Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000642-TA|BGIBMGA000642-PA|IPR005963|Tyrosine
5-monooxygenase, IPR002912|Amino acid-binding ACT, IPR001273|Aromatic
amino acid hydroxylase
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0128 - 26059348-26059437,26059553-26059759 37 0.033
09_04_0311 + 16585406-16585521,16585713-16586175 33 0.53
08_02_1053 - 23968372-23968442,23969245-23969294,23970396-239704... 31 1.6
06_03_1428 + 30098085-30098342,30098439-30098531 31 2.8
06_03_1424 + 30081691-30081948,30082044-30082136 31 2.8
06_03_1421 - 30057440-30057532,30057629-30057886 31 2.8
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 31 2.8
06_01_0107 - 854756-854883,855126-856968 31 2.8
05_03_0641 + 16502156-16502413,16502510-16502602 31 2.8
05_03_0640 - 16499821-16499913,16500010-16500267 31 2.8
12_01_0349 + 2677347-2677424,2677548-2677631,2677717-2677821,267... 30 3.7
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 30 4.9
08_02_0972 - 23187294-23188034 29 8.6
03_02_0610 + 9834083-9834368,9834495-9834556,9834695-9834787,983... 29 8.6
>02_05_0128 - 26059348-26059437,26059553-26059759
Length = 98
Score = 37.1 bits (82), Expect = 0.033
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 25 ESPHHPKLGELHAARVQAQAESERISVMFTLKNQVGGLVRALSVFQDLGINVLHIESRKS 84
E P H LG L A V+ + ES R + K Q+GGL+R ++ +D + LH + K
Sbjct: 3 EKPQHGSLGGL-VAGVREEYESGRTKELEWRKAQLGGLIRMITEEEDAIFDALHDDLGKH 61
Query: 85 MTEVSSADILVDVECDPQRMEQLKRMLKRE 114
E ++ V + ++ LK+ E
Sbjct: 62 RVESFRDEVGVLAKSVRNTLQNLKKWASPE 91
>09_04_0311 + 16585406-16585521,16585713-16586175
Length = 192
Score = 33.1 bits (72), Expect = 0.53
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 120 VVPPQTGDEFPPPTPMSAAASFDFGEMPWFPRK 152
+ PP E PPP P +AA S +P+F RK
Sbjct: 1 MAPPPPSSELPPPPPTNAATSSSAMAVPYFCRK 33
>08_02_1053 -
23968372-23968442,23969245-23969294,23970396-23970457,
23970527-23970709,23970737-23970901,23972235-23972408
Length = 234
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 107 LKRMLKREVQDFEVVPPQTGDEFPPPTPMSAAASFDFGEMPWF 149
+ R KREV PP T +PP P +A + +G PWF
Sbjct: 1 MSRRRKREVAP----PPHTSSSYPPGVPTLSAVPYPYGG-PWF 38
>06_03_1428 + 30098085-30098342,30098439-30098531
Length = 116
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 214 WGIVF---RELHKLYQKHACPEYLENWPQLVKYCGYREDN 250
W I+F ELH LY ++ + W LV G +E+N
Sbjct: 27 WHILFGTKSELHNLYHARTASDFEDTWTALVNEYGLQEEN 66
>06_03_1424 + 30081691-30081948,30082044-30082136
Length = 116
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 214 WGIVF---RELHKLYQKHACPEYLENWPQLVKYCGYREDN 250
W I+F ELH LY ++ + W LV G +E+N
Sbjct: 27 WHILFGTKSELHNLYHARTASDFEDTWTALVNEYGLQEEN 66
>06_03_1421 - 30057440-30057532,30057629-30057886
Length = 116
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 214 WGIVF---RELHKLYQKHACPEYLENWPQLVKYCGYREDN 250
W I+F ELH LY ++ + W LV G +E+N
Sbjct: 27 WHILFGTKSELHNLYHARTASDFEDTWTALVNEYGLQEEN 66
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 30.7 bits (66), Expect = 2.8
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 396 DPDITVHEECIITSYQNAYYYTDSFEEAKEKMRAFAESIQRPFGVRYNPYTQSVEVLSNA 455
