Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000638-TA|BGIBMGA000638-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like, IPR003893|Iroquois-class homeodomain
protein
(462 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.) 139 4e-33
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 4e-09
SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_25710| Best HMM Match : Homeobox (HMM E-Value=4.8e-17) 48 1e-05
SB_48109| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_22870| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25) 43 6e-04
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26) 38 0.017
SB_5629| Best HMM Match : PAX (HMM E-Value=0) 38 0.017
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 38 0.017
SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.023
SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30) 38 0.023
SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45) 37 0.030
SB_58034| Best HMM Match : VWA (HMM E-Value=0) 36 0.052
SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.052
SB_37035| Best HMM Match : Homeobox (HMM E-Value=9.6e-09) 36 0.069
SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32) 35 0.12
SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22) 35 0.12
SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28) 35 0.12
SB_8061| Best HMM Match : Homeobox (HMM E-Value=5.1e-27) 34 0.21
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 34 0.21
SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28) 34 0.28
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_23338| Best HMM Match : Homeobox (HMM E-Value=3.1e-26) 33 0.48
SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.48
SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27) 33 0.48
SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.48
SB_22129| Best HMM Match : Homeobox (HMM E-Value=4.6e-26) 33 0.64
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.64
SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30) 33 0.64
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.64
SB_4115| Best HMM Match : Homeobox (HMM E-Value=9.4e-08) 33 0.64
SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) 32 0.85
SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.85
SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) 32 0.85
SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.85
SB_23988| Best HMM Match : F5_F8_type_C (HMM E-Value=5e-10) 32 1.1
SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32) 32 1.1
SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20) 32 1.1
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29) 31 1.5
SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_8775| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 31 2.0
SB_28281| Best HMM Match : Pou (HMM E-Value=0) 31 2.6
SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30) 31 2.6
SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29) 30 3.4
SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30) 30 3.4
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 30 3.4
SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25) 30 4.5
SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27) 30 4.5
SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20) 30 4.5
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 4.5
SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29) 30 4.5
SB_25357| Best HMM Match : Homeobox (HMM E-Value=8.3e-28) 30 4.5
SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_15581| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-11) 30 4.5
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 30 4.5
SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30) 29 6.0
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 29 6.0
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 29 7.9
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.9
SB_37787| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.9
SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.9
SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16) 29 7.9
>SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 139 bits (337), Expect = 4e-33
Identities = 62/70 (88%), Positives = 67/70 (95%)
Query: 14 ARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
ARRKNATRE+T TLKAWL EH+KNPYPTKGEKIMLAI+TKMTLTQVSTWFANARRRLKKE
Sbjct: 156 ARRKNATRETTSTLKAWLFEHRKNPYPTKGEKIMLAILTKMTLTQVSTWFANARRRLKKE 215
Query: 74 NKMTWEPKNK 83
NKMTW P+N+
Sbjct: 216 NKMTWSPRNR 225
>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 60.1 bits (139), Expect = 4e-09
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 15 RRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
++ +E+T L++WLN++ + PYP K L +T+++ TQV+TWFANARRRL +
Sbjct: 138 QKSTLPKEATRILQSWLNDNLEKPYPDAETKERLQQLTQLSKTQVNTWFANARRRLNRNR 197
Query: 75 K 75
+
Sbjct: 198 Q 198
>SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 58.0 bits (134), Expect = 1e-08
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 14 ARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 70
++R +++T +K WL +H +PYPT+ EK +A T +T+ QV+ WF NARRR+
Sbjct: 950 SKRGVLPKQATSIMKTWLFQHIMHPYPTEDEKRSIAQQTNLTILQVNNWFINARRRI 1006
>SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 810
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 21 RESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 70
+ +T +KAWL +H +PYP++ +K LA T +T+ QV+ WF NARRR+
Sbjct: 305 KAATNIMKAWLFQHLTHPYPSEEQKRSLAQETGLTILQVNNWFINARRRI 354
>SB_25710| Best HMM Match : Homeobox (HMM E-Value=4.8e-17)
Length = 108
Score = 48.4 bits (110), Expect = 1e-05
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 15 RRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
+R+N ++++T L + H NPYP++ K LA +++ Q+S WF N R R KK
Sbjct: 3 KRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELARKCNISVAQISNWFGNKRIRYKK 60
>SB_48109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 37 NPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 71
+PYPT EK LA +T +T+TQVS WF N R+R++
Sbjct: 201 SPYPTPREKHELAKMTDLTVTQVSNWFKNKRQRVR 235
>SB_22870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 15 RRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
RR+ T S TLK L H+ N Y T+ + LA +T TQV WF N R + K+
Sbjct: 117 RRQRTTFTSEQTLKLELEFHQ-NEYITRSRRFELAACLNLTETQVKIWFQNRRAKDKRLE 175
Query: 75 KMTWEPKNKAXXXXXTM 91
K E + + TM
Sbjct: 176 KAQMEQQLRLASYTNTM 192
>SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25)
Length = 200
Score = 42.7 bits (96), Expect = 6e-04
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 12 LAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 71
LA +R+ T ++ LK ++ K + Y T E+ M+A ++T Q+ TWF N R + K
Sbjct: 93 LAKKRRKRTAFTSFQLKCLEDKFKFSKYLTIAERDMMARSLQLTNRQIKTWFQNRRTKWK 152
Query: 72 KEN 74
+EN
Sbjct: 153 REN 155
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 34 HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
+++N YPT EK ++A T +TL QVS WF N R+R
Sbjct: 153 YEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQR 188
>SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 17 KNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM 76
KN T ST L E N Y + +I +A ++T QV WF N R + KKENK+
Sbjct: 70 KNRTIYSTRQLVELEKEFHYNRYLCRPRRIEIAQSLELTEKQVKIWFQNRRMKWKKENKL 129
>SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 38.3 bits (85), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 15 RRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
+RK T +T L+ NE +N Y T+ + +A+ +T QV WF N R + K+
Sbjct: 145 KRKERTAFTTHQLRELENEFTRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKR 202
>SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 225
Score = 37.9 bits (84), Expect = 0.017
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
R+ T ++ LK+ + ++ Y T E+ LA +T TQV TWF N R + KK+
Sbjct: 100 RRRRTAFTSSQLKSLEEKFQEKKYLTISERNSLAKSMHLTNTQVKTWFQNRRTKWKKQ 157
>SB_5629| Best HMM Match : PAX (HMM E-Value=0)
Length = 383
Score = 37.9 bits (84), Expect = 0.017
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 12 LAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 71
L R+ TR ++ L +E +NPYPT E+ LA + ++V WF+N R + K
Sbjct: 274 LLLTRRTRTRFTSQQLHVLQSEFTRNPYPTLEERKELARYLCVCESRVQVWFSNKRAQDK 333
Query: 72 KENK 75
+ +
Sbjct: 334 RRTR 337
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 37.9 bits (84), Expect = 0.017
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
R+ T ++ LK+ + ++ Y T E+ LA +T TQV TWF N R + KK+
Sbjct: 939 RRRRTAFTSSQLKSLEEKFQEKKYLTISERNSLAKSMHLTNTQVKTWFQNRRTKWKKQ 996
>SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 37.5 bits (83), Expect = 0.023
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 7 GAGYDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 66
G G +RK T S L+ NE +N Y T+ + +A+ +T QV WF N
Sbjct: 134 GDGGKTTRKRKERTAFSKHQLQELENEFIRNNYLTRLRRYEIAVSLDLTERQVKVWFQNR 193
Query: 67 RRRLKK 72
R + K+
Sbjct: 194 RMKWKR 199
>SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30)
Length = 166
Score = 37.5 bits (83), Expect = 0.023
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
R+ T + L A N+ K Y + E++ LA+ +T TQV WF N R + KK+N
Sbjct: 49 RRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLGLTETQVKIWFQNRRTKWKKQN 107
>SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45)
Length = 527
Score = 37.1 bits (82), Expect = 0.030
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 11 DLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 70
+L +RK T + ++ NE ++N Y T+ + +A+ +T QV WF N R +
Sbjct: 88 NLGKKRKERTAFTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKW 147
Query: 71 KK 72
K+
Sbjct: 148 KR 149
>SB_58034| Best HMM Match : VWA (HMM E-Value=0)
Length = 1203
Score = 36.3 bits (80), Expect = 0.052
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKN 82
E ++ Y T+ ++ L+ +MT TQV TWF N R + +KE + P N
Sbjct: 1034 EFEEKRYLTETKRAELSKDLEMTETQVKTWFQNRRTKWRKEKMLRVIPDN 1083
Score = 35.5 bits (78), Expect = 0.091
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKN 82
E N Y T+ ++ L+ MT TQV TWF N R + +K+ P N
Sbjct: 1133 EFSGNKYLTESKREQLSKDLGMTETQVKTWFQNRRTKWRKKKMQRMLPDN 1182
>SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 36.3 bits (80), Expect = 0.052
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
E K+ Y T+ ++ L+ MT TQV TWF N R + +KE K
Sbjct: 219 EFKEEKYLTESKRAELSKDLGMTETQVKTWFQNRRTKWRKELK 261
>SB_37035| Best HMM Match : Homeobox (HMM E-Value=9.6e-09)
Length = 243
Score = 35.9 bits (79), Expect = 0.069
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 27 LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
L+ W + ++PYP +K LA T +T TQV WF N R+R
Sbjct: 144 LREW---YLQDPYPNPTKKRELAQATGLTPTQVGNWFKNRRQR 183
>SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32)
Length = 257
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
R+ T S+ L A + + + Y T+ ++ LA +T TQV WF N R + K+ NK
Sbjct: 107 RRPRTAFSSHQLLALERQFQLHKYLTRPQRYELATSLMLTETQVKIWFQNRRMKWKRCNK 166
>SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22)
Length = 441
