Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000643-TA|BGIBMGA000643-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transfera... 329 4e-90
At3g11540.1 68416.m01407 gibberellin signal transduction protein... 120 4e-27
At3g11540.2 68416.m01408 gibberellin signal transduction protein... 118 9e-27
At1g05150.1 68414.m00518 calcium-binding EF hand family protein ... 54 3e-07
At2g32450.1 68415.m03964 calcium-binding EF hand family protein ... 53 7e-07
At5g17270.1 68418.m02023 tetratricopeptide repeat (TPR)-containi... 50 6e-06
At3g48150.1 68416.m05251 cell division cycle family protein / CD... 49 8e-06
At5g37130.1 68418.m04457 tetratricopeptide repeat (TPR)-containi... 48 3e-05
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 45 2e-04
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 42 0.001
At5g10090.1 68418.m01169 tetratricopeptide repeat (TPR)-containi... 42 0.002
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 42 0.002
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 41 0.002
At2g42810.1 68415.m05300 serine/threonine protein phosphatase, p... 41 0.003
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 40 0.005
At5g63200.1 68418.m07935 tetratricopeptide repeat (TPR)-containi... 39 0.009
At2g29670.1 68415.m03606 expressed protein 39 0.009
At1g78770.1 68414.m09180 cell division cycle family protein simi... 39 0.009
At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containi... 39 0.012
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 38 0.016
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta... 38 0.028
At2g20000.1 68415.m02338 cell division cycle family protein / CD... 38 0.028
At1g76630.1 68414.m08916 tetratricopeptide repeat (TPR)-containi... 37 0.048
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi... 36 0.064
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 36 0.11
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 36 0.11
At3g47840.1 68416.m05215 pentatricopeptide (PPR) repeat-containi... 35 0.15
At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containi... 35 0.15
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 35 0.19
At5g56290.1 68418.m07026 peroxisomal targeting signal type 1 rec... 33 0.45
At4g23570.2 68417.m03396 phosphatase-related low similarity to p... 33 0.45
At4g23570.1 68417.m03395 phosphatase-related low similarity to p... 33 0.45
At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1) domain... 33 0.59
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 33 0.78
At4g10840.2 68417.m01764 kinesin light chain-related low similar... 32 1.0
At4g10840.1 68417.m01765 kinesin light chain-related low similar... 32 1.0
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 32 1.0
At4g11260.1 68417.m01822 phosphatase-related low similarity to p... 32 1.4
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 31 1.8
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 31 2.4
At3g16320.1 68416.m02061 cell division cycle family protein / CD... 31 2.4
At5g44330.1 68418.m05428 male sterility MS5 family protein simil... 31 3.2
At3g62890.1 68416.m07065 pentatricopeptide (PPR) repeat-containi... 30 4.2
At2g36690.1 68415.m04501 oxidoreductase, 2OG-Fe(II) oxygenase fa... 30 4.2
At1g27500.1 68414.m03352 kinesin light chain-related low similar... 30 4.2
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 30 5.5
At4g07675.1 68417.m01204 hypothetical protein 30 5.5
At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containi... 29 7.3
At5g09700.1 68418.m01124 glycosyl hydrolase family 3 protein con... 29 9.7
At4g10500.1 68417.m01722 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 9.7
At1g04770.1 68414.m00473 male sterility MS5 family protein simil... 29 9.7
>At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transferase,
putative similar to O-GlcNAc transferase, Homo sapiens
[SP|O15294], Rattus norvegicus [SP|P56558]; contains
Pfam profile PF00515: TPR Domain; identical to cDNA
GI:18139886
Length = 977
Score = 329 bits (808), Expect = 4e-90
Identities = 174/383 (45%), Positives = 240/383 (62%), Gaps = 19/383 (4%)
Query: 10 NLGNVKREQGKIDEATNLYMKALEVSLIL----RQLIAIWHPF--YS------NKAIGIQ 57
NLGN+ E + A++L+ L V+ L L I+ YS N+ + I
Sbjct: 364 NLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVLRID 423
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
P ADA N GNT +E+ +T A+ + AI PT ++AH NLAS YKD+G+++ AI S
Sbjct: 424 PLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAITS 483
Query: 118 YKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMDKLSSVHPHHSI 177
YK AL +PDFP+A CNL H LQ VC W+D + + I+ +Q+ M L SV P H+I
Sbjct: 484 YKQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQINMSVLPSVQPFHAI 543
Query: 178 LYPLTNEARREIATR---HANLYIDKLHFLQNTVTFQHPKVMEG---RLRIGYVSSDFGN 231
YP+ EI+ + H ++ + T P EG RLRIGYVSSDFGN
Sbjct: 544 AYPIDPILALEISRKYAAHCSIIASRFGLPPFTHPAGLPVKREGGFKRLRIGYVSSDFGN 603
Query: 232 HPTSHLMQSIPGSHDRSKVEVFCYALNADDGTTFRRKIVEESENFIDLSCIPCNMEAATR 291
HP SHLM S+ G H+R VEVFCYAL+A+D T +R++I E+E+F+D+S + + A
Sbjct: 604 HPLSHLMGSVFGMHNRENVEVFCYALSANDNTEWRQRIQSEAEHFLDVSAMSSD-AIAKI 662
Query: 292 IHRDGIHILINMNGYTKGARNEIFALKPAPIQVMWLGYPGTSGAGYIDYMITDEVSAPLS 351
I++D I ILIN+NGYTKGARNEIFA++PAPIQV ++G+PGT+GA YIDY++TDE +PL
Sbjct: 663 INQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPLQ 722
Query: 352 LSEDFSEKFAYMPHTYFVGDHKK 374
+ +SEK ++PH YFV D+K+
Sbjct: 723 YAHIYSEKLVHLPHCYFVNDYKQ 745
Score = 171 bits (416), Expect = 1e-42
Identities = 85/198 (42%), Positives = 117/198 (59%), Gaps = 8/198 (4%)
Query: 453 KLYKIDPRIMESWVTILKLVPNSVLWLLSFPAAGEPNIQKYGLNLGKDSQTECLTPGRII 512
+LYK+DP I+ +W ILK VPNS LWLL FPAAGE + Y G + P +II
Sbjct: 776 QLYKMDPEIVNTWCNILKRVPNSALWLLRFPAAGEMRFRTYAAAQG-------VQPDQII 828
Query: 513 FSKIACKEEHVRRGQLADICLDTPLCNGHTTTMDILWTGTPVVTLPGDTLASRVAASQLT 572
F+ +A K EH+RR LAD+ LDTPLCNGHTT D+LW G P++TLP + +A+RVA S
Sbjct: 829 FTDVAMKSEHIRRSVLADVILDTPLCNGHTTGTDVLWAGVPMITLPLEKMATRVAGSLCL 888
Query: 573 ALHCTE-LIAKNRKHYEDIAIKLGTDSAYRRYIRAKVSKARLESTLFDCEHYARGLESLY 631
A +I + + YE+ A+ L + + + ++ +RL LFD + + LE Y
Sbjct: 889 ATGLGHGMIVNSLEEYEEKAVSLALNKPKLQALTKELRASRLTCPLFDTMRWVKNLERSY 948
Query: 632 SKMWELYQRGDKPDHIAV 649
