Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000638-TA|BGIBMGA000638-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like, IPR003893|Iroquois-class homeodomain
protein
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1342 - 36438869-36439459,36439567-36439627,36440751-364411... 60 3e-09
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 58 1e-08
12_02_1245 - 27308143-27308787,27308923-27308983,27309064-273094... 58 2e-08
11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158 58 2e-08
05_05_0075 + 22209322-22210041,22210323-22210391,22210775-222111... 56 6e-08
03_01_0456 - 3495537-3496205,3496304-3496364,3496447-3496829,349... 54 2e-07
03_01_0163 + 1323296-1323457,1323994-1324125,1324375-1324508,132... 52 1e-06
06_03_0929 - 26028345-26028390,26028474-26028610,26028695-260288... 50 3e-06
06_01_0061 + 527417-527856,527957-528017,528113-528685 50 4e-06
03_01_0167 + 1374578-1375243,1375895-1376277,1377947-1378007,137... 50 5e-06
02_01_0617 + 4625564-4625887,4626824-4626944,4627643-4627833,462... 49 7e-06
05_01_0224 - 1662818-1663033,1663183-1663266,1663315-1663434,166... 48 2e-05
01_02_0105 + 11171422-11171667,11171923-11172111 46 8e-05
03_05_0648 - 26403249-26403357,26405142-26405284,26405425-264056... 45 1e-04
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 43 4e-04
03_05_0645 - 26381559-26381819,26381899-26382105 40 0.004
08_02_0056 + 11751585-11751672,11751741-11752060,11755363-117554... 38 0.022
03_05_0985 - 29424698-29425183 36 0.090
12_01_0981 + 9931542-9931606,9931779-9933105 35 0.16
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 34 0.27
10_08_0749 - 20282982-20283632,20284081-20284141,20284828-202848... 33 0.48
03_05_1024 + 29802831-29804208,29804710-29804759,29805569-298059... 33 0.63
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 32 0.84
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 32 1.1
04_04_1518 - 34129542-34130001,34130567-34130652 32 1.1
08_02_0052 + 11699468-11699700,11699799-11699916,11699991-117006... 31 1.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.9
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 31 1.9
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 31 1.9
01_06_0968 + 33466574-33466607,33467087-33467115,33467438-334675... 31 1.9
09_03_0144 - 12728697-12729238,12729312-12729432 31 2.6
08_02_1239 + 25491034-25492378,25493719-25494575 30 4.5
08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675 30 4.5
06_02_0262 + 13563082-13563633 30 4.5
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 29 5.9
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 29 5.9
03_06_0116 + 31773295-31773603,31773800-31773946,31774080-317741... 29 5.9
01_05_0751 + 24904854-24905640,24905747-24905805 29 5.9
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 29 7.8
11_06_0610 - 25449085-25453284 29 7.8
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 29 7.8
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 7.8
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 29 7.8
07_03_1080 + 23815232-23817040 29 7.8
03_05_0982 - 29394513-29394719,29395314-29395327,29395652-293956... 29 7.8
01_06_1518 + 37925609-37925871,37925954-37926554 29 7.8
01_06_0040 - 25874308-25874611,25875743-25875822,25876764-258769... 29 7.8
01_05_0523 - 22915390-22915901,22916496-22916619,22916708-229168... 29 7.8
>01_06_1342 -
36438869-36439459,36439567-36439627,36440751-36441130,
36441955-36442761
Length = 612
Score = 60.5 bits (140), Expect = 3e-09
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 6 YGAGYDLAARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 65
+G +++ ++ + L+AWL EH +PYPT G+K MLA T +T QVS WF N
Sbjct: 364 FGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 423
Query: 66 ARRRLKK 72
AR RL K
Sbjct: 424 ARVRLWK 430
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 58.0 bits (134), Expect = 1e-08
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 KRYGAGYDLAARRKNATRE-STGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 62
++YG A R + E S L+AWL EH +PYP EK+MLA T +T +Q+S W
Sbjct: 372 QQYGLLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNW 431
Query: 63 FANARRRLKK 72
F NAR RL K
Sbjct: 432 FINARVRLWK 441
>12_02_1245 -
