Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000641-TA|BGIBMGA000641-PA|IPR006201|Neurotransmitter-
gated ion-channel, IPR006028|Gamma-aminobutyric acid A receptor,
IPR002289|Gamma-aminobutyric-acid A receptor, beta subunit,
IPR013838|Beta tubulin, autoregulation binding site,
IPR006202|Neurotransmitter-gated ion-channel ligand-binding,
IPR006029|Neurotransmitter-gated ion-channel transmembrane region
(269 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52790| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 4e-29
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 124 6e-29
SB_16665| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.10001e-40) 118 5e-27
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 110 1e-24
SB_53778| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 108 4e-24
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10) 98 8e-21
SB_6751| Best HMM Match : Neur_chan_memb (HMM E-Value=1.7e-07) 98 8e-21
SB_58314| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-36) 97 1e-20
SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 96 3e-20
SB_32998| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11) 95 7e-20
SB_53537| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 94 9e-20
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 93 2e-19
SB_3157| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00016) 93 3e-19
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 92 5e-19
SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_31365| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-06) 83 3e-16
SB_50589| Best HMM Match : Neur_chan_memb (HMM E-Value=9.2e-05) 80 2e-15
SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10) 78 7e-15
SB_13579| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00056) 77 2e-14
SB_45611| Best HMM Match : p450 (HMM E-Value=0) 74 1e-13
SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12) 73 2e-13
SB_10099| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.6e-17) 72 4e-13
SB_8533| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 6e-13
SB_30690| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-09) 68 9e-12
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_31582| Best HMM Match : Neur_chan_memb (HMM E-Value=0.58) 62 5e-10
SB_10344| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_10532| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_49966| Best HMM Match : Neur_chan_memb (HMM E-Value=0.064) 51 9e-07
SB_19928| Best HMM Match : Neur_chan_memb (HMM E-Value=4e-08) 50 2e-06
SB_55738| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038) 43 2e-04
SB_47353| Best HMM Match : Neur_chan_memb (HMM E-Value=3.2) 43 2e-04
SB_10741| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.71) 42 7e-04
SB_41127| Best HMM Match : Neur_chan_memb (HMM E-Value=5.9) 41 0.001
SB_10744| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-22) 36 0.026
SB_41472| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_52529| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 33 0.19
SB_14026| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 32 0.57
SB_4969| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-08) 30 1.7
SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29) 29 3.0
SB_9235| Best HMM Match : TolA (HMM E-Value=0.33) 29 5.3
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 28 7.0
>SB_52790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 125 bits (301), Expect = 4e-29
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 3/167 (1%)