KMW L+ G +P H V
Sbjct: 949 FKMWNLHCSGQQPQHFKV 966
Score = 83.8 bits (198), Expect = 3e-16
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 13/194 (6%)
Query: 10 NLGNVKREQGKIDEATNLYMKALEV----SLILRQLIAIWHPF--------YSNKAIGIQ 57
NLGN+ + QG I EA + Y++A+ + ++ L ++ Y +A+ ++
Sbjct: 194 NLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLK 253
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
P F DAY N+GN + L T A+ C++ A+++ P + A N+ASIY + G + AI
Sbjct: 254 PAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRH 313
Query: 118 YKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEI-VNKQLKMDKLSSVHPHHS 176
YK AL P F +AY NL + L+ + D+ + + + N M L +++ +
Sbjct: 314 YKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANLGNIYMEWN 373
Query: 177 ILYPLTNEARREIA 190
++ P ++ + +A
Sbjct: 374 MMGPASSLFKATLA 387
Score = 80.6 bits (190), Expect = 3e-15
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 10 NLGNVKREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNK------------AIGIQ 57
N+ N +E+G D A Y+ A+E+ + Y K A+ +
Sbjct: 126 NMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALSLN 185
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
P DA+SN+GN ++ + A +C+ +A+ I PTF+ A NLA ++ ++G++ A++
Sbjct: 186 PLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQY 245
Query: 118 YKNALYFKPDFPDAYCNLAH 137
YK A+ KP FPDAY NL +
Sbjct: 246 YKEAVKLKPAFPDAYLNLGN 265
Score = 76.2 bits (179), Expect = 6e-14
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 10 NLGNVKREQGKIDEATNLYMKALEVSLIL----------RQLIAIWHPFYSN--KAIGIQ 57
NL + +G++ EAT +AL ++ +L + + H YS +A+ IQ
Sbjct: 160 NLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
P FA A+SN+ E D+ AL +K+A+++ P F DA+ NL ++YK G EAI
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 118 YKNALYFKPDFPDAYCNLA 136
Y++AL +P+ A+ N+A
Sbjct: 280 YQHALQMRPNSAMAFGNIA 298
Score = 70.9 bits (166), Expect = 2e-12
Identities = 35/91 (38%), Positives = 52/91 (57%)
Query: 50 SNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTG 109
+ +A+ IQP+FA+ Y NM N +E D A+ + AIE+ P F+DA NLAS Y G
Sbjct: 110 NEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKG 169
Query: 110 NIKEAIESYKNALYFKPDFPDAYCNLAHCLQ 140
+ EA + + AL P DA+ NL + ++
Sbjct: 170 RLSEATQCCQQALSLNPLLVDAHSNLGNLMK 200
Score = 57.2 bits (132), Expect = 3e-08
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 10 NLGNVKREQGKIDEATNLYMKALEV----SLILRQLIAIWHPF--------YSNKAIGIQ 57
NLGNV + G+ EA Y AL++ ++ + +I++ + +A+
Sbjct: 262 NLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRD 321
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
P+F +AY+N+GN L+++ + A+ C+ + + + P A NL +IY + + A
Sbjct: 322 PRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANLGNIYMEWNMMGPASSL 381
Query: 118 YKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEI 158
+K L + NLA + N+ D + ++ I
Sbjct: 382 FKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVLRI 422
Score = 53.2 bits (122), Expect = 5e-07
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
N+ + +QP A +N+GN E M A + FK + + S NLA IYK GN
Sbjct: 349 NQCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGN 408
Query: 111 IKEAIESYKNALYFKPDFPDAYCN 134
+AI Y L P DA N
Sbjct: 409 YSDAISCYNEVLRIDPLAADALVN 432
Score = 51.2 bits (117), Expect = 2e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
+SN P D +G +LQ+ +A ++A+ I P F++ + N+A+ +K+
Sbjct: 75 HSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEK 134
Query: 109 GNIKEAIESYKNALYFKPDFPDAYCNLA 136
G+ AI Y A+ +P+F DA+ NLA
Sbjct: 135 GDTDRAIRYYLIAIELRPNFADAWSNLA 162
>At3g11540.1 68416.m01407 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 914
Score = 120 bits (288), Expect = 4e-27
Identities = 84/321 (26%), Positives = 153/321 (47%), Gaps = 15/321 (4%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
A P A+A +N+G ++ ++ A+ C++ A+ I P F+ + NL +Y G +
Sbjct: 321 AFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMD 380
Query: 113 EAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWD---DYYERMHNIIEIVNKQLKMDKLS 169
A + A+ P + +A+ NL + N D YE I + ++ ++L
Sbjct: 381 AAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAIDAYEECLKI-DPDSRNAGQNRLL 439
Query: 170 SVHPHHSILYPLTNEARREIATRHANLYIDKLHFLQNTVTFQHPKVMEGRLRIGYVSSDF 229
+++ + L EA R+ R L+ ++ + K E + IGY+S DF
Sbjct: 440 AMNYINEGLDDKLFEAHRDWGWRFTRLH-------PQYTSWDNLKDPERPITIGYISPDF 492
Query: 230 GNHPTSHLMQSIPGSHDRSKVEVFCYA--LNADDGT-TFRRKIVEESENFIDLSCIPCNM 286
H S+ +++ HD +K +V Y+ + AD T FR K++++ + D+ I
Sbjct: 493 FTHSVSYFIEAPLTHHDYTKYKVVVYSAVVKADAKTYRFRDKVLKKGGVWKDIYGID-EK 551
Query: 287 EAATRIHRDGIHILINMNGYTKGARNEIFALKPAPIQVMWLGYPGTSGAGYIDYMITDEV 346
+ A+ + D I IL+ + G+T + A +PAP+QV W+GYP T+G +DY ITD +
Sbjct: 552 KIASMVREDKIDILVELTGHTANNKLGTMACRPAPVQVTWIGYPNTTGLPTVDYRITDSL 611
Query: 347 SAPLSLSEDFSEKFAYMPHTY 367
+ P + E+ +P +
Sbjct: 612 ADPPDTKQKQVEELVRLPDCF 632
Score = 91.5 bits (217), Expect = 2e-18
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 454 LYKIDPRIMESWVTILKLVPNSVLWLLSFPAAGEPNIQKYGLNL---GKDSQTECLTPGR 510
L KI P++++ W IL VPNS L + P + Q++ L G +S+ L P
Sbjct: 663 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSIRQRFLTTLEQLGLESKRVDLLP-L 721
Query: 511 IIFSKIACKEEHVRRGQLADICLDTPLCNGHTTTMDILWTGTPVVTLPGDTLASRVAASQ 570
I+F+ +H++ L DI LDT G TTT + L+ G P VT+ G A V S
Sbjct: 722 ILFN-----HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 776
Query: 571 LTALHCTELIAKNRKHYEDIAIKLGTDSAYRRYIRAKVSKARLESTLFDCEHYARGLESL 630
LT + L+AKN Y +++ L +D +R + S + + +A GLES
Sbjct: 777 LTKVGLGHLVAKNEDEYVQLSVDLASDVTALSKLRMSLRDLMAGSPVCNGPSFAVGLESA 836
Query: 631 YSKMWELYQRGDKP 644
Y MW+ Y +G+ P
Sbjct: 837 YRNMWKKYCKGEVP 850
Score = 69.3 bits (162), Expect = 7e-12
Identities = 32/88 (36%), Positives = 52/88 (59%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+A+ I P +A AY N+G E+ AL+C++KA P +++A+CN+ IYK+ G++
Sbjct: 177 EALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDL 236
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCL 139
+ AI Y+ L P+F A N+A L
Sbjct: 237 EMAITCYERCLAVSPNFEIAKNNMAIAL 264
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y KA+ +ADA N+G E+ A+ ++ A NP ++A NL +YKD
Sbjct: 283 YYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDR 342
