Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000641-TA|BGIBMGA000641-PA|IPR006201|Neurotransmitter-
gated ion-channel, IPR006028|Gamma-aminobutyric acid A receptor,
IPR002289|Gamma-aminobutyric-acid A receptor, beta subunit,
IPR013838|Beta tubulin, autoregulation binding site,
IPR006202|Neurotransmitter-gated ion-channel ligand-binding,
IPR006029|Neurotransmitter-gated ion-channel transmembrane region
(269 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 291 3e-81
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 291 3e-81
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 268 3e-74
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 136 2e-34
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 126 2e-31
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 126 2e-31
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 112 3e-27
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 105 3e-25
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 104 1e-24
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 98 6e-23
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 95 6e-22
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 95 6e-22
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 84 1e-18
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 84 1e-18
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 83 3e-18
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 83 3e-18
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 291 bits (715), Expect = 3e-81
Identities = 143/167 (85%), Positives = 146/167 (87%), Gaps = 3/167 (1%)
Query: 1 MRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
MRDIRYKWNEGPNSVGVS+EVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY
Sbjct: 163 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 222
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
YLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG NAALPKISYVKS
Sbjct: 223 YLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKS 282
Query: 121 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKK 167
IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRK RF QK+A K
Sbjct: 283 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---QKIAESMK 326
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 291 bits (715), Expect = 3e-81
Identities = 143/167 (85%), Positives = 146/167 (87%), Gaps = 3/167 (1%)
Query: 1 MRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
MRDIRYKWNEGPNSVGVS+EVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY
Sbjct: 102 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 161
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
YLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG NAALPKISYVKS
Sbjct: 162 YLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKS 221
Query: 121 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKK 167
IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRK RF QK+A K
Sbjct: 222 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---QKIAESMK 265
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 268 bits (658), Expect = 3e-74
Identities = 132/167 (79%), Positives = 138/167 (82%), Gaps = 3/167 (1%)
Query: 1 MRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
MRDIRYKWN G SVG+S+EV LPQF+VLGHRQR I L+TGNYSRLACEIQFVRSMGY
Sbjct: 163 MRDIRYKWNAGLQSVGISNEVELPQFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRSMGY 222
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
YLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG NAALPKISYVKS
Sbjct: 223 YLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKS 282
Query: 121 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKK 167
IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRK RF QK+A K
Sbjct: 283 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---QKIAESMK 326
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 136 bits (329), Expect = 2e-34
Identities = 66/142 (46%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYL 62
D+ W E P GV E LPQF ++G+ + L TG Y RL+ + R++GY++
Sbjct: 188 DVVMYWKETPVR-GVE-EAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFV 245
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
Q Y+PS LIV++SWVSFW+N AT ARV+LG ++LP+ISYVK+ID
Sbjct: 246 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 305
Query: 123 VYLGTCFVMVFASLLEYATVGY 144
+YL CFV VFA+LLEYA V Y
Sbjct: 306 IYLVMCFVFVFAALLEYAAVNY 327
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 126 bits (304), Expect = 2e-31
Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYL 62
D+ + W EG + V V + LP+F + TG YS L ++ F R YYL
Sbjct: 187 DLVFLWKEG-DPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYL 245
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
IQIYIP ++VI+SWVSFWL+++A PARVSLG NA+LP +SY K+ID
Sbjct: 246 IQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAID 305
Query: 123 VYLGTCFVMVFASLLEYATVGYMAK 147
++ G C VF +LLE+A V Y ++
Sbjct: 306 IWTGVCLTFVFGALLEFALVNYASR 330
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 126 bits (304), Expect = 2e-31
Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYL 62
D+ + W EG + V V + LP+F + TG YS L ++ F R YYL
Sbjct: 187 DLVFLWKEG-DPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYL 245
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
IQIYIP ++VI+SWVSFWL+++A PARVSLG NA+LP +SY K+ID
Sbjct: 246 IQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAID 305
Query: 123 VYLGTCFVMVFASLLEYATVGYMAK 147
++ G C VF +LLE+A V Y ++
Sbjct: 306 IWTGVCLTFVFGALLEFALVNYASR 330
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 112 bits (270), Expect = 3e-27
Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 2 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYY 61
+D+ + WN V V+ E+ LPQ + + I +TGN++ + R +GY+
Sbjct: 158 QDLVFIWNMTDPLV-VNPEIELPQLDISNNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYH 216
Query: 62 LIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSI 121
L YIPS LIV++SW++FW+ A PARV+LG +LP +SYVK+I
Sbjct: 217 LFHTYIPSALIVVMSWIAFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 276
Query: 122 DVYLGTCFVMVFASLLEYATV-GYM 145
DV++ +C V VF SL+E+A V YM
Sbjct: 277 DVWMSSCSVFVFLSLMEFAVVNNYM 301
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 105 bits (253), Expect = 3e-25