Query: 4 IRYKWN--EGPNSVGVSSEVSL-PQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
I YKW EG V +V L PQF + + GN+S + F R+ +
Sbjct: 200 IMYKWEKGEGDGMSFVPRDVKLLPQFNLTKLELSSRNTQYVIGNWSGVMATFTFERTYSF 259
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
Y+I IY PS LIV+ISW+SF L R+ +PARV+LG N A+PK++YVK+
Sbjct: 260 YVIHIYGPSALIVLISWISFLLPRDQSPARVTLGVTSVLTEVTILTMSNNAMPKVNYVKA 319
Query: 121 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKK 167
+D YL CF+ VFASL+EY+ + +A R R+++ A +++A+EK+
Sbjct: 320 VDKYLIACFLFVFASLMEYSLILVLANRTMRREKQKRAAKRLAMEKE 366
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 124 bits (300), Expect = 6e-29
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 6/172 (3%)
Query: 3 DIRYKWNEGPNSVG----VSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSM 58
D+ Y+WN NS G +S ++ +PQFK+ + G +S L + F R +
Sbjct: 106 DVYYRWNSR-NSTGDVVYISEDLEMPQFKITNVKLEERTNIYNIGPHSALIAKFTFHRRL 164
Query: 59 GYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYV 118
GYY+IQ YIPS L V ISW SFW++ ++ PARV LG A LPK+SY
Sbjct: 165 GYYMIQTYIPSMLTVTISWFSFWISPDSPPARVGLGITTVLTMITISNSARAPLPKVSYT 224
Query: 119 KSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMR-KQRFTAVQKMAVEKKIQ 169
K+ID +L C V VF +L+EYA V + A ++Q R + + +++M E +++
Sbjct: 225 KAIDWFLLMCLVYVFGALMEYAIVNFYACKVQQRNRNKREEIRRMKREAEME 276
>SB_16665| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.10001e-40)
Length = 935
Score = 118 bits (284), Expect = 5e-27
Identities = 53/110 (48%), Positives = 72/110 (65%)
Query: 39 SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXX 98
SL G+YSRL +F RS+G++LIQ YIP+ LIV++SW++FW+N +TPAR+ LG
Sbjct: 387 SLVPGSYSRLTVLFRFERSIGFFLIQTYIPAYLIVMLSWIAFWINHTSTPARIGLGITTV 446
Query: 99 XXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKR 148
A+LPK+SYVKSI+ +L CF+ VF SL+EY V Y R
Sbjct: 447 LTMTTLTNSARASLPKVSYVKSIEWFLIMCFLYVFMSLVEYGCVSYEVNR 496
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 116 bits (278), Expect = 3e-26
Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 1 MRDIRYKWNEGPNS--VGVSSEVSLPQFKVLGHRQRAMEIS-LTTGNYSRLACEIQFVRS 57
+ D+ YKW G + + V +++L +F L Q +IS TG++S + E R
Sbjct: 730 INDVVYKWRLGRSDEDIKVKQDLALTKF-TLWKIQTFTKISHYVTGSFSGIVAEFTMTRR 788
Query: 58 MGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISY 117
YY+IQI++P +IV +SW+SFW++ ++TPAR++LG ++LPK+ Y
Sbjct: 789 ALYYVIQIFLPCAMIVFLSWISFWIDSHSTPARIALGITTVLSMTTLLFGVQSSLPKVPY 848
Query: 118 VKSIDVYLGTCFVMVFASLLEYATVGY 144
VKS+DVY+ F +VFASL+EYA V Y
Sbjct: 849 VKSLDVYMFVSFTLVFASLIEYACVHY 875
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 110 bits (264), Expect = 1e-24
Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 1 MRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
+R + Y+W P + E+S QF + G YS L F R +G+
Sbjct: 108 VRHLLYRWKNSPGIKVLDGEMS--QFYMTRITTSLRNEIYVAGEYSVLKASFTFQRRVGF 165
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
YLIQIYIP IV ++W+S W++R ATPARVSL NA++P++SYVKS
Sbjct: 166 YLIQIYIPCMAIVFVAWMSLWVDRRATPARVSLCITTLLTIATIWGNVNASMPRVSYVKS 225
Query: 121 IDVYLGTCFVMVFASLLEYATV 142
ID+YL T F V +LLEY +
Sbjct: 226 IDIYLMTSFTFVLGTLLEYIVI 247
>SB_53778| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 383
Score = 108 bits (260), Expect = 4e-24
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 3 DIRYKW-NEGPNSVGVSSEV-SLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
+++Y+W N N + V+ ++ +PQ+ + GN+S L +F R GY
Sbjct: 176 NVQYQWENRSDNGIAVNKKIRDMPQYNLSDINVSRHFTMYVAGNWSGLTATFRFRRRSGY 235
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