Query: 109 GNIKEAIESYKNALYFKPDFPDAYCNL 135
N+ +A+E Y+ AL KP+F + NL
Sbjct: 343 DNLDKAVECYQMALSIKPNFAQSLNNL 369
Score = 52.8 bits (121), Expect = 7e-07
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKD---- 107
KA +P +A+AY NMG + D+ A+ C+++ + ++P F A N+A D
Sbjct: 211 KAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTK 270
Query: 108 ---TGNIKEAIESYKNALYFKPDFPDAYCNL 135
G++ + + YK ALY+ + DA NL
Sbjct: 271 VKLEGDVTQGVAYYKKALYYNWHYADAMYNL 301
Score = 40.7 bits (91), Expect = 0.003
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQ-------DMTGALACFKKAIEINPTFSDAHCNLASI 104
+ + + P F A +NM L +L D+T +A +KKA+ N ++DA NL
Sbjct: 245 RCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDVTQGVAYYKKALYYNWHYADAMYNLGVA 304
Query: 105 YKDTGNIKEAIESYKNALYFKPDFPDAYCNL 135
Y + AI Y+ A +F P +A NL
Sbjct: 305 YGEMLKFDMAIVFYELAFHFNPHCAEACNNL 335
Score = 39.9 bits (89), Expect = 0.005
Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 3 HTCRYTQNLGNVKREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYS------------ 50
H NLG + +++ +D+A Y AL + Q + Y+
Sbjct: 327 HCAEACNNLGVLYKDRDNLDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMDAAASMI 386
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCN--LASIYKDT 108
KAI P +A+A++N+G R+ ++T A+ +++ ++I+P +A N LA Y +
Sbjct: 387 EKAILANPTYAEAFNNLGVLYRDAGNITMAIDAYEECLKIDPDSRNAGQNRLLAMNYINE 446
Query: 109 GNIKEAIESYKN 120
G + E++++
Sbjct: 447 GLDDKLFEAHRD 458
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 59 KFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESY 118
K +A+ G L+ A CF +AI ++P + A + ++K+ G + EA ESY
Sbjct: 75 KNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESY 134
Query: 119 KNALYFKPDFPDAYCNLAHCLQIV 142
+ AL + A A CL IV
Sbjct: 135 QKALMADASYKPA----AECLAIV 154
Score = 35.5 bits (78), Expect = 0.11
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKD--- 107
++AI + P A A ++ G +E + A ++KA+ + ++ A LA + D
Sbjct: 101 SEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMADASYKPAAECLAIVLTDLGT 160
Query: 108 ----TGNIKEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDD 147
GN +E I+ Y AL P + AY NL + +D+
Sbjct: 161 SLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDN 204
>At3g11540.2 68416.m01408 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 732
Score = 118 bits (285), Expect = 9e-27
Identities = 94/368 (25%), Positives = 174/368 (47%), Gaps = 30/368 (8%)
Query: 3 HTCRYTQNLGNVKREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFAD 62
+ C T + G + +E+G++ EA Y KAL A + P AI
Sbjct: 110 NACALT-HCGILHKEEGRLVEAAESYQKALMAD-------ASYKPAAECLAI-------- 153
Query: 63 AYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL 122
+++G +L+ + + + +A++I+P ++ A+ NL +Y + A+ Y+ A
Sbjct: 154 VLTDLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAA 213
Query: 123 YFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMDKLSSVHPHHSILYPLT 182
+P + +AYCN+ I D Y E + I+ ++ ++L +++ + L
Sbjct: 214 LERPMYAEAYCNM-DAGNITMAIDAYEECLK--IDPDSRNAGQNRLLAMNYINEGLDDKL 270
Query: 183 NEARREIATRHANLYIDKLHFLQNTVTFQHPKVMEGRLRIGYVSSDFGNHPTSHLMQSIP 242
EA R+ R L+ ++ + K E + IGY+S DF H S+ +++
Sbjct: 271 FEAHRDWGWRFTRLH-------PQYTSWDNLKDPERPITIGYISPDFFTHSVSYFIEAPL 323
Query: 243 GSHDRSKVEVFCYA--LNADDGT-TFRRKIVEESENFIDLSCIPCNMEAATRIHRDGIHI 299
HD +K +V Y+ + AD T FR K++++ + D+ I + A+ + D I I
Sbjct: 324 THHDYTKYKVVVYSAVVKADAKTYRFRDKVLKKGGVWKDIYGID-EKKIASMVREDKIDI 382
Query: 300 LINMNGYTKGARNEIFALKPAPIQVMWLGYPGTSGAGYIDYMITDEVSAPLSLSEDFSEK 359
L+ + G+T + A +PAP+QV W+GYP T+G +DY ITD ++ P + E+
Sbjct: 383 LVELTGHTANNKLGTMACRPAPVQVTWIGYPNTTGLPTVDYRITDSLADPPDTKQKQVEE 442
Query: 360 FAYMPHTY 367
+P +
Sbjct: 443 LVRLPDCF 450
Score = 91.5 bits (217), Expect = 2e-18
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 454 LYKIDPRIMESWVTILKLVPNSVLWLLSFPAAGEPNIQKYGLNL---GKDSQTECLTPGR 510
L KI P++++ W IL VPNS L + P + Q++ L G +S+ L P
Sbjct: 481 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSIRQRFLTTLEQLGLESKRVDLLP-L 539
Query: 511 IIFSKIACKEEHVRRGQLADICLDTPLCNGHTTTMDILWTGTPVVTLPGDTLASRVAASQ 570
I+F+ +H++ L DI LDT G TTT + L+ G P VT+ G A V S
Sbjct: 540 ILFN-----HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 594
Query: 571 LTALHCTELIAKNRKHYEDIAIKLGTDSAYRRYIRAKVSKARLESTLFDCEHYARGLESL 630
LT + L+AKN Y +++ L +D +R + S + + +A GLES
Sbjct: 595 LTKVGLGHLVAKNEDEYVQLSVDLASDVTALSKLRMSLRDLMAGSPVCNGPSFAVGLESA 654
Query: 631 YSKMWELYQRGDKP 644
Y MW+ Y +G+ P
Sbjct: 655 YRNMWKKYCKGEVP 668
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 59 KFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESY 118
K +A+ G L+ A CF +AI ++P + A + ++K+ G + EA ESY
Sbjct: 75 KNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESY 134
Query: 119 KNALYFKPDFPDAYCNLAHCLQIV 142
+ AL + A A CL IV
Sbjct: 135 QKALMADASYKPA----AECLAIV 154
Score = 35.5 bits (78), Expect = 0.11
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSD-AHC------NLAS 103
++AI + P A A ++ G +E + A ++KA+ + ++ A C +L +
Sbjct: 101 SEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMADASYKPAAECLAIVLTDLGT 160
Query: 104 IYKDTGNIKEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDD 147
K GN +E I+ Y AL P + AY NL + +D+
Sbjct: 161 SLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDN 204
>At1g05150.1 68414.m00518 calcium-binding EF hand family protein low
similarity to O-linked GlcNAc transferase [Homo sapiens]
GI:2266994; contains Pfam profiles PF00036: EF hand,
PF00515: TPR Domain
Length = 808
Score = 54.0 bits (124), Expect = 3e-07
Identities = 31/118 (26%), Positives = 58/118 (49%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI ++P +ADA+ ++ ++L + + A+ F++AI++ P DA NL +Y D G
Sbjct: 369 EAIYLKPDYADAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRF 428
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMDKLS 169
+ A E Y L P+ A N A L ++ + +++ N+ D +S
Sbjct: 429 QRASEMYTRVLTVWPNHWRAQLNKAVSLLGAGETEEAKRALKEALKLTNRVELHDAIS 486
Score = 51.6 bits (118), Expect = 2e-06
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y +A + P A +G+ L + + A+ ++AI + P ++DAHC+LAS
Sbjct: 332 YYREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSM 391
Query: 109 GNIKEAIESYKNALYFKPDFPDAYCNL 135
G + AIE ++ A+ KP DA NL
