Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000639-TA|BGIBMGA000639-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like, IPR003893|Iroquois-class homeodomain
protein
(269 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 147 7e-38
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 56 3e-10
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 49 3e-08
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 38 8e-05
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 38 8e-05
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 38 8e-05
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 38 8e-05
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 38 8e-05
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 38 8e-05
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 38 8e-05
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 38 1e-04
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 38 1e-04
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 38 1e-04
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 38 1e-04
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 38 1e-04
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 37 2e-04
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 37 2e-04
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 36 2e-04
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 36 2e-04
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 36 4e-04
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 35 7e-04
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 35 7e-04
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 35 7e-04
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 34 0.001
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 34 0.001
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 33 0.002
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 33 0.002
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 33 0.002
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 33 0.002
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 33 0.002
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 33 0.003
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 31 0.009
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 30 0.021
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 30 0.021
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 30 0.021
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 28 0.064
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 28 0.064
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 28 0.064
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 28 0.085
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 25 0.79
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 25 0.79
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 1.8
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 3.2
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 22 5.6
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 21 7.4
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 9.8
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 147 bits (357), Expect = 7e-38
Identities = 66/70 (94%), Positives = 70/70 (100%)
Query: 6 ARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 65
ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 86 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 145
Query: 66 NKMTWEPRNR 75
NKMTWEP+N+
Sbjct: 146 NKMTWEPKNK 155
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 56.0 bits (129), Expect = 3e-10
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 62
N +R + T+ L+AWL +H +PYP++ +K LA T +T+ QV+ WF NARRR+
Sbjct: 334 NQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRI 392
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 49.2 bits (112), Expect = 3e-08
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 7 RRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 66
+R+N +++ + L + H NPYP++ K LA +T++QVS WF N R R KK
Sbjct: 233 KRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNI 292
Query: 67 KMTWEPRN 74
E N
Sbjct: 293 GKAQEEAN 300
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
++ NG ++ T T E N Y T+ +I +A +T Q+ WF N R
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 273
Query: 61 RLKKENKM 68
+ KKE+KM
Sbjct: 274 KWKKEHKM 281
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
++ NG ++ T T E N Y T+ +I +A +T Q+ WF N R
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 273
Query: 61 RLKKENKM 68
+ KKE+KM
Sbjct: 274 KWKKEHKM 281
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
++ NG ++ T T E N Y T+ +I +A +T Q+ WF N R
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 273
Query: 61 RLKKENKM 68
+ KKE+KM
Sbjct: 274 KWKKEHKM 281
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
++ NG ++ T T E N Y T+ +I +A +T Q+ WF N R
Sbjct: 170 VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 229
Query: 61 RLKKENKM 68
+ KKE+KM
Sbjct: 230 KWKKEHKM 237
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
++ NG ++ T T E N Y T+ +I +A +T Q+ WF N R
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 273
Query: 61 RLKKENKM 68
+ KKE+KM
Sbjct: 274 KWKKEHKM 281
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
++ NG ++ T T E N Y T+ +I +A +T Q+ WF N R
Sbjct: 2 VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 61
Query: 61 RLKKENKM 68
+ KKE+KM
Sbjct: 62 KWKKEHKM 69
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
++ NG ++ T T E N Y T+ +I +A +T Q+ WF N R
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 273
Query: 61 RLKKENKM 68
+ KKE+KM
Sbjct: 274 KWKKEHKM 281
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 37.5 bits (83), Expect = 1e-04
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
N R+ TR T L+ E N Y T+ +I +A ++T Q+ WF N R + K
Sbjct: 183 NKRTRQTYTRYQTLELE---KEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAK 239
Query: 64 KENKMT 69
K+ K T
Sbjct: 240 KDTKFT 245
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 37.5 bits (83), Expect = 1e-04
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
NG RR+ T E N Y T+ +I +A +T Q+ WF N R +LK
Sbjct: 220 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 279
Query: 64 KE 65
KE
Sbjct: 280 KE 281
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 37.5 bits (83), Expect = 1e-04
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
N R+ TR T L+ E N Y T+ +I +A ++T Q+ WF N R + K