++I IY P LIVI+SW+SF + +T AR++LG N ++PK+SYVK+
Sbjct: 236 FIIHIYAPCALIVILSWISFCIPPESTAARIALGITSVLTITTILNMLNNSMPKVSYVKA 295
Query: 121 IDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQK 161
+D YL CF+ VFA LLEY V Y+ +++R V +
Sbjct: 296 VDWYLIGCFLFVFAVLLEYTFVLYIDNVHNKKRKRHKHVPR 336
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 103 bits (248), Expect = 1e-22
Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 7 KWNEGPN-SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQI 65
KW G SV + ++LPQ VLG + R + +GN+SRL+ +F R + +L +
Sbjct: 201 KWKFGETGSVTWAENINLPQMDVLGVKGREVVDVFASGNFSRLSLAFKFKRRISLFLTET 260
Query: 66 YIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSIDVYL 125
Y+P LIV +SWVSFW+N PARV+L +LPK++Y K D L
Sbjct: 261 YVPLVLIVALSWVSFWINYKVAPARVALCITTVLTIITLSASVRTSLPKVTYTKYSDWIL 320
Query: 126 GTCFVMVFASLLEYATVGY 144
T V VF +L+EYA V Y
Sbjct: 321 ITGLVYVFGALVEYAVVNY 339
>SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 101 bits (243), Expect = 5e-22
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 4 IRYKWN-EGPNSVGVSSEV--SLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
I +KW E + +G E LPQ+K+ + GN+S + F R Y
Sbjct: 160 IVFKWEIEDGDGLGFVPESLKMLPQYKLARVHLSTLHNEYVVGNWSGIKALFTFERMYSY 219
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKS 120
++I +Y P LIV++SWVSF L + PAR++LG N ++PK++YVK+
Sbjct: 220 FVIHVYGPCALIVVVSWVSFLLPKEQAPARITLGVTSVLTVVTILNMLNNSMPKVNYVKT 279
Query: 121 IDVYLGTCFVMVFASLLEYATVGYMAK 147
ID YL CF+ VFA+L+EY+ V ++ K
Sbjct: 280 IDKYLIGCFLFVFATLVEYSLVLWLTK 306
>SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10)
Length = 624
Score = 97.9 bits (233), Expect = 8e-21
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 3 DIRYKWNEGPNSVGVSSEV---SLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMG 59
D+++ W + VG V + QF ++ ++ + +S L I F R
Sbjct: 324 DLQFSWRK--KEVGSEIWVYDRQMAQFDIVSAKRFLKHKIFHSDQFSGLTATIVFQRRSA 381
Query: 60 YYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVK 119
YY+ Q+YIP IV ISWVSFW+N A PARV+L NA +P++SY+K
Sbjct: 382 YYVFQMYIPCVCIVAISWVSFWINHEAVPARVALSITTVLTISYMRGSVNAGMPRVSYLK 441
Query: 120 SIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQ 154
SID +L FV +F +L+EY V ++R + + +
Sbjct: 442 SIDYFLLGSFVFIFMTLIEYVLVLKYSRREKFKAE 476
>SB_6751| Best HMM Match : Neur_chan_memb (HMM E-Value=1.7e-07)
Length = 213
Score = 97.9 bits (233), Expect = 8e-21
Identities = 48/146 (32%), Positives = 80/146 (54%)
Query: 2 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYY 61
+DI+Y+W +S +L QF + + GN+S + E F R +GY+
Sbjct: 6 QDIKYRWRPPMSSSVDVRNRNLAQFALTSIIEVEYVEHYDLGNFSIIQVEFTFQRRLGYF 65
Query: 62 LIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSI 121
LIQ+YIPS +V++SW+ FW++++ R++LG NA++P++SY K++
Sbjct: 66 LIQVYIPSIFVVVLSWIVFWMDKDNMGDRMALGITTVLTIMFLLGAVNASMPRVSYPKAL 125
Query: 122 DVYLGTCFVMVFASLLEYATVGYMAK 147
D YL F +VF L+E TV ++K
Sbjct: 126 DWYLMVSFTLVFLVLIECMTVFVISK 151
>SB_58314| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-36)
Length = 444
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 6 YKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQI 65
Y W G + + QF+ +G + + G+++ L E F R + Y++
Sbjct: 193 YTWKGGDDQGVEIVSKEMAQFEFIGANTYTKAQTNSKGSFASLRAEFTFKRRVAYFITAT 252
Query: 66 YIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSIDVYL 125
Y+P+ ++VI+SW +FW++RNA PARV+L N ++PK+SY K+ID +L
Sbjct: 253 YMPAMILVILSWCTFWIHRNAGPARVTLSITTILTTILLTSSTNGSMPKVSYSKAIDYFL 312
Query: 126 GTCFVMVFASLLEYATV 142
T +F SLLEY V
Sbjct: 313 MTSLGFIFMSLLEYILV 329
>SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 456