Sbjct: 392 GEDERAIEVFQRAIDLKPGHVDALYNL 418
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 64 YSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALY 123
Y N+G L + A +++A + PT A L S G + A+++ + A+Y
Sbjct: 313 YVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIY 372
Query: 124 FKPDFPDAYCNLAHCL 139
KPD+ DA+C+LA L
Sbjct: 373 LKPDYADAHCDLASSL 388
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 62 DAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNA 121
D + +G L E Q AL FK+A E+ PT H + G KE+ + + A
Sbjct: 235 DGHMAIGRVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGKCKESKDEFLLA 294
Query: 122 L 122
L
Sbjct: 295 L 295
>At2g32450.1 68415.m03964 calcium-binding EF hand family protein low
similarity to O-linked GlcNAc transferase [Homo sapiens]
GI:2266994; contains Pfam profiles PF00036: EF hand,
PF00515: TPR Domain
Length = 802
Score = 52.8 bits (121), Expect = 7e-07
Identities = 31/118 (26%), Positives = 58/118 (49%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI ++P +ADA+ ++ ++L + + A+ F++AI++ P DA NL +Y D G
Sbjct: 364 EAIYLKPDYADAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRF 423
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMDKLS 169
+ A E Y L P+ A N A L ++ + +++ N+ D +S
Sbjct: 424 QRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRALKEALKMTNRVELHDAVS 481
Score = 50.8 bits (116), Expect = 3e-06
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y +A + P A +G+ L + + A+ ++AI + P ++DAHC+LAS
Sbjct: 327 YYREAAILCPTHYRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAM 386
Query: 109 GNIKEAIESYKNALYFKPDFPDAYCNL 135
G + AIE ++ A+ KP DA NL
Sbjct: 387 GEDERAIEVFQRAIDLKPGHVDALYNL 413
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 64 YSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALY 123
Y N+G +L + A +++A + PT A L S G + A+++ + A+Y
Sbjct: 308 YVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLGSALFGVGEYRAAVKALEEAIY 367
Query: 124 FKPDFPDAYCNLAHCL 139
KPD+ DA+C+LA L
Sbjct: 368 LKPDYADAHCDLASSL 383
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 62 DAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNA 121
D + +G L E Q AL FK+A E+ PT H + G KE+ + + A
Sbjct: 230 DGHMAIGKVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGKYKESKDEFLLA 289
Query: 122 L 122
L
Sbjct: 290 L 290
>At5g17270.1 68418.m02023 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 899
Score = 49.6 bits (113), Expect = 6e-06
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
A+ + + D + +G + +D+ AL F A++++P +A N+A ++ K
Sbjct: 600 AMALNSLYPDGWFALGAAALKARDVQKALDAFTFAVQLDPDNGEAWNNIACLHMIKKKSK 659
Query: 113 EAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMD 166
E+ ++K AL FK D + N +H V N D +E + I++ ++K ++D
Sbjct: 660 ESFIAFKEALKFKRDSWQMWENFSHVAMDVGNIDQAFEAIQQILK-MSKNKRVD 712
>At3g48150.1 68416.m05251 cell division cycle family protein / CDC
family protein similar to cell division cycle protein 23
[Homo sapiens] GI:3283051, anaphase-promoting complex
subunit 8 [Homo sapiens] GI:6180017; contains Pfam
profile PF00515: TPR Domain
Length = 579
Score = 49.2 bits (112), Expect = 8e-06
Identities = 23/92 (25%), Positives = 49/92 (53%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y +A+ + K+ A++ MG+ E+++ A+ +++A++INPT A L Y+
Sbjct: 361 YFRRALKLNKKYLSAWTLMGHEYVEMKNTPAAIDAYRRAVDINPTDYRAWYGLGQAYEMM 420
Query: 109 GNIKEAIESYKNALYFKPDFPDAYCNLAHCLQ 140
G A+ ++ +++F P+ + +A C Q
Sbjct: 421 GMPFYALHYFRKSIFFLPNDSRLWIAMAKCYQ 452
>At5g37130.1 68418.m04457 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 856
Score = 47.6 bits (108), Expect = 3e-05
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
A+ + ++D + +G + +D+ AL F A+ ++P A N+AS++ K
Sbjct: 571 AMALNSLYSDGWFALGAAALKARDLQKALDAFTLAVHLDPDNWLAWNNIASLHMIKKKSK 630
Query: 113 EAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIV-NKQLK---MDKL 168
E+ ++K L D + N +H V N D +E + I+ + NK + +D+L
Sbjct: 631 ESFIAFKEVLKLNRDSWQIWENFSHVAMDVGNTDQAFEAIQQIMRLTQNKSISVVLLDRL 690
Query: 169 SSVHPHHSILY-PLTNEARREIATRHANLYID 199
+ + +I Y +NE + T LYI+
Sbjct: 691 MTDLENRNISYESSSNELIKTKPTTTERLYIE 722
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 44.8 bits (101), Expect = 2e-04
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
+K + +P + +A G +++ A+A F KAI+ NP S+A G
Sbjct: 321 DKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQSNPAASEAWKRRGQARAALGE 380
Query: 111 IKEAIESYKNALYFKPDFPD 130
EA+E AL F+P+ PD
Sbjct: 381 YVEAVEDLTKALVFEPNSPD 400
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/113 (18%), Positives = 48/113 (42%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
KA+ +P D G + +D T A+ ++ A+ L + G
Sbjct: 390 KALVFEPNSPDVLHERGIVNFKSKDFTAAVKDLSICLKQEKDNKSAYTYLGLAFASLGEY 449
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLK 164
K+A E++ ++ ++ +A+ +LA Q + + E + ++++ N+ K
Sbjct: 450 KKAEEAHLKSIQLDSNYLEAWLHLAQFYQELADHCKALECIEQVLQVDNRVWK 502
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 41.9 bits (94), Expect = 0.001
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI + P YSN + L AL+ KK IE+ P +S + L + +
Sbjct: 27 EAINLSPTNHILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIGLSKF 86
Query: 112 KEAIESYKNALYFKP 126
EA++SYK L P
Sbjct: 87 DEAVDSYKKGLEIDP 101
Score = 39.1 bits (87), Expect = 0.009
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 61 ADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKN 120
A+ + GN D A+ F +AI ++PT + N ++ Y +EA+ K
Sbjct: 2 AEEAKSKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAKK 61
Query: 121 ALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEI--VNKQLK 164
+ KPD+ Y L + +D+ + +EI N+ LK
Sbjct: 62 TIELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLK 107
Score = 34.3 bits (75), Expect = 0.26
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
P A+ GN + Q A+ + +AI+ NP A+ N A+ Y G + E ++
Sbjct: 366 PTIAEEEREKGNGFFKEQKYPEAVKHYSEAIKRNPNDVRAYSNRAACYTKLGALPEGLKD 425
Query: 118 YKNALYFKPDFPDAY 132
+ + P F Y
Sbjct: 426 AEKCIELDPSFTKGY 440
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
++AI P AYSN +L + L +K IE++P+F+ + +I
Sbjct: 393 SEAIKRNPNDVRAYSNRAACYTKLGALPEGLKDAEKCIELDPSFTKGYSRKGAIQFFMKE 452
Query: 111 IKEAIESYKNALYFKPDFPDAYCNLAHCLQ 140
