Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000642-TA|BGIBMGA000642-PA|IPR005963|Tyrosine
5-monooxygenase, IPR002912|Amino acid-binding ACT, IPR001273|Aromatic
amino acid hydroxylase
(502 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40435.1 68415.m04988 expressed protein 36 0.083
At3g56220.1 68416.m06248 expressed protein 31 1.3
At3g32150.1 68416.m04094 hypothetical protein 31 2.4
At1g11790.1 68414.m01353 prephenate dehydratase family protein s... 29 5.4
At5g65320.1 68418.m08217 basic helix-loop-helix (bHLH) family pr... 29 7.2
At3g07630.2 68416.m00914 prephenate dehydratase family protein s... 29 7.2
At3g07630.1 68416.m00913 prephenate dehydratase family protein s... 29 7.2
At1g03470.1 68414.m00328 kinase interacting family protein simil... 29 7.2
At1g70970.1 68414.m08187 F-box family protein contains F-box dom... 29 9.5
At1g23790.1 68414.m03001 expressed protein 29 9.5
>At2g40435.1 68415.m04988 expressed protein
Length = 158
Score = 35.5 bits (78), Expect = 0.083
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 52 MFTLKNQVGGLVRALSVFQDLGINVLHIESRKSMTEVSSADILVDVECDPQRM--EQLKR 109
+F+ KNQ G LV L F+D+G+NVL E+R S T+ S + D + M E +K+
Sbjct: 84 VFSGKNQPGMLVSVLEAFEDIGLNVL--EARASCTDSFSLHAMGLENEDGENMDAEAVKQ 141
Query: 110 MLKREVQDF-EVVPPQ 124
+ ++ + E+ PQ
Sbjct: 142 AVTDAIRSWGEINDPQ 157
>At3g56220.1 68416.m06248 expressed protein
Length = 156
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 49 ISVMFTLKNQVGGLVRALSVFQDLGINVLHIESRKSMTEVSS 90
I VM + KN+ G LV L F+DLG++V +E+R S T+ S
Sbjct: 82 IKVM-SRKNEAGMLVCVLETFEDLGLDV--VEARVSCTDTFS 120
>At3g32150.1 68416.m04094 hypothetical protein
Length = 241
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 374 GLLSSVAELQHALTTPEKIKRFDPDITVHEECIITSYQNAYYYTDSFEEAKEKMRAFAE 432
G L SV LTT + + +++ ++ + S AY D F E K K A E
Sbjct: 20 GALQSVNTFYFTLTTRPRYDKLQGELSTTQDRLSESESAAYGLNDQFSELKAKYNAITE 78
>At1g11790.1 68414.m01353 prephenate dehydratase family protein
similar to gi|2392772 and is a member of the PF|00800
Prephenate dehydratase family. ESTs gb|T21562 and
gb|T21062 come from this gene
Length = 392
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 48 RISVMFTLKNQVGGLVRALSVFQDLGINVLHIESR 82
+ S++F+L+ G L +AL+VF IN+ IESR
Sbjct: 294 KTSIVFSLEEGPGVLFKALAVFALRSINLSKIESR 328
>At5g65320.1 68418.m08217 basic helix-loop-helix (bHLH) family
protein contains similarity to bHLH DNA-binding protein
Length = 296
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 24 NESPHHPKLGELHAARVQAQAESERISVMFTLKNQVGGLVRALSVFQDLGINVLHIESRK 83
+ S HH K E+ A V+ ++ K Q L + ++ F LG++ LH+
Sbjct: 197 SSSHHHHKRLEV-VADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTT 255
Query: 84 SMTEVSSADILVDVECDPQ 102
S ++S V VE D Q
Sbjct: 256 S-KDMSLFTFSVKVEADCQ 273
>At3g07630.2 68416.m00914 prephenate dehydratase family protein
similar to P-protein: chorismate mutase, prephenate
dehydratase GB:P43900 [Haemophilus influenzae]
Length = 381
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 48 RISVMFTLKNQVGGLVRALSVFQDLGINVLHIESR 82
+ S++F+L+ G L +AL+VF IN+ IESR
Sbjct: 287 KTSIVFSLEEGPGVLFKALAVFALRQINLTKIESR 321
>At3g07630.1 68416.m00913 prephenate dehydratase family protein
similar to P-protein: chorismate mutase, prephenate
dehydratase GB:P43900 [Haemophilus influenzae]
Length = 381
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 48 RISVMFTLKNQVGGLVRALSVFQDLGINVLHIESR 82
+ S++F+L+ G L +AL+VF IN+ IESR
Sbjct: 287 KTSIVFSLEEGPGVLFKALAVFALRQINLTKIESR 321
>At1g03470.1 68414.m00328 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 269
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 147 PWFPRKISDLDRAQNVLMYGSELDADHPGFKDPIYRKRREQFAAIANNYKYGH 199
PW +S+LD ++ + DAD + +Y K+R + A+ + H
Sbjct: 21 PWLHSTLSELDEKTKEMLRVIDEDADSFAARAEMYYKKRPELIAMVEEFYRSH 73
>At1g70970.1 68414.m08187 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 374 GLLSSVAELQHALTTP-EKIKRFDPDITVHEECIITSY 410
GL+ +E + AL P K R PDI HE+ ITS+
Sbjct: 134 GLICLQSETKFALCNPGTKKSRALPDIQAHEKAFITSF 171
>At1g23790.1 68414.m03001 expressed protein
Length = 518
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 362 RQPDGSFCVYGAGLLSSVAELQHAL 386
R P G C YG GLLS +AE A+
Sbjct: 182 RSPGGVRCSYGGGLLSKMAESPAAM 206
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,003,197
Number of Sequences: 28952
Number of extensions: 524290
Number of successful extensions: 1304
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1297
Number of HSP's gapped (non-prelim): 10
length of query: 502
length of database: 12,070,560
effective HSP length: 84
effective length of query: 418
effective length of database: 9,638,592
effective search space: 4028931456
effective search space used: 4028931456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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