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 9 GYDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 68
G + +RK T S L+ ++ ++NP P+ E +A + V WF N ++
Sbjct: 228 GLRVCKKRKRRTSFSNEALRLLISHFEQNPKPSSSEIAQIASKLGLEPVTVRVWFCNRKQ 287
Query: 69 RLKK 72
LK+
Sbjct: 288 MLKR 291
>SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28)
Length = 561
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 10 YDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
Y + R+ T ++ LK + ++ Y T E+ LA ++ TQV TWF N R +
Sbjct: 428 YHSSKSRRKRTAFTSSQLKYLEEKFQEKKYLTISERNELAKSMYLSDTQVKTWFQNRRTK 487
Query: 70 LKKE 73
KK+
Sbjct: 488 WKKQ 491
>SB_8061| Best HMM Match : Homeobox (HMM E-Value=5.1e-27)
Length = 418
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 35 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
++ Y + E+ LA I +T TQV WF N R + KK+N
Sbjct: 112 RQQRYLSAPEREQLARIINLTPTQVKIWFQNHRYKFKKQN 151
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 15 RRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
+R+N T + L+ +K YP + LA+ +T +V WF N R + +K
Sbjct: 404 KRRNRTTFTAYQLEEMERVFQKTHYPDVYTREQLALRCALTEARVQVWFQNRRAKWRKRE 463
Query: 75 KMTWEP 80
+ T P
Sbjct: 464 RFTQVP 469
>SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28)
Length = 222
Score = 33.9 bits (74), Expect = 0.28
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 RRKNATRESTGTLKAWLNEH-KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
++K A TG L + + Y T E+ +A + +T TQV WF N R + KK+
Sbjct: 108 KKKKARTTFTGRQIFELEKQFEAKKYLTATERSDMASLLNVTETQVKIWFQNRRTKWKKQ 167
Query: 74 NKMTWEPKN 82
K E N
Sbjct: 168 EKEINEDAN 176
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 12 LAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 71
L RR++ T + L+ + N YP + LA+ + +++ WF N R +++
Sbjct: 317 LPKRRRSRTNFDSWQLEELEKIYHHNQYPDVFTREALALKLDLLESRIQVWFQNRRAKMR 376
Query: 72 KENKMTWEP 80
+E K+ P
Sbjct: 377 REEKVKAVP 385
>SB_23338| Best HMM Match : Homeobox (HMM E-Value=3.1e-26)
Length = 275
Score = 33.1 bits (72), Expect = 0.48
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 11 DLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 70
D+A +KN + S + + Y E+ LA+ MT QV TWF N R +
Sbjct: 94 DIAVPKKNRSSFSAEQVFRLEKTFELQQYLGTKERQQLALALNMTDNQVKTWFQNRRMKQ 153
Query: 71 KKE 73
K++
Sbjct: 154 KRK 156
>SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 33.1 bits (72), Expect = 0.48
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
Y TK + +A + +T QV WF N R + KK+NK
Sbjct: 172 YLTKERRTEMARMLDLTERQVKIWFQNRRMKWKKDNK 208
>SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27)
Length = 308
Score = 33.1 bits (72), Expect = 0.48
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
RK T S+ L+ K Y E+ LA +T TQV WF N R + KK K
Sbjct: 175 RKPRTIYSSFQLRELNKRFIKTQYLALPERADLAAYLGLTQTQVKIWFQNRRSKFKKTLK 234
Query: 76 MT 77
++
Sbjct: 235 VS 236
>SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 33.1 bits (72), Expect = 0.48
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
R+N T +T L +K+ YP + LA+ + +V WF N R + ++E K
Sbjct: 86 RRNRTTFTTFQLHELERAFEKSHYPDVYTREELALKISLPEVRVQVWFQNKRAKWRREEK 145
Query: 76 M 76
M
Sbjct: 146 M 146
>SB_22129| Best HMM Match : Homeobox (HMM E-Value=4.6e-26)
Length = 366
Score = 32.7 bits (71), Expect = 0.64
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 35 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
++ Y + E+ LA I +T TQV WF N R + KK+
Sbjct: 244 RQQKYLSANEREQLARIIDLTPTQVKIWFQNHRYKFKKQ 282
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 32.7 bits (71), Expect = 0.64
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 15 RRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
+R+ T ++ L+ +N YP + +A+ T +T +V WF N R + +K+