+A+E+Y+ L P + + C++
Sbjct: 453 YDKAMETYQEGLKHDPKNQEFLDGVRRCVE 482
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 50 SNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPT 93
+ K I ++P ++ YS +G L A+ +KK +EI+P+
Sbjct: 59 AKKTIELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPS 102
>At5g10090.1 68418.m01169 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 594
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
AI I PK A SN L L + A+ ++AI I+P + AH LA++Y G ++
Sbjct: 263 AISIDPKKASYRSNKSAALTALGRILEAVFECREAIRIDPHYHRAHHRLANLYLRLGEVE 322
Query: 113 EAIESYKNA 121
+I +K+A
Sbjct: 323 NSIYHFKHA 331
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 67 MGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKP 126
MGN + + ALA ++ AI I+P + N ++ G I EA+ + A+ P
Sbjct: 243 MGNEDYKNGNFAEALALYEAAISIDPKKASYRSNKSAALTALGRILEAVFECREAIRIDP 302
Query: 127 DFPDAYCNLAH 137
+ A+ LA+
Sbjct: 303 HYHRAHHRLAN 313
Score = 29.5 bits (63), Expect = 7.3
Identities = 19/84 (22%), Positives = 32/84 (38%)
Query: 63 AYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL 122
A + GN + A + + ++ + S CN A+ G A+E AL
Sbjct: 473 AARSRGNDFFKAGRFQEACTAYGEGLDHDSRNSVLLCNRAACLSKMGQFDRAVEDTSAAL 532
Query: 123 YFKPDFPDAYCNLAHCLQIVCNWD 146
+P + A A C + NW+
Sbjct: 533 AVRPGYTKARLRRADCNAKLGNWE 556
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 48 FYSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKD 107
FY +AI PK +SN L L + A ++A+ +NPT+ AH LAS+
Sbjct: 181 FYE-RAISADPKTPTYWSNKSAALISLGRLLEASDACEEALRLNPTYERAHQRLASLQLR 239
Query: 108 TGNIKEAIESYKNA 121
G +++A+ Y A
Sbjct: 240 LGEVEKALCHYNEA 253
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y++ I I + GN + AL + +AIE++P+ + H N A+
Sbjct: 246 YTSWKIAIYGSNPEEVKRFGNEMFRKGCFAEALKLYDRAIELSPSNATYHSNRAAALSSL 305
Query: 109 GNIKEAIESYKNALYFKPDFPDAYCNLAHCL 139
G I EA+ + A+ P+F A+ LA L
Sbjct: 306 GQIGEAVNECEIAIKLDPNFARAHHRLASLL 336
Score = 33.5 bits (73), Expect = 0.45
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
++AI + P A +SN L L + A+ + AI+++P F+ AH LAS+ G
Sbjct: 282 DRAIELSPSNATYHSNRAAALSSLGQIGEAVNECEIAIKLDPNFARAHHRLASLLLRLGY 341
Query: 111 IKEA 114
+ A
Sbjct: 342 VDNA 345
Score = 32.3 bits (70), Expect = 1.0
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 68 GNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPD 127
GN L EL+ T A + + + ++ +P+ + C A + G + +IE +AL P
Sbjct: 503 GNDLYELERYTEARSAYAEGLKYDPSNATLLCYRADCFFKVGMWESSIEDCNHALLILPS 562
Query: 128 FPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMDK 167
+ A + W + + EI+ K+L DK
Sbjct: 563 YTKPRLQRAALYTKLERWAEAV----SDYEILRKELPYDK 598
>At2g42810.1 68415.m05300 serine/threonine protein phosphatase,
putative similar to SP|P53042 Serine/threonine protein
phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase
T) (PPT) {Rattus norvegicus}; contains Pfam profiles
PF00149: Ser/Thr protein phosphatase, PF00515: TPR
Domain
Length = 484
Score = 40.7 bits (91), Expect = 0.003
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
KAI + A ++N +L++ A+ KAIE++ +S + + Y G
Sbjct: 38 KAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKF 97
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIV 142
K+A++ ++ P+ PDA L C + V
Sbjct: 98 KDALKDFQQVKRLSPNDPDATRKLKECEKAV 128
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 39.9 bits (89), Expect = 0.005
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI P AYSN + +L M L +K IE++PTFS + A++
Sbjct: 408 EAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDAEKCIELDPTFSKGYSRKAAVQFFLKEY 467
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQ 140
A+E+Y+ L P + + C+Q
Sbjct: 468 DNAMETYQAGLEHDPSNQELLDGVKRCVQ 496
Score = 37.5 bits (83), Expect = 0.028
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
PK D GN + Q A+ + +AI+ NP A+ N A+ Y G + E ++
Sbjct: 380 PKLGDEEREKGNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKD 439
Query: 118 YKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYE 150
+ + P F Y A + +D+ E
Sbjct: 440 AEKCIELDPTFSKGYSRKAAVQFFLKEYDNAME 472
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 68 GNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPD 127
GN D T A+ F +AI + PT N ++ + EA+ K + KP
Sbjct: 9 GNAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEALSDAKETIKLKPY 68
Query: 128 FPDAYCNL 135
+P Y L
Sbjct: 69 WPKGYSRL 76
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 67 MGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL 122
+GN + +D A+ + AIEI+ N A++Y + G E IE A+
Sbjct: 250 LGNAAYKKKDFETAIQHYSTAIEIDDEDISYLTNRAAVYLEMGKYNECIEDCNKAV 305
>At5g63200.1 68418.m07935 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P28290 Sperm-specific
antigen 2 (Cleavage signal-1 protein) (CS-1) Homo
sapiens; contains Pfam profile PF00515: TPR Domain
Length = 649
Score = 39.1 bits (87), Expect = 0.009
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHC---NLASIY 105
Y A+G + + A+SN+G +L+ + + A +K+A+ ++ AH NL ++Y
Sbjct: 505 YLKAAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALTVSKE-DQAHAILSNLGNLY 563
Query: 106 KDTGNIKEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDD 147
+ + + + AL KP + AY NL W++
Sbjct: 564 RQKKQYEVSKAMFSKALELKPGYAPAYNNLGLVFVAERRWEE 605
Score = 35.9 bits (79), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 65 SNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL 122
SN+GN R+ + + A F KA+E+ P ++ A+ NL ++ +EA ++ +L
Sbjct: 557 SNLGNLYRQKKQYEVSKAMFSKALELKPGYAPAYNNLGLVFVAERRWEEAKSCFEKSL 614
Score = 34.7 bits (76), Expect = 0.19
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNL 101
+KA+ ++P +A AY+N+G + A +CF+K++E + A NL
Sbjct: 577 SKALELKPGYAPAYNNLGLVFVAERRWEEAKSCFEKSLEADSLLDAAQSNL 627
>At2g29670.1 68415.m03606 expressed protein
Length = 536
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTL-RELQDMTGALACFKKAIEINPTFSDAHCNLASIYKD 107
Y +A+G++PK A+A+S L R D+ A F +AI+ +PT S N A+ +
Sbjct: 458 YFKRAVGVEPKDAEAFSKYATFLWRARDDLWAAEETFLEAIDADPTNSYYAANYANFLWN 517
Query: 108 TG 109
TG
Sbjct: 518 TG 519
>At1g78770.1 68414.m09180 cell division cycle family protein similar
to cell division cycle protein GI:603230 from [Homo
sapiens]; contains Pfam profile PF00515 TPR Domain
148977 (apparently not full-length).