Sbjct: 183 NKRTRQTYTRYQTLELE---KEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAK 239
Query: 64 KENKMT 69
K+ K T
Sbjct: 240 KDTKFT 245
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 37.5 bits (83), Expect = 1e-04
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
N R+ TR T L+ E N Y T+ +I +A ++T Q+ WF N R + K
Sbjct: 183 NKRTRQTYTRYQTLELE---KEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAK 239
Query: 64 KENKMT 69
K+ K T
Sbjct: 240 KDTKFT 245
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 37.5 bits (83), Expect = 1e-04
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
NG RR+ T E N Y T+ +I +A +T Q+ WF N R +LK
Sbjct: 2 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 61
Query: 64 KE 65
KE
Sbjct: 62 KE 63
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 36.7 bits (81), Expect = 2e-04
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
NG R + A T+S L E ++ Y + +I +A +T Q+ WF N R + K
Sbjct: 84 NGKRARTAY--TSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRMKFK 141
Query: 64 KENK 67
KE K
Sbjct: 142 KEEK 145
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 36.7 bits (81), Expect = 2e-04
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
NG R + A T+S L E ++ Y + +I +A +T Q+ WF N R + K
Sbjct: 104 NGKRARTAY--TSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRMKFK 161
Query: 64 KENK 67
KE K
Sbjct: 162 KEEK 165
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 36.3 bits (80), Expect = 2e-04
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
R+ TR T L+ E N Y T+ +I +A +T Q+ WF N R + KKENK
Sbjct: 246 RQTYTRYQTLELE---KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 302
Query: 68 MTWE 71
E
Sbjct: 303 TKGE 306
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 36.3 bits (80), Expect = 2e-04
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
R+ TR T L+ E N Y T+ +I +A +T Q+ WF N R + KKENK
Sbjct: 248 RQTYTRYQTLELE---KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 304
Query: 68 MTWE 71
E
Sbjct: 305 TKGE 308
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 35.5 bits (78), Expect = 4e-04
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 3 LNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 62
L +R++ T T L ++ YP + LA TK+T ++ WF+N R RL
Sbjct: 216 LKRKQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRARL 275
Query: 63 KKE 65
+K+
Sbjct: 276 RKQ 278
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 34.7 bits (76), Expect = 7e-04
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 12 TRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
T T L E N Y T+ +I +A ++ TQV WF N R + KK K
Sbjct: 258 TNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMK 313
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 34.7 bits (76), Expect = 7e-04
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 12 TRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
T T L E N Y T+ +I +A ++ TQV WF N R + KK K
Sbjct: 47 TNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMK 102
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 34.7 bits (76), Expect = 7e-04
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 12 TRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
T T L E N Y T+ +I +A ++ TQV WF N R + KK K
Sbjct: 47 TNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMK 102
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.001
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
++ T T + E N Y T+ +I +A ++ Q+ WF N R + KK+NK
Sbjct: 234 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 293
Query: 68 M 68
+
Sbjct: 294 L 294
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 90 SNDGKDALDGKDSGTGSSEDGD 111
S++ D DG+ S T + ED D
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDD 201
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.001
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
++ T T + E N Y T+ +I +A ++ Q+ WF N R + KK+NK
Sbjct: 234 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 293
Query: 68 M 68
+
Sbjct: 294 L 294
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 90 SNDGKDALDGKDSGTGSSEDGD 111
S++ D DG+ S T + ED D
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDD 201
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 33.5 bits (73), Expect = 0.002
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 65
R+ TR T L+ E N Y T+ +I +A +T Q+ WF N R +LKKE
Sbjct: 10 RQTYTRFQTLELE---KEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 64
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
NG R+ T T + L E N Y + +I +A +T QV WF N R + K
Sbjct: 1 NGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHK 60
Query: 64 KE 65
++
Sbjct: 61 RQ 62
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
NG R+ T T + L E N Y + +I +A +T QV WF N R + K
Sbjct: 132 NGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHK 191
Query: 64 KE 65
++
Sbjct: 192 RQ 193
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 33.5 bits (73), Expect = 0.002
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 65
R+ TR T L+ E N Y T+ +I +A +T Q+ WF N R +LKKE
Sbjct: 161 RQTYTRFQTLELE---KEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 215
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 33.5 bits (73), Expect = 0.002
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 65
R+ TR T L+ E N Y T+ +I +A +T Q+ WF N R +LKKE
Sbjct: 220 RQTYTRFQTLELE---KEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 274
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 32.7 bits (71), Expect = 0.003
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 63
+ + ++ T T++ L E N Y ++ +I +A +++ QV WF N R + K
Sbjct: 114 DASSKRIXTAFTSTQLLELEREFASNMYLSRLRRIEIATCLRLSEKQVKIWFQNRRVKYK 173
Query: 64 KEN 66
KE+
Sbjct: 174 KED 176
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.009
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
RK T ++ L+ ++ Y E+ LA +T TQV WF N R + KK K
Sbjct: 122 RKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMK 181
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 29.9 bits (64), Expect = 0.021
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 6 ARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 65
A ++ T T++ L E Y ++ +I +A ++ Q+ WF N R + KKE
Sbjct: 87 AGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKKE 146
Query: 66 --NKMTWEPRN 74
NK++ PR+
Sbjct: 147 QMNKVS-TPRS 156
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve
cord defective protein protein.