Sbjct: 741 QRRQRTHFTSFQLQQLEGTFGRNRYPDMQMREEIALYTNLTEARVRVWFKNRRAKWRKKE 800
Query: 75 K 75
K
Sbjct: 801 K 801
>SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30)
Length = 197
Score = 32.7 bits (71), Expect = 0.64
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 32 NEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK---ENKMTWEPKNKA 84
N +KN Y E+ LA ++ TQ+ WF N R + K+ E K T + N +
Sbjct: 108 NAFEKNHYIVGTERKQLASYLNLSETQIKVWFQNRRTKWKRQQAEEKATQQAANNS 163
>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 32.7 bits (71), Expect = 0.64
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 36 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
KN Y E+ LA K++ TQV WF N R + K++
Sbjct: 153 KNHYVVGTERKQLASYLKLSETQVKVWFQNRRTKWKRQ 190
>SB_4115| Best HMM Match : Homeobox (HMM E-Value=9.4e-08)
Length = 267
Score = 32.7 bits (71), Expect = 0.64
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 31 LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-LKKENKM 76
L E++ N +P K ++ LA + ++ TWFAN R R + NK+
Sbjct: 68 LQEYESNIHPNKEQRTRLAQELRTKEKRIRTWFANKRARDRRNRNKL 114
>SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)
Length = 133
Score = 32.3 bits (70), Expect = 0.85
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
Y T+ +I +A K+T Q+ WF N R + K+E K
Sbjct: 46 YLTRTRRIEIATTLKLTEMQIKIWFQNRRMKWKREFK 82
>SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 32.3 bits (70), Expect = 0.85
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
E N Y + LA K+T QV WF N R +LKK+ K
Sbjct: 117 EFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKKDEK 159
>SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)
Length = 428
Score = 32.3 bits (70), Expect = 0.85
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
Y T+ +I +A K+T Q+ WF N R + K+E K
Sbjct: 273 YLTRTRRIEIATTLKLTEMQIKIWFQNRRMKWKREFK 309
>SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 32.3 bits (70), Expect = 0.85
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
E +N Y ++ +I +A + ++ QV WF N R + KK+ K
Sbjct: 319 EFSQNRYLSRLRRIQIAALLDLSEKQVKIWFQNRRVKWKKDKK 361
>SB_23988| Best HMM Match : F5_F8_type_C (HMM E-Value=5e-10)
Length = 304
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 405 SVANPLGSGGGSGYCFPRHQQSPQRDPYHNPHHAPTNHQPNQPHH 449
S +PLG G S P HNPHHA N+QP + H
Sbjct: 98 SKPHPLGMEDGRIQDTSITASSTYSSPGHNPHHARLNNQPVKEKH 142
>SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32)
Length = 162
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 9 GYDLAARRKNA-TRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 67
G D R + A T E L+A E +K+ Y + ++ LA +T TQ+ WF N R
Sbjct: 22 GDDTKKRPRTAFTNEQIKDLEA---EFQKSKYLSVSRRMELANSLSLTETQIKIWFQNRR 78
Query: 68 RRLKKE 73
+ K++
Sbjct: 79 TKWKRK 84
>SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20)
Length = 228
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
Y +K + LA +T QV TWF N R R +KE +
Sbjct: 144 YISKSRRSALAAEIDLTDAQVRTWFQNRRTRWRKEER 180
>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 9 GYDLAARRKNATRESTGT---LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 65
G D A+RK +T T L+ K YP + LA+ +T +V WF N
Sbjct: 277 GKDSTAKRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREALAVKIDLTEARVQVWFQN 336
Query: 66 ARRRLKKENK 75
R + +K K
Sbjct: 337 RRAKWRKREK 346
>SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29)
Length = 334
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 408 NPLGSGGGSGYCFPRHQQSPQRDPYHNPHHAPTNHQPNQPHH 449
+PLG GS S +P HNPHHA N+QP H
Sbjct: 151 HPLGMEDGSIQNTSITASSHWIEPGHNPHHARLNNQPVGGQH 192
>SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 10 YDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