Length = 543
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 66 NMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFK 125
N+ + R+L+ A++ +++A+ ++ + LA Y GN AI Y AL+ K
Sbjct: 455 NLAHAYRKLRKDREAISYYERALTLSTKSLSTYSGLAYTYHLQGNFSAAISYYHKALWLK 514
Query: 126 PDFPDAYC 133
PD D +C
Sbjct: 515 PD--DQFC 520
>At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containing
protein glutamine-rich tetratricopeptide repeat (TPR)
containing protein (SGT) - Rattus
norvegicus,PID:e1285298 (SP|O70593); contains Pfam
profile PF00515 TPR Domain
Length = 426
Score = 38.7 bits (86), Expect = 0.012
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
AI + K A Y N ++ + A+ K+IEI+P +S A+ L Y G
Sbjct: 201 AIALTDKNAVFYCNRAAAYTQINMCSEAIKDCLKSIEIDPNYSKAYSRLGLAYYAQGKYA 260
Query: 113 EAIE-SYKNALYFKP 126
EAIE +K AL P
Sbjct: 261 EAIEKGFKKALLLDP 275
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI PK AYSN +L M L +K IE++PTF + ++
Sbjct: 407 EAIKRNPKDPRAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFLKGYSRKGAVQFFMKEY 466
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQ 140
A+E+Y+ L P+ + + C+Q
Sbjct: 467 DNAMETYQKGLEHDPNNQELLDGVKRCVQ 495
Score = 34.7 bits (76), Expect = 0.19
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
AI + P +SN L AL+ KK +E+ P + + L + +
Sbjct: 28 AINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVELKPDWGKGYSRLGAAHLGLNQFD 87
Query: 113 EAIESYKNALYFKP 126
EA+E+Y L P
Sbjct: 88 EAVEAYSKGLEIDP 101
Score = 34.3 bits (75), Expect = 0.26
Identities = 24/98 (24%), Positives = 37/98 (37%)
Query: 61 ADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKN 120
AD GN D A+ F AI + PT N ++ + + EA+ K
Sbjct: 2 ADEAKAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKK 61
Query: 121 ALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEI 158
+ KPD+ Y L + +D+ E +EI
Sbjct: 62 TVELKPDWGKGYSRLGAAHLGLNQFDEAVEAYSKGLEI 99
Score = 33.5 bits (73), Expect = 0.45
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 58 PKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIES 117
P D GN + Q A+ + +AI+ NP A+ N A+ Y G + E ++
Sbjct: 379 PNIGDEEREKGNDFFKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAACYTKLGAMPEGLKD 438
Query: 118 YKNALYFKPDFPDAY 132
+ + P F Y
Sbjct: 439 AEKCIELDPTFLKGY 453
>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal
domain-containing protein similarity to
TETRATRICOPEPTIDE REPEAT PROTEIN 2 , human,
SWISSPROT:TTC2_HUMAN; contains Pfam profiles PF00226:
DnaJ domain, PF00515: TPR Domain
Length = 1165
Score = 37.5 bits (83), Expect = 0.028
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 68 GNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPD 127
G ++ T ALAC +E P + CN A+ YK G +AI A+ +
Sbjct: 893 GRHTEAVEHYTAALAC---NVESRPFTAVCFCNRAAAYKALGQFSDAIADCSLAIALDQN 949
Query: 128 FPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLK 164
+ A A +++ ++ M + I+ KQ++
Sbjct: 950 YSKAISRRATLFEMIRDYGQAASDMERYVNILTKQME 986
>At2g20000.1 68415.m02338 cell division cycle family protein / CDC
family protein low similarity to SP|P30260|CC27_HUMAN
Protein CDC27Hs (Cell division cycle protein 27 homolog)
Homo sapiens; contains Pfam profile PF00515: TPR Domain
Length = 744
Score = 37.5 bits (83), Expect = 0.028
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 67 MGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL 122
MGN +D AL F +A+++NP F+ AH Y + + ++SY+NAL
Sbjct: 524 MGNCYSLQKDHETALKNFLRAVQLNPRFAYAHTLCGHEYTTLEDFENGMKSYQNAL 579
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+A+ + P+FA A++ G+ L+D + ++ A+ ++ +A L IY +
Sbjct: 543 RAVQLNPRFAYAHTLCGHEYTTLEDFENGMKSYQNALRVDTRHYNAWYGLGMIYLRQEKL 602
Query: 112 KEAIESYKNALYFKP 126
+ + ++ A P
Sbjct: 603 EFSEHHFRMAFLINP 617
>At1g76630.1 68414.m08916 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile: PF00515 TPR Domain (5
copies)
Length = 1064
Score = 36.7 bits (81), Expect = 0.048
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 8/108 (7%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+A+ + A A++ MG RE +M A F A I+PT + A Y
Sbjct: 406 RALHLDVSLAVAWAFMGQIFRESDEMKFAKQAFDCARSIDPTLALPWAGSADTYARESTS 465
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIV 159
EA ES A P F C++ YY HN+ +V
Sbjct: 466 DEAFESCLRAAQISPIFA--------CIEQAVQRSPYYPEPHNLHGLV 505
Score = 32.7 bits (71), Expect = 0.78
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 58 PKFADAYSNMGNTL-RELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIE 116
P A A+ +G+ R D+ A C+++A+ INP SD+ L ++ G I
Sbjct: 49 PNNAVAFKYLGHYYSRVTLDLNRAAKCYQRAVLINPNDSDSGEALCDLFDRQGKEILEIA 108
Query: 117 SYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNII 156
++A P A+C L + W + + + + I
Sbjct: 109 VCRDASEKSPKAFWAFCRLGYIQLHQKKWSEAVQSLQHAI 148
>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 593
Score = 36.3 bits (80), Expect = 0.064
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 53 AIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIK 112
AI I P A SN L L + A+ ++AI I P + AH L ++Y G ++
Sbjct: 262 AIAIDPNKAAYRSNKSAALTALGRILDAVFECREAIRIEPHYHRAHHRLGNLYLRLGEVE 321
Query: 113 EAIESYKNA 121
++I +K++
Sbjct: 322 KSIYHFKHS 330
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 68 GNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPD 127
GN L + A A + + ++ +P S CN A+ G ++IE AL +P
Sbjct: 477 GNELFKSGRFQEACAAYGEGLDHDPRNSVLLCNRAACRSKLGQFDKSIEDCTAALSVRPG 536
Query: 128 FPDAYCNLAHCLQIVCNWD 146
+ A A C + W+
Sbjct: 537 YGKARLRRADCNAKIEKWE 555
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 35.5 bits (78), Expect = 0.11
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
++AI I P A SN L L+ + A+ +A+ I+P++S AH LAS+Y G
Sbjct: 244 DRAILISPGNAAYRSNRAAALTALRRLGEAVKECLEAVRIDPSYSRAHQRLASLYLRLGE 303
Query: 111 IKEA 114
+ A
Sbjct: 304 AENA 307
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/83 (28%), Positives = 34/83 (40%)
Query: 49 YSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDT 108
Y NKA I + G L ++ AL FK ++ P A AS+ +
Sbjct: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNR 175
Query: 109 GNIKEAIESYKNALYFKPDFPDA 131
G E+++ YK AL P P A
Sbjct: 176 GRFSESLQLYKRALQVFPGCPAA 198
Score = 34.7 bits (76), Expect = 0.19
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 59 KFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESY 118
+F Y +G +L ++ G++ F+K +E+ P + L +Y G ++A+E
Sbjct: 314 EFVFPYFGLGQVQLKLGELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYM 373
Query: 119 KNALYFKPDFPDAYCNLAHCL 139
+ A P A+ L L
Sbjct: 374 RKATKLDPRDAQAFVGLGELL 394
>At3g47840.1 68416.m05215 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 706
Score = 35.1 bits (77), Expect = 0.15
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 85 KKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKN 120
++ +E++PT + A LA+IY TGN++EA KN
Sbjct: 604 ERILELDPTCATALVTLANIYSSTGNLEEAANVRKN 639