Length = 168
Score = 29.9 bits (64), Expect = 0.021
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 27 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 64
++ Y + E+ LA I ++T TQV WF N R + K+
Sbjct: 60 RQQRYLSAPEREHLASIIRLTPTQVKIWFQNHRYKTKR 97
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 29.9 bits (64), Expect = 0.021
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 6 ARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 65
A ++ T T++ L E Y ++ +I +A ++ Q+ WF N R + KKE
Sbjct: 78 AGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKKE 137
Query: 66 --NKMTWEPRN 74
NK++ PR+
Sbjct: 138 QMNKVS-TPRS 147
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 28.3 bits (60), Expect = 0.064
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 4 NGARRKNATRETTSTLKAWLNEHKKNPYPTK 34
N +R + T+ L+AWL +H +PYP++
Sbjct: 178 NQKKRGIFPKVATNILRAWLFQHLTHPYPSE 208
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 28.3 bits (60), Expect = 0.064
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 31 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRV 76
Y T K LA ++ Q+ WF N R + +K+NK E ++++
Sbjct: 181 YITIKRKSELAENLGLSERQIKIWFQNRRAKERKQNKKRIEEKSQI 226
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 28.3 bits (60), Expect = 0.064
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 29 NPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 67
N Y +K ++ LA +T QV WF N R + KK ++
Sbjct: 265 NAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQ 303
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 27.9 bits (59), Expect = 0.085
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 24 NEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 64
+E +N Y T+ + L+ + Q+ WF N R ++KK
Sbjct: 245 HEFAENRYLTERRRQQLSAELGLNEAQIKIWFQNKRAKIKK 285
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 24.6 bits (51), Expect = 0.79
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 2 DLNGARRKNA-TRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
D N R + A TRE + L+ E K Y ++ + LA + + + WF N R
Sbjct: 68 DQNIRRYRTAFTREQLARLE---KEFFKENYVSRPRRCELAAQLNLPESTIKVWFQNRRM 124
Query: 61 RLKKE 65
+ K++
Sbjct: 125 KDKRQ 129
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 24.6 bits (51), Expect = 0.79
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 5 GARRKNATRETTSTLKAWLNEHK----KNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 60
G +RK TT T +A L+ + K YP + +A+ + ++V WF N R
Sbjct: 64 GNQRKQRRERTTFT-RAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRA 122
Query: 61 RLKKENK 67
+ +++ K
Sbjct: 123 KCRQQQK 129
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/59 (22%), Positives = 26/59 (44%)
Query: 7 RRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 65
+R+ T T + L K YP + +A+ + ++V WF N R + +++
Sbjct: 127 QRRERTTFTRAQLDLLEGLFAKTRYPDIFMREEVAVKINLPESRVQVWFKNRRAKCRQQ 185
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 8 RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 57
++ T T + E N Y T+ +I +A ++ Q+ WF N
Sbjct: 234 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQN 283
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 90 SNDGKDALDGKDSGTGSSEDGD 111
S++ D DG+ S T + ED D
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDD 201
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 137 PESPEPYERPIHPAYQ 152
P SPEPY P Y+
Sbjct: 23 PHSPEPYPPRCPPIYE 38
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 21.4 bits (43), Expect = 7.4
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 110 GDRPQQRLDLLGQRTESEWSESRADSGPESPEPYE-RPI 147
G P L + QRT S S + S +SPEP RP+
Sbjct: 192 GASPLPLLVPIPQRTASTASSASNYSPSQSPEPESVRPL 230
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 134 DSGPESPEPYERPIHPAYQHLPSRAPPGSTPASA 167
D S P P PA H S ++PAS+
Sbjct: 907 DEDKPSVSPLTSPRQPAETHAGSPCRNSASPASS 940
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.310 0.129 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,782
Number of Sequences: 317
Number of extensions: 2074
Number of successful extensions: 49
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of query: 269
length of database: 114,650
effective HSP length: 56
effective length of query: 213
effective length of database: 96,898
effective search space: 20639274
effective search space used: 20639274
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 42 (21.0 bits)
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