Y+L ++K T + + + Y E+ LA +T TQV TWF N R +
Sbjct: 398 YELL-KKKPRTAFTESQISELEKRFQSQKYLGSKERSELAGTLGLTDTQVKTWFQNRRMK 456
Query: 70 LKKENK 75
LK++ +
Sbjct: 457 LKRQRQ 462
>SB_8775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 3 LKRYGAGYDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 62
LK + + A R T + K +L +H Y ++ +I + + ++ QV TW
Sbjct: 35 LKTSSSTSNHAPRSAFTTVQQLEIEKEFLYDH----YVSRVRRIEIVMALDLSEKQVRTW 90
Query: 63 FANARRRLKKENK 75
F N R +LK+E K
Sbjct: 91 FQNRRMKLKREAK 103
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 421 PRHQQSPQRDPYHNPHHAPTNHQPNQPH 448
P QQS Q+ P H P QPNQ H
Sbjct: 250 PGQQQSNQQQPPQQQQHGPGQMQPNQQH 277
>SB_28281| Best HMM Match : Pou (HMM E-Value=0)
Length = 250
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 7 GAGYDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 66
G + RRK T +A N K P+ E + +A ++ V WF N
Sbjct: 169 GEKFGAERRRKRRTTIGLAAKEALENHFMKQTKPSSPEIVRIADGLRLDKEVVRVWFCNR 228
Query: 67 RRRLKK 72
R+R K+
Sbjct: 229 RQREKR 234
>SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30)
Length = 315
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
E ++ Y E+ LA +T TQV WF N R + +K+
Sbjct: 266 EFERQQYMVGAERHYLAASLNLTETQVKVWFQNRRIKWRKQ 306
>SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29)
Length = 294
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
RK+ T + L+ + Y + LA I + QV TWF N R + KK+N
Sbjct: 169 RKSRTVFTDLQLRVLEKTFSEQKYLDSTNRAKLAQILGLNEAQVKTWFQNRRMKWKKKN 227
>SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30)
Length = 287
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
E Y E+ LA +T TQV WF N R + +K+N
Sbjct: 229 EFDNQQYIVGTERFYLATELGLTETQVKVWFQNRRIKWRKQN 270
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 30.3 bits (65), Expect = 3.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 423 HQQSPQRDPYHNPHHAPTNHQPNQPHHN 450
H+ R YH+ HH NH + HHN
Sbjct: 36 HKLKNPRHRYHHHHHHQHNHHQHHHHHN 63
>SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
RK+ T + L+ + Y + LA + TQV TWF N R + KKE+
Sbjct: 511 RKSRTVFTDLQLRVLEKTFSEQKYLDTSSRAKLAQTLGLNETQVKTWFQNRRMKWKKES 569
>SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25)
Length = 389
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 77
Y TK ++ LA + +T QV WF N R + +++ + T
Sbjct: 338 YLTKADRHQLASMLGLTDNQVKVWFQNRRMKWRQDARET 376
>SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27)
Length = 116
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 35 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 77
++ Y E+ LA +T TQV WF N R R +K T
Sbjct: 70 ERQQYVAGEERRQLATGLNLTETQVKVWFQNRRIRFRKHRLKT 112
>SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
R++ TR + +K YP + LA ++ +V WF+N R RL+KE
Sbjct: 549 RRSRTRFTVSQTDELERAFRKTHYPDIYAREELAQRLGLSEARVQVWFSNRRARLRKE 606
>SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20)
Length = 398
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 75
Y E+ LA MT QV TWF N R ++K++ +
Sbjct: 264 YVCSSERQKLAKELNMTDQQVKTWFQNRRMKVKRKRQ 300
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 4.5
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Query: 256 ARGRGVAPQSDEERKGDEMLQGMHHQLLSYGIKEESKRTSDCGVPIPASKPKIWSLADTA 315
AR AP S E K + ++ + + Y +K E T+ + K A
Sbjct: 601 ARSSNAAPGSGELEKLRKEIEKLKEE---YALKTEEYNTTISELRRDLEKASTKEAATPE 657
Query: 316 ACKTPPPAAQPWPQHSYGPPERAAPIDGSS 345
A PPP P Q PP P+ G +
Sbjct: 658 AGPPPPPPPPPGGQAGGAPPPPPPPLPGGA 687
>SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 11 DLAARRKNATRESTGTLKAWLNEHK--KNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 68
D RRK TR + + E Y + E+ LA +T TQV WF N R
Sbjct: 207 DSKKRRKKKTRTVFSRSQVYQLESTFDMKRYLSSSERAGLASQLHLTETQVKIWFQNRRN 266
Query: 69 RLKKE 73
+ K++