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYL 62
DI Y+W + V + + + QF + + TG++S L ++ R +G+YL
Sbjct: 203 DIVYQWAD--ERVTWAHDQEIAQFVLEKIETENLTRRYITGDFSALGIRLRLNRRLGHYL 260
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLG-XXXXXXXXXXXXXXNAALPKISYVKSI 121
++Y+P+ LIV++SW+SF+L+R++ PARVSLG +LP +SYVK++
Sbjct: 261 TRVYVPAVLIVMLSWLSFYLDRHSAPARVSLGITTVLTMTTLLIGIGQGSLPVVSYVKAL 320
Query: 122 DVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 155
D YL + MVF + EYA + + K ++ +R
Sbjct: 321 DWYLFVSYCMVFGAFAEYAVINHRDKSYFLKLRR 354
>SB_32998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 95.5 bits (227), Expect = 4e-20
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 43 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXX 102
G++ L +F R Y+++Q Y+PS IV +SW+ FW+N+NA PAR+SL
Sbjct: 375 GSFDSLRVSFRFKRRTSYFIVQHYVPSAFIVFLSWLGFWINKNAVPARISLTVTCILSTM 434
Query: 103 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMA--KRIQM-RKQRFTAV 159
N++LP+ISY+K++D YL F+ + AS++EY V + KRI + RK
Sbjct: 435 VLFESINSSLPRISYLKAVDYYLIISFMFILASMVEYVLVLNVTDYKRITLSRKHSLQTT 494
Query: 160 QKMAV 164
Q + +
Sbjct: 495 QSITL 499
>SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11)
Length = 350
Score = 94.7 bits (225), Expect = 7e-20
Identities = 48/146 (32%), Positives = 76/146 (52%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYL 62
D+ Y+W + S + + QF V+ +++ + +S + +F R YY+
Sbjct: 108 DLMYEWKKPVGSDVFIYDAEMAQFTVVNVKRKLKHPLYHSRRFSGMTVTFKFQRRTMYYI 167
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
Q+YIP IV +SWVSFW++ +A PARV L N+ LP++SY+K+ID
Sbjct: 168 FQMYIPCVCIVALSWVSFWVDADAVPARVGLSITTVLTICYMLGSVNSNLPRVSYLKAID 227
Query: 123 VYLGTCFVMVFASLLEYATVGYMAKR 148
+L F +F +L+EY V AKR
Sbjct: 228 YFLLLSFGFIFLTLVEYVFVLKYAKR 253
>SB_53537| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 379
Score = 94.3 bits (224), Expect = 9e-20
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 3 DIRYKWN-EGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYY 61
DI+YKW G + + S + QF ++ R + + +G++S+L R + Y+
Sbjct: 195 DIKYKWTPRGTKGIEIISNETA-QFVLVEARTEQIATAKISGHFSQLVATFSLKRRLEYF 253
Query: 62 LIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSI 121
I + P+ ++V++SW FW+ +A PAR+SL NA +PK+SY+K+I
Sbjct: 254 AITVVTPAMILVVLSWCCFWIVPDAIPARISLSVTTILSTLLLSGTVNAQMPKVSYMKAI 313
Query: 122 DVYLGTCFVMVFASLLEYATV 142
DV++ F +F SL+EY V
Sbjct: 314 DVFVLGNFAFIFLSLIEYVAV 334
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 93.5 bits (222), Expect = 2e-19
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYL 62
DI ++WN PN + + L QF + G+ GNY+ + + R +GYY+
Sbjct: 369 DIFFRWNN-PNKLSRVQKSDLAQFHLAGYDLITETGIYEEGNYTTVKVIFKMNRRVGYYI 427
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
IQ Y P LIV++SW+ FW++ R++LG NA++PK+SY K++D
Sbjct: 428 IQAYCPDVLIVVLSWIIFWMDVKDMGDRMALGITTILTIMFLLGAVNASMPKVSYPKALD 487
Query: 123 VYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTA 158
YL F VF +L+E V + + + K + T+
Sbjct: 488 WYLMVSFAFVFLTLIESMIVFLLTPQGESEKPKKTS 523
>SB_3157| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00016)
Length = 118
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/99 (38%), Positives = 60/99 (60%)
Query: 44 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXX 103
++ L +F R Y+++Q Y+PS IV +SW+ FW+N+NA PAR+SL
Sbjct: 2 SFDSLRVSFRFKRRTSYFIVQHYVPSAFIVFLSWLGFWINKNAVPARISLTVTCILSTMV 61
Query: 104 XXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 142
N++LP+ISY+K++D YL F+ + AS++EY V
Sbjct: 62 LFESINSSLPRISYLKAVDYYLIISFMFILASMVEYVLV 100
