Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000642-TA|BGIBMGA000642-PA|IPR005963|Tyrosine
5-monooxygenase, IPR002912|Amino acid-binding ACT, IPR001273|Aromatic
amino acid hydroxylase
(502 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17793| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 3e-53
SB_3716| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_25339| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_3105| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_34912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_50834| Best HMM Match : GCR (HMM E-Value=2.5) 29 8.7
SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
>SB_17793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 206 bits (503), Expect = 3e-53
Identities = 105/174 (60%), Positives = 123/174 (70%), Gaps = 8/174 (4%)
Query: 265 TGFQLRPVAGYLSPRDFLSGLAFRVFHCTQYIRHSSDPFYTPEPDCC-------HELLGH 317
TGF LRPVAG LS RDFL+GLAFRVFH TQYIRH + P YTPEP C HEL+GH
Sbjct: 225 TGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPTKPMYTPEPTICIVSSDVVHELIGH 284
Query: 318 MPLLANPSFAQFSQELGLASLGASDADIDKLATLYFFTVEFGLCRQPDGSFCVYGAGLLS 377
+PL A+P FAQFSQE+GLASLGA D ++KLATLY+FTVEFGLCRQ +G YGAGLLS
Sbjct: 285 VPLFADPDFAQFSQEIGLASLGAPDEWVEKLATLYWFTVEFGLCRQ-EGEVKAYGAGLLS 343
Query: 378 SVAELQHALTTPEKIKRFDPDITVHEECIITSYQNAYYYTDSFEEAKEKMRAFA 431
S ELQ+ LT K +P+ T ++ IT YQ Y+ DSF A+ K+R A
Sbjct: 344 SFGELQYCLTDEPKKYPLEPEKTSVQKYPITQYQPVYFIADSFLSARNKVRETA 397
Score = 49.2 bits (112), Expect = 8e-06
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 37 AARVQAQAESERISVMFTLKNQVGGLVRALSVFQDLGINVLHIESRKSMTEVSSADILVD 96
A + + ++E + +V+F+L +VG L RAL +F+D +N+ HIESR S + D D
Sbjct: 19 AKKHEGESEKKATTVVFSLNEEVGALARALKLFEDHHVNMTHIESRPSKACKTRYDFFAD 78
Query: 97 VE 98
E
Sbjct: 79 CE 80
>SB_3716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 52.4 bits (120), Expect = 8e-07
Identities = 24/36 (66%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 140 SFDFGEMPWFPRKISDLDR-AQNVLMYGSELDADHP 174
S D +PWFPRKISDLD+ A VL YG+ELD+DHP
Sbjct: 48 SDDKVSVPWFPRKISDLDKFADRVLSYGAELDSDHP 83
>SB_25339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1049
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 318 MPLLANPSFAQFSQELGLASLGASDADIDKLATLYFFTVEFGL-CRQPDGSFCVYGAGLL 376
+P+ A P+ A F+ +SLG ++ + + F V + C DG C G +L
Sbjct: 739 LPITAVPTTAGFTSS-ERSSLGV--LSLNPQSGIPFTDVSIPMVCTPLDGFPCSTGTNVL 795
Query: 377 SSVAELQHALTTPEKIKRFDPDITVHEE 404
S+ L TP KI +FD +T++E+
Sbjct: 796 DSIISL-----TPGKIGQFDSSVTMNED 818
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 376 LSSVAELQHALTT-----PEKIKRFDPDITVHEECIITSYQNAYYYTDSFEEAKEKMRAF 430
L S++E+ H+ T ++I+ D I E I T ++ ++E KEK++
Sbjct: 2358 LESISEVFHSGTENVDALKKEIRDRDKSIGELTEKIETLEKDNSSVQSEYKETKEKLKKR 2417
Query: 431 AESIQRPFGVRYNPYTQSVEVLSNAQKITALVSELRGDLCIVSSAIKKISAQDSTLDVE 489
+ S+Q GV N + Q ++L +++ ++++ +S +++ + D L V+
Sbjct: 2418 SSSLQEKLGVSKN-FMQ--KILDENEELKGRIADIEKSNASLSESLESLRKTDEALKVK 2473
>SB_3105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 5.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 203 KVQYTETEIKTWGIVFRELHKLYQKHAC 230
K +Y + +T G+ ++LH LY+ HAC
Sbjct: 363 KSKYKSADWETCGVDTKKLHPLYETHAC 390
>SB_34912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 554
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/41 (29%), Positives = 27/41 (65%)
Query: 448 SVEVLSNAQKITALVSELRGDLCIVSSAIKKISAQDSTLDV 488
S+E+ +N Q+ A VS++R D+C+ ++ +K+ ++ +V
Sbjct: 372 SMEIEANGQEKEAEVSQIRTDVCLATTTQEKVDLVTTSSNV 412
>SB_50834| Best HMM Match : GCR (HMM E-Value=2.5)
Length = 909
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 33 GELHAARVQAQAESERISVMF--TLKNQVGGLVRALSVFQDLGINVLHIESR 82
GE+H + ER++ + T ++ G L++A +VF+ LG+ +HIE R
Sbjct: 817 GEVH----DVNSPKERLAALLYDTFEDSNGFLLKAQTVFRSLGLADVHIEPR 864
>SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 66 LSVFQDLGINVLHIESRKSMTEVSSAD---ILVDVECDPQRMEQLKRMLK 112
LSV + LG++ +++ + T +S A+ IL D CD +EQL +K
Sbjct: 157 LSVLEQLGLDNINVLKEQLTTNLSLANCFGILSDEVCDVSNIEQLVTFVK 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,828,358
Number of Sequences: 59808
Number of extensions: 704121
Number of successful extensions: 1632
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1624
Number of HSP's gapped (non-prelim): 9
length of query: 502
length of database: 16,821,457
effective HSP length: 85
effective length of query: 417
effective length of database: 11,737,777
effective search space: 4894653009
effective search space used: 4894653009
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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