Sbjct: 267 KWKRQ 271
>SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29)
Length = 651
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 8 AGYDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 67
+G + R++ T S LK + N Y E+ +A ++ QV WF N R
Sbjct: 537 SGSYVQKRKRARTAFSAEQLKKLEKRFQANHYIVGEERQKIAKDLDLSEAQVKVWFQNRR 596
Query: 68 RRLKKENKM 76
+ K++ ++
Sbjct: 597 TKFKRDQEL 605
>SB_25357| Best HMM Match : Homeobox (HMM E-Value=8.3e-28)
Length = 317
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 34 HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
H+K Y + E+ LA K+T TQV WF N R + K+
Sbjct: 151 HQK--YLSGPERADLAAALKLTETQVKIWFQNRRYKTKR 187
>SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 14 ARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
A + T + LK + Y ++ E+ +LA +MT QV WF N R + K++
Sbjct: 152 ANPRTRTHFTERQLKYLETYYSNGRYLSRDERTVLAQALEMTELQVRNWFQNRRYQRKQK 211
Query: 74 NK 75
+
Sbjct: 212 QE 213
>SB_15581| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-11)
Length = 133
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 430 DPYHNPHHAPTNHQPNQPHH 449
+P HNPHHA N+QP H
Sbjct: 19 EPGHNPHHARLNNQPVGGQH 38
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 29.9 bits (64), Expect = 4.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 6 YGAGYDLAARRKNATRESTGTLKAWLNEHKKN-----PYPTKGEKIMLAIITKMTLTQVS 60
YG DL A + R T+KA E K+ P P++ + LA T + + +
Sbjct: 139 YGLDEDLDAALASKRRGPRTTIKAKQLEALKSTFAATPKPSRNIREKLAQETGLNMRVIQ 198
Query: 61 TWFANAR---RRLKKENKMT 77
WF N R RRLK+ T
Sbjct: 199 VWFQNRRSKERRLKQSGGQT 218
>SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30)
Length = 205
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 73
RK+ T + L+ + Y + LA + TQV TWF N R + KKE
Sbjct: 121 RKSRTVFTDLQLRVLEKTFSEQKYLDTSSRSKLAQTLGLNETQVKTWFQNRRMKWKKE 178
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 33 EHKKNPYPTKGEKIMLAIITKMT--LTQVSTWFANARRRLKKENKMTWEP 80
+ ++P K + L + T M + +ST A+ R LK+EN TW+P
Sbjct: 540 QQMQSPTNRKELQTFLGLATYMDRFIPNLSTLTASLRELLKEENHFTWDP 589
>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
Length = 765
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 302 PASKPKIWSL-ADTAACKTPP-PAAQPWPQHSYGPPERAAPIDGS 344
PA +P + + ++ TPP P + P+P Y PP AP+ G+
Sbjct: 449 PAPQPTMQTTPTHSSTSHTPPTPISAPYPVEGYPPPLIYAPMSGA 493
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 421 PRHQQSPQRDPYHNPHHAPTNHQPNQP 447
PR + + RD Y N HH + QP+ P
Sbjct: 547 PRDRDNNARDRYENRHHGSRDRQPSFP 573
>SB_37787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 36 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
+ PY + E+ LA +T QV WF N R + K+
Sbjct: 40 EKPYLSYTERDQLARAVNLTAKQVKVWFQNKRYKTKE 76
>SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 36 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM 76
K PYP + LA +T ++ WF N R + +K K+
Sbjct: 84 KAPYPDVFAREELAAKLGLTEARIQVWFQNRRAKWRKREKL 124
>SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16)
Length = 99
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 74
Y + LA I + QV TWF N R + KK+N
Sbjct: 13 YLDSTNRAKLAQILGLNEAQVKTWFQNRRMKWKKKN 48
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,870,396
Number of Sequences: 59808
Number of extensions: 587452
Number of successful extensions: 1691
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1609
Number of HSP's gapped (non-prelim): 88
length of query: 462
length of database: 16,821,457
effective HSP length: 85
effective length of query: 377
effective length of database: 11,737,777
effective search space: 4425141929
effective search space used: 4425141929
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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