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 92.3 bits (219), Expect = 4e-19
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 2 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAM--EISLTTGNYSRLACEIQFVRSMG 59
++I Y+W + P V V ++ +L QF + + + + EI GNYS L + F R +G
Sbjct: 107 KNIVYRW-QSPLGVTVRNK-NLAQF-IFTYLELSEYEEIYGMMGNYSILQVDFAFKRRLG 163
Query: 60 YYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVK 119
Y+LIQ+Y P +V++SW+ FW++++ R++LG NAA+P++SY K
Sbjct: 164 YFLIQVYAPDIFVVLLSWIVFWMDKDDMGNRMALGITTILTIMFLLGSVNAAMPRVSYPK 223
Query: 120 SIDVYLGTCFVMVFASLLEYATVGYMAK-RIQMRKQRFTAV 159
++D YL F +VF L+E V ++K + RK+R + +
Sbjct: 224 ALDWYLMVSFSLVFLVLIECMIVFVISKYKNDRRKRRISKI 264
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 91.9 bits (218), Expect = 5e-19
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 2 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYY 61
R I +KW E N V + ++ L +F V + + G Y L F R MG+Y
Sbjct: 219 RQIDFKWKE-INPVVIFNK-DLAEFDVTSYEISERNATYVAGVYKNLVVTFTFKRRMGFY 276
Query: 62 LIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSI 121
IQ YIP ++V +SW+SFW++R RVSLG N+ +P++SY K+I
Sbjct: 277 FIQFYIPCIVMVTLSWISFWMDRYYIGERVSLGITTVLTIVFLLGSSNSTMPRVSYAKAI 336
Query: 122 DVYLGTCFVMVFASLL 137
D YL F+ VF++L+
Sbjct: 337 DWYLIGSFMFVFSTLV 352
>SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 926
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 42 TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXX 101
+G YS L F R + YL+ Y+P+ L V++SWVSF+++ N+ PAR +LG
Sbjct: 73 SGTYSSLVATFPFRRRIQNYLLSFYVPTILTVMLSWVSFFISPNSAPARCALGIITVLAV 132
Query: 102 XXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 144
+ P +SYV S D+Y+ C+V VF +LLEYA V +
Sbjct: 133 GGFLTNQRKSFPTVSYVMSADLYILVCYVFVFCALLEYAVVHF 175
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 84.6 bits (200), Expect = 8e-17
Identities = 40/105 (38%), Positives = 61/105 (58%)
Query: 40 LTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXX 99
L G +S + I+F R + +L+ Y+P+ L V++SWVSF+++ N+ PAR +LG
Sbjct: 292 LARGVFSAVRASIEFRRRIQNFLLCFYVPTILTVMLSWVSFFISPNSAPARCALGIITVL 351
Query: 100 XXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 144
+ P +SYV S D+Y+ C+V VF +LLEYA V Y
Sbjct: 352 AVGGFLTGQQRSSPVVSYVTSADLYILVCYVFVFCALLEYAVVHY 396
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 115 ISYVKSIDVYLGTCFVMVFASLLEYATVGY 144
ISYV S D+Y+ C+V VF +LLEYA V Y
Sbjct: 586 ISYVTSADLYVMVCYVFVFCALLEYAVVHY 615
>SB_31365| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-06)
Length = 213
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/115 (34%), Positives = 63/115 (54%)
Query: 43 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXX 102
GN+S + RS Y+L +Y S +IV ISW+ F + + T AR+++G
Sbjct: 50 GNFSAVVAVFSIERSYTYFLTHVYGTSCVIVFISWMGFVIPPDQTAARIAVGVTTLLTQV 109
Query: 103 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFT 157
N+++PK+SYVKSID +L +C + VF SL+EY + + + R Q+ T
Sbjct: 110 TVINILNSSMPKVSYVKSIDKFLISCLIFVFLSLIEYCVILILDGKRTRRHQQHT 164
>SB_50589| Best HMM Match : Neur_chan_memb (HMM E-Value=9.2e-05)
Length = 131
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/114 (34%), Positives = 62/114 (54%)
Query: 44 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXX 103
N+S + RS Y+L +Y S +IV ISW+ F + + T AR+++G
Sbjct: 2 NFSAVVAVFSIERSYTYFLTHVYGTSCVIVFISWMGFVIPPDQTAARIAVGVTTLLTQVT 61
Query: 104 XXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFT 157
N+++PK+SYVKSID +L +C + VF SL+EY + + + R Q+ T
Sbjct: 62 VINILNSSMPKVSYVKSIDKFLISCLIFVFLSLIEYCVILILDGKRTRRHQQHT 115
>SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10)
Length = 306
Score = 78.2 bits (184), Expect = 7e-15
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 3 DIRYKWNEGPNSVGVSS-EVSLPQFKVLGHRQRAMEISLTTG--NYSRLACEIQFVRSMG 59
++ YKW E VG+S + +F+V + E T G +YS L + F R +
Sbjct: 33 ELVYKWGE-EGRVGMSILNTDMAEFEVTNMERLERETEFTNGLGSYSELILKFTFKRRLV 91
Query: 60 YYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPK 114
Y L+QIY P+ LIVI+SW SFW+++NA PARV+LG +++PK
Sbjct: 92 YSLLQIYAPTILIVILSWFSFWISKNAIPARVALGATTVLTIVTLNGSLRSSVPK 146
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 113 PKISYVKSIDVYLGTCFVMVFASLLEYATV 142
P +SYVK++D YL F+ VF ++LEY V
Sbjct: 190 PWVSYVKALDWYLIVSFLFVFGAVLEYVAV 219
>SB_13579| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00056)
Length = 194
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 1 MRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGY 60
+ DI Y+W + + + E++ +F++ R ++ G Y+ L + F R + Y
Sbjct: 33 INDIDYRWKAKEDLIILDGEMN--EFELKDSRGERKQVEYVIGTYTHLVAKFVFRRRLAY 90
Query: 61 YLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPK 114
IQIY P+ LIV++SW+SFW++++A PARV+LG ++PK
Sbjct: 91 SFIQIYSPTFLIVVLSWLSFWISKDAVPARVALGITTVLTIVTLMGSLRNSVPK 144
>SB_45611| Best HMM Match : p450 (HMM E-Value=0)
Length = 847
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 63 IQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSID 122
+++Y P+ LIV +SW++FW+ R+A PAR++L PK+SYVK++D
Sbjct: 263 LKVYAPTTLIVALSWLAFWIPRDAVPARITLSVTTILTIVTLMGSFRTQFPKVSYVKAVD 322
Query: 123 VYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKKIQI 170
V+L F+ VF+S LE V + + RK A + +E + +
Sbjct: 323 VFLIVSFLFVFSSALELVLVLIHSNMKKDRKHSVPASAEDTMEVDVLV 370
>SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12)
Length = 1286
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 62 LIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSI 121
++QIY P+ LIV +SW+SFW+++ A PARV+LG PK+SY+K+I
Sbjct: 1015 VLQIYAPTMLIVSLSWLSFWISKEAVPARVTLGVTTILTIVTLIGSFRFQFPKVSYIKAI 1074
Query: 122 DVYLGTCFVMVFASLLEYATV 142
D + FV VF + +E+ V
Sbjct: 1075 DWFFIVSFVFVFGAQIEFIAV 1095
>SB_10099| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.6e-17)
Length = 629
Score = 72.1 bits (169), Expect = 4e-13
Identities = 33/76 (43%), Positives = 42/76 (55%)
Query: 41 TTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXX 100
T N+S L + R +GY+LI YIPS +IVIISW+SFW++ PARV+LG
Sbjct: 508 TARNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAPARVALGITTVLT 567
Query: 101 XXXXXXXXNAALPKIS 116
A LPK S
Sbjct: 568 MTTLISSARANLPKAS 583
>SB_8533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 71.7 bits (168), Expect = 6e-13
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 15 VGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVI 74
+ + +++ +P+F++ + + +TGN+S L +F R + YYL + YIP+ L V+
Sbjct: 15 LSIDNQIKIPKFELSKVLRWENLLKFSTGNFSALTVGFRFRREVYYYLFRFYIPASLTVV 74
Query: 75 ISWVSFWLNRNATPARVSL 93
+SWVSFW++ ATPAR+SL
Sbjct: 75 MSWVSFWISPLATPARISL 93
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 117 YVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRF 156
Y S DVY+ CFV VF L+EYA V Y+ + + K+ F
Sbjct: 157 YHWSFDVYMMMCFVFVFGCLVEYAAVHYLLRDDKYNKKVF 196
>SB_30690| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-09)
Length = 193
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 77 WVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASL 136
WV FW++ + PARVSLG + LP++ Y+K+IDVYL F+ VFASL
Sbjct: 2 WVGFWIDERSVPARVSLGITTVLAITTLIFGVQSTLPRVGYIKAIDVYLLGNFLFVFASL 61
Query: 137 LEYATVGYMAKRIQMRKQR 155
