLEELDPRLLRHLPNLRLLTLWHNKLRTLSRAAF 250

Query: 485 AGEPNIQKYGLN 496
           AG P +++  L+
Sbjct: 251 AGVPELERLDLS 262


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,149
Number of Sequences: 2123
Number of extensions: 29677
Number of successful extensions: 50
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 8
length of query: 652
length of database: 516,269
effective HSP length: 68
effective length of query: 584
effective length of database: 371,905
effective search space: 217192520
effective search space used: 217192520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)