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 2 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGN--YSRLACEIQFVRSMG 59
RD+ YKWN V ++ ++ L QF ++ + S T + YS L R MG
Sbjct: 156 RDVIYKWNSA-RQVAIAEDMKLSQFDLVANPTANYSASTTLSHAEYSMLLVYFHLQRHMG 214
Query: 60 YYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVK 119
+LIQ+Y P L+V++SWVSFWLNR AT RVSLG LPK+ Y
Sbjct: 215 NFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPT 274
Query: 120 SIDVYLGTCFVMVFASLLEYATVGYMAK 147
++D ++ F +FA+++++A V Y K
Sbjct: 275 ALDFFVFLSFAFIFATIIQFAVVHYFTK 302
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 104 bits (249), Expect = 1e-24
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 6 YKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQI 65
++W+ V V + LPQ +++ + +TGN++ L R +GYYL
Sbjct: 193 FQWDPDVPLV-VDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHT 251
Query: 66 YIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSIDVYL 125
YIP+ LIVI+SWVSFW+ A PARV+LG A+LP +SY+K++D ++
Sbjct: 252 YIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 311
Query: 126 GTCFVMVFASLLEYATV 142
C V VF +L+EY V
Sbjct: 312 SVCTVFVFMALMEYCLV 328
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 98.3 bits (234), Expect = 6e-23
Identities = 49/155 (31%), Positives = 89/155 (57%), Gaps = 11/155 (7%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT---------GNYSRLACEIQ 53
D+ W++ P + ++ E+ L ++K++ + EI TT GN+S ++ +
Sbjct: 169 DMVLYWDQEP--IILADELHLTEYKLVEKWVNSSEIFYTTSQQYYGHFAGNFSSISITFK 226
Query: 54 FVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALP 113
R MG++++ YIPS LIV+ISWVSFWL+ +A+P R+ LG +LP
Sbjct: 227 LAREMGFFMMDYYIPSILIVVISWVSFWLHMDASPPRIVLGTNTILTFMTLASKVENSLP 286
Query: 114 KISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKR 148
K+SY+K+ +++ C + +FA+++E+A V + +R
Sbjct: 287 KVSYIKASEIWFLGCTIFLFAAMVEFAFVNTIYRR 321
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 95.1 bits (226), Expect = 6e-22
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 4 IRYKWNEGPNSVGVSSEVSLPQFKVLGH--RQRAMEISLT-TGNYSRLACEIQFVRSMGY 60
+R +W G +V V+ E+ L Q+ + + ++ L +GN+SRL +F R +G+
Sbjct: 144 LRLRWGTG--AVTVNPELKLLQYDIGKPVVAEETVDYMLEKSGNFSRLVVFFRFERQIGH 201
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
+LIQ + PS L+V++SW SFWL +A P RV+L + +P ++YVK+
Sbjct: 202 HLIQTFAPSTLVVMLSWFSFWLGLDAIPGRVALLVTSMLTLVTMFTGLKSDIPPVAYVKA 261
Query: 121 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAV 159
+DV++ C + VFA+L E+ V + R Q+ T++
Sbjct: 262 LDVWMAGCMMFVFAALGEFVVVKVLDLRSQLEYDLQTSI 300
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 95.1 bits (226), Expect = 6e-22
Identities = 47/127 (37%), Positives = 66/127 (51%)
Query: 21 VSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSF 80
++L QF ++G R + G +S L R GY+LIQ+Y+P LIV++SWVSF
Sbjct: 207 MALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSF 266
Query: 81 WLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYA 140
W++R AT RV LG LPK+ Y ++D +L F A+LLE+A
Sbjct: 267 WIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLLEFA 326
Query: 141 TVGYMAK 147
V Y K
Sbjct: 327 GVHYFTK 333
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 83.8 bits (198), Expect = 1e-18
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 4 IRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLT-TGNYSRLACEIQFVRSMGYYL 62
I Y W ++ S ++ ++ ++ I ++ GNYS L ++ F R +Y
Sbjct: 265 ITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKVDLIFTRDRAFYF 324
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
++IP ++V S+++FWL NA PARV +G + LP +S + +++
Sbjct: 325 TTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMN 384
Query: 123 VYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKK 167
V+ G C ++ASLLE+ V Y+ ++ M + + +K+
Sbjct: 385 VWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVYRPGENPVTQKR 429
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 83.8 bits (198), Expect = 1e-18
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 4 IRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLT-TGNYSRLACEIQFVRSMGYYL 62
I Y W ++ S ++ ++ ++ I ++ GNYS L ++ F R +Y
Sbjct: 214 ITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKVDLIFTRDRAFYF 273
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
++IP ++V S+++FWL NA PARV +G + LP +S + +++
Sbjct: 274 TTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMN 333
Query: 123 VYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKK 167
V+ G C ++ASLLE+ V Y+ ++ M + + +K+
Sbjct: 334 VWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVYRPGENPVTQKR 378
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 83.0 bits (196), Expect = 3e-18
Identities = 37/125 (29%), Positives = 65/125 (52%)
Query: 43 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXX 102
GNYS L ++ F R +Y ++IP ++V S+++FWL NA PARV +G
Sbjct: 285 GNYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFF 344
Query: 103 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKM 162
+ LP +S + +++V+ G C ++ASLLE+ V Y+ ++ M + +
Sbjct: 345 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVYRPGENP 404
Query: 163 AVEKK 167
+K+
Sbjct: 405 VTQKR 409
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 83.0 bits (196), Expect = 3e-18
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Query: 4 IRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLT-TGNYSRLACEIQFVRSMGYYL 62
I Y W ++ S ++ ++ ++ I ++ GNYS L ++ F R +Y
Sbjct: 214 ITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKVDLIFTRDRAFYF 273
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
++IP ++V S+++FWL NA PARV +G + LP +S + +++
Sbjct: 274 TTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMN 333
Query: 123 VYLGTCFVMVFASLLEYATVGYMAKRIQM 151
V+ G C ++ASLLE+ V Y+ ++ M
Sbjct: 334 VWDGVCMCFIYASLLEFVCVNYVGRKRPM 362
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,817
Number of Sequences: 429
Number of extensions: 2416
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 16
length of query: 269
length of database: 140,377
effective HSP length: 57
effective length of query: 212
effective length of database: 115,924
effective search space: 24575888
effective search space used: 24575888
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 43 (21.4 bits)
- SilkBase 1999-2023 -