+EYA + + K + +KQR
Sbjct: 62 VEYAIMCSIFKTNE-QKQR 79
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 43 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXX 102
GNY+ L+ R +GYY IQ+Y+P +V++SW+ FW+N T R+++G
Sbjct: 254 GNYTLLSASFPMHRRIGYYAIQMYVPCTFLVMLSWIVFWMNPEETGNRLTVGITTILTIV 313
Query: 103 XXXXXXNAALPKIS 116
N+ LPK+S
Sbjct: 314 FLLGYTNSTLPKVS 327
>SB_31582| Best HMM Match : Neur_chan_memb (HMM E-Value=0.58)
Length = 253
Score = 62.1 bits (144), Expect = 5e-10
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 2 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYY 61
R I + W G N++ ++ LPQ+ + GN+S + F R+ Y+
Sbjct: 42 RHITFVWELGMNTIPERLKI-LPQYNLKEVALSTTYNVYVVGNWSGVKATFAFERTYSYF 100
Query: 62 LIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 94
+ +Y PS +IV+ISW+ F L R+ PAR++LG
Sbjct: 101 IYHVYAPSAIIVVISWIGFVLPRDKPPARITLG 133
>SB_10344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 4 IRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLI 63
+ + W +G N + + ++ L +F + ++++ G Y L F R +G+YLI
Sbjct: 35 VAFHW-KGRNPITIFNK-ELSEFDMEQWLIEEVDMTYVAGKYRNLKVTFIFRRRLGFYLI 92
Query: 64 QIYIPSGLIVIISWVSFWLNRNATPARVSLG 94
Y+P ++VI+SW+ FW++ ++ R+SLG
Sbjct: 93 NFYVPCVVMVIMSWIVFWMDSSSIGERISLG 123
>SB_10532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 45 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXX 104
++ L F R + +++ + P+ ++VI+SW FW++ A PARVSLG
Sbjct: 3 FASLKAVFSFKRRIEFFIFSAFTPAIILVILSWCCFWISSQAVPARVSLGITTILTTILL 62
Query: 105 XXXXNAALPK 114
N+ +P+
Sbjct: 63 SSSVNSNMPR 72
>SB_49966| Best HMM Match : Neur_chan_memb (HMM E-Value=0.064)
Length = 100
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 77 WVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASL 136
WV FW++ + R+++G N LPK+SY K +D YL T F VF SL
Sbjct: 2 WVVFWMSPENSADRLTVGITTILTIVFLLGYVNGMLPKVSYPKGVDWYLMTSFFFVFMSL 61
Query: 137 LEYATVGYMAKRIQMRKQR 155
+E V + + + ++++
Sbjct: 62 VECVVVDRLLLKRKAQEEK 80
>SB_19928| Best HMM Match : Neur_chan_memb (HMM E-Value=4e-08)
Length = 173
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 93 LGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMR 152
+G +LPK+SYVKS++++L CF+ VF+++LEY+ V Y+ R +++
Sbjct: 1 MGITTVLTMATLIGSARVSLPKVSYVKSLELFLIMCFLFVFSAILEYSFVSYLVFRQRVK 60
Query: 153 KQRFTAVQKM 162
+ A +++
Sbjct: 61 NREDYAQREL 70
>SB_55738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 115 ISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 155
+SYVK+ID YL C + VF S+LEY V Y+ + + KQ+
Sbjct: 1 VSYVKAIDWYLLLCLIFVFGSILEYTCVTYVISKKKRIKQK 41
>SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038)
Length = 406
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 115 ISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 155
+SYVK+ID YL C + VF S+LEY V Y+ + + KQ+
Sbjct: 1 VSYVKAIDWYLLLCLIFVFGSILEYTCVTYVISKKKRIKQK 41
>SB_47353| Best HMM Match : Neur_chan_memb (HMM E-Value=3.2)
Length = 133
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 110 AALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 155
+ LP++ Y+K+IDVYL F+ VFASL+EYA + + K + +KQR
Sbjct: 1 STLPRVGYIKAIDVYLLGNFLFVFASLVEYAIMCSIFKTNE-QKQR 45
>SB_10741| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.71)
Length = 281
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 116 SYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKKIQ 169
SYV S D+Y+ C+V VF +LLEYA V Y + + R+ Q+ +++ +Q
Sbjct: 171 SYVTSADMYILVCYVFVFCALLEYAVVHYFFV-YEKQIYRYQLQQQSLIDQSVQ 223
>SB_41127| Best HMM Match : Neur_chan_memb (HMM E-Value=5.9)
Length = 90