>At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containing
protein low similarity to protein antigen LmSTI1
[Leishmania major] GI:1698880; contains Pfam profile
PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come
from this gene
Length = 328
Score = 35.1 bits (77), Expect = 0.15
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI + P A YSN L ++ ALA + I++NP + + + +
Sbjct: 40 QAIKLDPSNATLYSNRAAAFLSLVKLSKALADAETTIKLNPQWEKGYFRKGCVLEAMEKY 99
Query: 112 KEAIESYKNALYFKP 126
++A+ +++ AL + P
Sbjct: 100 EDALAAFEMALQYNP 114
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 34.7 bits (76), Expect = 0.19
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 59 KFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESY 118
+F Y +G +L ++ G++ F+K +E+ P + L +Y G ++A+E
Sbjct: 102 EFVFPYFGLGQVQLKLGELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYM 161
Query: 119 KNALYFKPDFPDAYCNLAHCL 139
+ A P A+ L L
Sbjct: 162 RKATKLDPRDAQAFVGLGELL 182
>At5g56290.1 68418.m07026 peroxisomal targeting signal type 1
receptor (PEX5) identical to GI:3603353; contains Pfam
profile PF00515 TPR Domain
Length = 728
Score = 33.5 bits (73), Expect = 0.45
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 84 FKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPD 127
F +A ++NP +D H L +Y + AI S++ AL KP+
Sbjct: 579 FNEASQLNPEDADVHIVLGVLYNLSREFDRAITSFQTALQLKPN 622
>At4g23570.2 68417.m03396 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002:
SGS domain, PF04969: CS domain
Length = 350
Score = 33.5 bits (73), Expect = 0.45
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAH 98
+KAI + P A+ +++ +L+ T A+A KAIE++P+ + A+
Sbjct: 26 SKAIDLDPNCAEFFADRAQAYIKLESFTEAVADANKAIELDPSLTKAY 73
>At4g23570.1 68417.m03395 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002:
SGS domain, PF04969: CS domain
Length = 350
Score = 33.5 bits (73), Expect = 0.45
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAH 98
+KAI + P A+ +++ +L+ T A+A KAIE++P+ + A+
Sbjct: 26 SKAIDLDPNCAEFFADRAQAYIKLESFTEAVADANKAIELDPSLTKAY 73
>At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein contains Pfam profiles PF00564:
PB1 domain, PF00515: TPR Domain
Length = 809
Score = 33.1 bits (72), Expect = 0.59
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 61 ADAYSNMGNTLRELQDMTGALACFKKAIEINP----TFSDAHCNLASIYK--DTGNIKEA 114
A GN L + +D GA+ + +AI+I P S N+AS Y + G +A
Sbjct: 126 AQGLKEEGNKLFQKRDYDGAMFKYGEAIKILPKDHVEVSHVRANVASCYMQLEPGEFAKA 185
Query: 115 IESYKNALYFKPDFPDAYCNLAHCLQIVCNWD 146
I AL PD A A C + + D
Sbjct: 186 IHECDLALSVTPDHNKALLKRARCYEALNKLD 217
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 32.7 bits (71), Expect = 0.78
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 68 GNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPD 127
GN L + + T A + + + + ++P + +CN A+ + G + +IE AL ++P
Sbjct: 472 GNDLYKSERYTEASSAYAEGLRLDPCNAILYCNRAACWFKLGMWERSIEDCNQALRYQPS 531
Query: 128 F 128
+
Sbjct: 532 Y 532
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/76 (23%), Positives = 36/76 (47%)
Query: 61 ADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKN 120
++ +GN + AL + +AI ++PT + N A+ I EA++ ++
Sbjct: 227 SEEVKRVGNEMYRKGLFNEALKLYDRAIALSPTNAAYRSNRAAALIGLSRIGEAVKECED 286
Query: 121 ALYFKPDFPDAYCNLA 136
A+ P++ A+ LA
Sbjct: 287 AVRSDPNYGRAHHRLA 302
>At4g10840.2 68417.m01764 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 531
Score = 32.3 bits (70), Expect = 1.0
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 15 KREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFADAYSNMGNTLREL 74
+R I EA Y ALE L+L + I S A I + Y ++ +
Sbjct: 270 RRLMAIICEAKGDYENALE-HLVLASMAMIASGQESEVA-SIDVSIGNIYMSLCRFDEAV 327
Query: 75 QDMTGALACFKKAI-EINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL--YFKP 126
AL FK + E +PT + LA +Y TG ++E+ +NAL Y KP
Sbjct: 328 FSYQKALTVFKASKGETHPTVASVFVRLAELYHRTGKLRESKSYCENALRIYNKP 382
>At4g10840.1 68417.m01765 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 609
Score = 32.3 bits (70), Expect = 1.0
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 15 KREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFADAYSNMGNTLREL 74
+R I EA Y ALE L+L + I S A I + Y ++ +
Sbjct: 270 RRLMAIICEAKGDYENALE-HLVLASMAMIASGQESEVA-SIDVSIGNIYMSLCRFDEAV 327
Query: 75 QDMTGALACFKKAI-EINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL--YFKP 126
AL FK + E +PT + LA +Y TG ++E+ +NAL Y KP
Sbjct: 328 FSYQKALTVFKASKGETHPTVASVFVRLAELYHRTGKLRESKSYCENALRIYNKP 382
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 68 GNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPD 127
GN + + ALA + +AI ++P N A+ +G ++EA++ A+ P
Sbjct: 218 GNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRCDPS 277
Query: 128 FPDAYCNLA 136
+ A+ LA
Sbjct: 278 YARAHQRLA 286
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGN 110
++AI + P+ SN L + A+ +A+ +P+++ AH LAS+Y G
Sbjct: 235 DRAISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRCDPSYARAHQRLASLYLRLGE 294
Query: 111 IKEA 114
+ A
Sbjct: 295 AENA 298
>At4g11260.1 68417.m01822 phosphatase-related low similarity to
protein phosphatase T [Saccharomyces cerevisiae]
GI:897806; contains Pfam profiles PF00515: TPR Domain,
PF05002: SGS domain, PF04969: CS domain
Length = 358
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 50 SNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINP 92
+NKAI ++P A AY G +L++ + A A +K + P
Sbjct: 59 ANKAIELEPTLAKAYLRKGTACMKLEEYSTAKAALEKGASVAP 101
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 51 NKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAH 98
+KAI + P A +++ ++ + T A+ KAIE+ PT + A+
Sbjct: 26 SKAIDLDPNCAAFFADRAQANIKIDNFTEAVVDANKAIELEPTLAKAY 73
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 62 DAYSNMGNTLRELQD--MTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYK 119
DA S + + D A+ KA+ +NPT + + AS++ AI
Sbjct: 111 DAQSEKSKAMEAISDGRFDEAIEHLTKAVMLNPTSAILYATRASVFLKVKKPNAAIRDAN 170
Query: 120 NALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMH 153
AL F D Y + ++ W++ +H
Sbjct: 171 VALQFNSDSAKGYKSRGMAKAMLGQWEEAAADLH 204
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 80 ALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKPDFPDAYCNLAHCL 139
A+ +AI +NPT + + N AS+Y AI AL PD Y +
Sbjct: 142 AIEHLTRAITLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDSAKGYKSRGMAR 201
Query: 140 QIVCNWDDYYERMH 153
++ W + + +H
Sbjct: 202 AMLGEWAEAAKDLH 215
>At3g16320.1 68416.m02061 cell division cycle family protein / CDC
family protein similar to SP|P30260|CC27_HUMAN Protein
CDC27Hs (Cell division cycle protein 27 homolog) Homo
sapiens, C-terminus similar to C-term of cell division
control protein 27 SP:P38042 (Saccharomyces cerevisiae);
contains Pfam profile PF00515 TPR Domain
Length = 727
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 48 FYSNKAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKD 107