DP + E I+ +++Y D + ++ A + ++ G ++P T S+ + S
Sbjct: 122 DPKTSTDNEGILCEEEDSYAADDGKDNGYSRICKDAHTSRKRNG-EFSP-TFSMRLRS-- 177
Query: 456 QKITALVSELRGDLCIVSSAIKKISAQDSTLDVE 489
+K+ V L GD CI SA K SA D+ +E
Sbjct: 178 RKVVEEVVLLDGDTCISDSAEKTSSAWDTPNSIE 211
>06_01_0107 - 854756-854883,855126-856968
Length = 656
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 91 ADILVDVECDPQRMEQLKRMLKREVQDFEVVPPQTGDEFPPPTPMSAAASFD 142
A +LV E R+E+L L + VQ E ++ + PPP +AAA D
Sbjct: 38 AGLLVRREAQLARLEELTESLAKSVQALESALARSVEPDPPPPAAAAAAPGD 89
>05_03_0641 + 16502156-16502413,16502510-16502602
Length = 116
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 214 WGIVF---RELHKLYQKHACPEYLENWPQLVKYCGYREDN 250
W I+F ELH LY ++ + W LV G +E+N
Sbjct: 27 WHILFGTKSELHNLYHARTASDFEDTWTALVNEYGLQEEN 66
>05_03_0640 - 16499821-16499913,16500010-16500267
Length = 116
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 214 WGIVF---RELHKLYQKHACPEYLENWPQLVKYCGYREDN 250
W I+F ELH LY ++ + W LV G +E+N
Sbjct: 27 WHILFGTKSELHNLYHARTASDFEDTWTALVNEYGLQEEN 66
>12_01_0349 +
2677347-2677424,2677548-2677631,2677717-2677821,
2678217-2678363,2678987-2679244,2679337-2679468,
2679550-2679570
Length = 274
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 187 QFAAIANNYKYGHPIPKVQYTETEIKTWGIVFRELHKLYQKH 228
Q AA+ +++ P PK+ +T+ IKT + REL K KH
Sbjct: 28 QLAALMSSFIIRKPPPKLPFTKAAIKTLESI-RELEKFIVKH 68
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 29.9 bits (64), Expect = 4.9
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 36 HAARVQAQAESERISVMFTLKNQVGGLVRALSVFQDLGINVLHIESRKSMTEVSSADILV 95
H R+Q Q+ESE + LK Q A S ++L + + E +S+ E + +I
Sbjct: 805 HKLRLQQQSESEIKELELKLKEQEHHRSVAESKIKELELKLKEQEHHRSVAESKAMEIGQ 864
Query: 96 DVECDPQRMEQLKRMLKREVQD 117
++ + QR E + ++ R++++
Sbjct: 865 EL-LETQRTEAMLQIKPRDLEN 885
>08_02_0972 - 23187294-23188034
Length = 246
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 109 RMLKREVQDFEVVPPQTGDEFPPPTPMSAAAS 140
+ LK +VQ E G PPPT SAAA+
Sbjct: 204 KFLKTQVQSLERAAAANGHRPPPPTATSAAAA 235
>03_02_0610 +
9834083-9834368,9834495-9834556,9834695-9834787,
9835689-9835805,9835972-9836055,9836198-9836293,
9836368-9836445,9836548-9836637,9836733-9836800,
9836940-9837021,9838203-9838289
Length = 380
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 48 RISVMFTLKNQVGGLVRALSVFQDLGINVLHIESR 82
+ S++F+L+ G L +AL VF IN+ IESR
Sbjct: 272 KTSIVFSLEEGPGQLFKALGVFALREINLTKIESR 306
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,824,423
Number of Sequences: 37544
Number of extensions: 651420
Number of successful extensions: 1793
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1781
Number of HSP's gapped (non-prelim): 16
length of query: 502
length of database: 14,793,348
effective HSP length: 85
effective length of query: 417
effective length of database: 11,602,108
effective search space: 4838079036
effective search space used: 4838079036
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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