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 115 ISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQK 161
+SYVK++D YL CF+ VFA LLEY V Y+ +++R V +
Sbjct: 1 VSYVKAVDWYLIGCFLFVFAVLLEYTFVLYIDNVHNKKRKRHKHVPR 47
>SB_10744| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-22)
Length = 276
Score = 36.3 bits (80), Expect = 0.026
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 33 QRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIY--IPSGLIVIISWVSFWLNRNATP 88
+ AM ISL ++ C IQ+ R MG +++ ++ I ++ I +W+ + L TP
Sbjct: 140 ESAMSISLVERGDGKVVCGIQYARRMGIFMMAVFLVILVAMVFIYTWIGYKLWTRHTP 197
>SB_41472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 34.7 bits (76), Expect = 0.081
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 114 KISYVKSIDVYLGTCFVMVFASLLEYATV 142
++SYVK++DV+L FV VF+S LE V
Sbjct: 49 RVSYVKAVDVFLIVSFVFVFSSALELVLV 77
>SB_52529| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 415
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 33 QRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS--GLIVIISWVSF 80
+ AM ISL ++ C IQ+ R MG +++ +++ ++ I +W+ +
Sbjct: 298 ESAMSISLIERGDGKVVCGIQYARRMGIFMMAVFLVMLVAMVFIYTWIGY 347
>SB_14026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 112 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRI-QMRKQR 155
+P++SY K ID YL F+ VF +L+ + + KR ++RK R
Sbjct: 1 MPRVSYPKMIDWYLMGSFLFVFTTLIMCLLIYLLDKRTKKVRKDR 45
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 31.9 bits (69), Expect = 0.57
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 114 KISYVKSIDVYLGTCFVMVFASLLEYATV 142
++SY+KSID ++ F +FA+L+EY V
Sbjct: 1031 RVSYMKSIDHFMLISFGFIFAALIEYIIV 1059
>SB_4969| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-08)
Length = 367
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 3 DIRYKWNEGPNSVGVSSEVSLPQFKVLG 30
+I +W EG V +S +++LP F ++G
Sbjct: 290 EIVLRWEEGDTPVAISKDMNLPHFDIVG 317
>SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)
Length = 355
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 45 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXX 104
Y ++ I R +Y++ + +P+ LI ++++ SF++ R+S
Sbjct: 80 YPEISFVIHMQRRSLFYVVNLVLPNFLITLLAFFSFFIPVEC-GERMSFVITVLLSMTVF 138
Query: 105 XXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 137
++P S V I VY C V VF +L+
Sbjct: 139 LLLVAESIPPTSEAVPVIGVYYTFCIVEVFLALV 172
>SB_9235| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 579
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 121 IDVYLGTCFVMVF-ASLLEYATVGYMAKRIQMRKQRFTAVQKMAVEKKIQ 169
I Y+ TC F SLL+ +T G +R+ R ++ A ++ +E ++
Sbjct: 304 ISGYVATCNAAAFDVSLLDGSTTGAACRRLPRRLEKLEATPRLTLEMLLE 353
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 51 EIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGXXXXXXXXXXXXXXNA 110
+I R YY+I + P +++ ++++ F+L + + R+ +G +
Sbjct: 151 QINIRRRSLYYVINCFTPCLIMLALTFLGFYL-PSGSGERMGMGITVLLSLSIIQLMLSD 209
Query: 111 ALPKISYVKSIDVYLGTCFVMVFASLL 137
+LP + I Y G +F SL+
Sbjct: 210 SLPPNEEIPLIVRYYGLTMFNIFLSLV 236
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,298,640
Number of Sequences: 59808
Number of extensions: 236918
Number of successful extensions: 470
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 418
Number of HSP's gapped (non-prelim): 54
length of query: 269
length of database: 16,821,457
effective HSP length: 81
effective length of query: 188
effective length of database: 11,977,009
effective search space: 2251677692
effective search space used: 2251677692
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)
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