+ + + I + +++ +GN +D AL F++AI++N F+ AH +
Sbjct: 486 YLAQELISVDRLSPESWCAVGNCYSLRKDHDTALKMFQRAIQLNERFTYAHTLCGHEFAA 545
Query: 108 TGNIKEAIESYKNAL 122
++A Y+ AL
Sbjct: 546 LEEFEDAERCYRKAL 560
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
+AI + +F A++ G+ L++ A C++KA+ I+ +A L Y
Sbjct: 524 RAIQLNERFTYAHTLCGHEFAALEEFEDAERCYRKALGIDTRHYNAWYGLGMTYLRQEKF 583
Query: 112 KEAIESYKNALYFKP 126
+ A ++ AL P
Sbjct: 584 EFAQHQFQLALQINP 598
Score = 29.5 bits (63), Expect = 7.3
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Query: 52 KAIGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
KA+GI + +A+ +G T + A F+ A++INP S C ++
Sbjct: 558 KALGIDTRHYNAWYGLGMTYLRQEKFEFAQHQFQLALQINPRSSVIMCYYGIALHESKRN 617
Query: 112 KEAIESYKNALYFKPDFPDAYCNLAHCLQIVCNWDDYYERMHNIIEIVNKQLKMDKLSSV 171
EA+ + A+ P AH I+ + DY+ + ++E + + + SSV
Sbjct: 618 DEALMMMEKAVLTDAKNPLPKYYKAH---ILTSLGDYH-KAQKVLEELKECAPQE--SSV 671
Query: 172 HPHHSILY 179
H +Y
Sbjct: 672 HASLGKIY 679
>At5g44330.1 68418.m05428 male sterility MS5 family protein similar
to male sterility MS5 [Arabidopsis thaliana] GI:3859112;
contains Pfam profile PF00515 TPR Domain
Length = 469
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 100 NLASIYKDTGNIKEAIESYKNALYFKPDFPDAYCNLAHCL 139
NLA ++ N A + Y+NAL +PD + CNLA CL
Sbjct: 189 NLAWVHLQLHNYGIAEQYYRNALSLEPD-NNKLCNLAICL 227
>At3g62890.1 68416.m07065 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 72 RELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALY 123
R L D+ K+ IE++P S A+ L+++Y TG E I Y
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEGINKVPGCSY 432
>At2g36690.1 68415.m04501 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to IDS3 [Hordeum
vulgare][GI:4514655], leucoanthocyanidin dioxygenase
[SP|P51091][Malus domestica]; contains PF03171
2OG-Fe(II) oxygenase superfamily domain
Length = 366
Score = 30.3 bits (65), Expect = 4.2
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 319 PAPIQVMWLGYPGTSGAGYIDYMITDEVSAPLSLSEDFSEKFAYMPHTYF--VGDHKKMF 376
P P + LG P S G++ ++ DEV L D +P ++ VGDH ++F
Sbjct: 226 PCPEPELTLGMPPHSDYGFLTLLLQDEVEGLQILYRDEWVTVDPIPGSFVVNVGDHLEIF 285
Query: 377 PHLKTK---YKVLIDNNSIAHENVALINS 402
+ + K ++VL+ N++ +VA ++S
Sbjct: 286 SNGRYKSVLHRVLV-NSTKPRISVASLHS 313
>At1g27500.1 68414.m03352 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 650
Score = 30.3 bits (65), Expect = 4.2
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 15 KREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFADAYSNMGNTLREL 74
+R G I E + ALE L+L + + S A + D+Y ++ +
Sbjct: 322 RRLMGLICETKGDHENALE-HLVLASMAMAANGQESEVAF-VDTSIGDSYLSLSRFDEAI 379
Query: 75 QDMTGALACFKKAI-EINPTFSDAHCNLASIYKDTGNIKEAIESYKNAL 122
+L K A E +P + LA +Y TG ++EA +NAL
Sbjct: 380 CAYQKSLTALKTAKGENHPAVGSVYIRLADLYNRTGKVREAKSYCENAL 428
Score = 29.9 bits (64), Expect = 5.5
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 21 IDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFADAYSNMG---NTLRELQDM 77
I+EA L+ +A IL Q +HP + +G+ A AY +G + ++ L +
Sbjct: 543 IEEAVELFEEA---KCILEQECGPYHP----ETLGLYSNLAGAYDAIGRLDDAIKLLGHV 595
Query: 78 TGALACFKKAIEINPTFSDAHCNLASIYKDTGNI 111
G +K NP D LA + K+ GN+
Sbjct: 596 VGVRE--EKLGTANPVTEDEKRRLAQLLKEAGNV 627
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 29.9 bits (64), Expect = 5.5
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 12 GNVKREQGKIDEATNLYMKALEVSLILRQLIAIWHPFYSNKAIGIQPKFADAYSNMGNTL 71
GN G +EA + Y ALE+ L + I + Y N+ + + +G
Sbjct: 112 GNKLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGV--------CFLKLGKCE 163
Query: 72 RELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALYFKP 126
+++ T KA+E+NPT++ A A ++ + ++A+ K L P
Sbjct: 164 ETIKECT-------KALELNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDP 211
>At4g07675.1 68417.m01204 hypothetical protein
Length = 167
Score = 29.9 bits (64), Expect = 5.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 621 EHYARGLESLYSKMWELYQRGDKPDHI 647
E +AR LE +M + +QRG +P H+
Sbjct: 135 EQFARDLEDQQQRMQQKFQRGQQPQHL 161
>At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 958
Score = 29.5 bits (63), Expect = 7.3
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 10 NLGNVKREQGKIDEATNLYMKALEV--SLILRQLIAIWHPFYSNKAIGIQ-PKFADAYSN 66
NLG+V + K+D A + Y AL + + + L ++H KA + K + N
Sbjct: 784 NLGSVYVDCEKLDLAADCYTNALTIKHTRAHQGLARVYHLKNQRKAAYDEMTKLIEKAQN 843
Query: 67 MGNTLR---ELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKEAIESYKNALY 123
+ E D A + A +++P + + A++ D EAI+ A+
Sbjct: 844 NASAYEKRSEYCDREMAQSDLCLATQLDPLRTYPYRYRAAVLMDDHKESEAIDELSRAIS 903
Query: 124 FKPD 127
FKPD
Sbjct: 904 FKPD 907
>At5g09700.1 68418.m01124 glycosyl hydrolase family 3 protein
contains Pfam profile PF01915: Glycosyl hydrolase family
3 C terminal domain
Length = 411
Score = 29.1 bits (62), Expect = 9.7
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 269 IVEESENFIDLSCIPCNMEAATRIHRD--GIHILINMNGYTKGARNEIFALKPAPI-QVM 325
I +E+ + IDL+ E T++ + G +L+ M+G G + FA I +M
Sbjct: 137 IEKETLDRIDLNLPGKQQELVTQVAKAARGPVVLVIMSG---GGFDITFAKNDEKITSIM 193
Query: 326 WLGYPGTSG 334
W+GYPG +G
Sbjct: 194 WVGYPGEAG 202
>At4g10500.1 68417.m01722 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to hyoscyamine 6 beta-hydroxylase
[Atropa belladona][GI:4996123]; contains PF03171
2OG-Fe(II) oxygenase superfamily domain
Length = 349
Score = 29.1 bits (62), Expect = 9.7
Identities = 20/81 (24%), Positives = 33/81 (40%)
Query: 319 PAPIQVMWLGYPGTSGAGYIDYMITDEVSAPLSLSEDFSEKFAYMPHTYFVGDHKKMFPH 378
P P + G PG I ++ D+VS +D + +P+T+ V +M
Sbjct: 208 PCPEPELTYGLPGHKDPTVITVLLQDQVSGLQVFKDDKWVAVSPIPNTFIVNIGDQMQVI 267
Query: 379 LKTKYKVLIDNNSIAHENVAL 399
KYK ++ + EN L
Sbjct: 268 SNDKYKSVLHRAVVNTENERL 288
>At1g04770.1 68414.m00473 male sterility MS5 family protein similar
to male sterility MS5 [Arabidopsis thaliana] GI:3859112;
contains Pfam profile PF00515 TPR Domain
Length = 303
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 54 IGIQPKFADAYSNMGNTLRELQDMTGALACFKKAIEINPTFSDAHCNLASIYKDTGNIKE 113
+ ++ + + N+G +L D T A A ++KA I P + A CNL + G E
Sbjct: 153 VTVEKETSRILGNLGWAYMQLMDYTAAEAVYRKAQLIEPDANKA-CNLCTCLIKQGKHDE 211
Query: 114 A 114
A
Sbjct: 212 A 212
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.136 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,739,262
Number of Sequences: 28952
Number of extensions: 678794
Number of successful extensions: 1847
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1651
Number of HSP's gapped (non-prelim): 178
length of query: 652
length of database: 12,070,560
effective HSP length: 86
effective length of query: 566
effective length of database: 9,580,688
effective search space: 5422669408
effective search space used: 5422669408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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