27308143-27308787,27308923-27308983,27309064-27309440,
27309657-27310517
Length = 647
Score = 57.6 bits (133), Expect = 2e-08
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 KRYGAGYDLAARRKNATRESTGT-LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 62
++YG A R + E++ T L+AWL EH +PYP EK+MLA T +T +Q+S W
Sbjct: 378 QQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNW 437
Query: 63 FANARRRLKK 72
F NAR RL K
Sbjct: 438 FINARVRLWK 447
>11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158
Length = 425
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
++ S L+AWL EH +PYP +KIMLA T +T +QVS WF NAR RL K
Sbjct: 113 QRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWK 169
>05_05_0075 +
22209322-22210041,22210323-22210391,22210775-22211145,
22212291-22212351,22212496-22213086
Length = 603
Score = 56.0 bits (129), Expect = 6e-08
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
++ + L+AWL EH +PYPT +K MLA T +T QVS WF NAR RL K
Sbjct: 365 QRGLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWK 421
>03_01_0456 -
3495537-3496205,3496304-3496364,3496447-3496829,
3496924-3497613
Length = 600
Score = 54.4 bits (125), Expect = 2e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
++ + L+AWL EH +PYP EK+MLA T ++ QVS WF NAR RL K
Sbjct: 336 QRGLPESAVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFINARVRLWK 392
>03_01_0163 +
1323296-1323457,1323994-1324125,1324375-1324508,
1324618-1324621
Length = 143
Score = 52.0 bits (119), Expect = 1e-06
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 22 ESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPK 81
++T LK W +H K PYPT+ +K L T + L Q++ WF N R+R N T K
Sbjct: 79 DTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQTSTLK 138
Query: 82 NK 83
+K
Sbjct: 139 SK 140
>06_03_0929 -
26028345-26028390,26028474-26028610,26028695-26028826,
26028901-26029109,26029554-26029674,26030730-26031080
Length = 331
Score = 50.4 bits (115), Expect = 3e-06
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 22 ESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
++ TLKAW H K PYPT+ +K L T + L Q++ WF N R+R
Sbjct: 252 DTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 299
>06_01_0061 + 527417-527856,527957-528017,528113-528685
Length = 357
Score = 50.0 bits (114), Expect = 4e-06
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
++ + L+AWL EH +PYP +K +LA T ++ +QVS WF NAR RL K
Sbjct: 125 QRGLPERAVAVLRAWLFEHFLHPYPNDVDKHILARQTGLSRSQVSNWFINARVRLWK 181
>03_01_0167 +
1374578-1375243,1375895-1376277,1377947-1378007,
1378721-1379386
Length = 591
Score = 49.6 bits (113), Expect = 5e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 27 LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
L+AWL EH +PYP+ +K +LA T ++ +QVS WF NAR RL K
Sbjct: 339 LRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWK 384
>02_01_0617 +
4625564-4625887,4626824-4626944,4627643-4627833,
4627910-4628041,4628132-4628269
Length = 301
Score = 49.2 bits (112), Expect = 7e-06
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 22 ESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPK 81
++ LKAW H K PYPT+ +K L T + L Q++ WF N R+R N + K
Sbjct: 237 DTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSGEK 296
Query: 82 NK 83
K
Sbjct: 297 TK 298
>05_01_0224 -
1662818-1663033,1663183-1663266,1663315-1663434,
1664527-1664655,1664743-1664988
Length = 264
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 12 LAARRKNAT-RESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
L R+K +++ L W N H + PYPT+ +K+ LA +T + Q++ WF N R+R
Sbjct: 52 LKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKR 110
>01_02_0105 + 11171422-11171667,11171923-11172111
Length = 144
Score = 45.6 bits (103), Expect = 8e-05
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 12 LAARRKNAT-RESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
L R+K +++ L W N H + PYPT+ +K+ LA T + Q++ WF N R+R
Sbjct: 52 LKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKR 110
>03_05_0648 -
26403249-26403357,26405142-26405284,26405425-26405675,
26405707-26405713
Length = 169
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 11 DLAARRKNAT----RESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 66
+++ ++KN+T R++ L W + H + PYP++ EK LA T + QV+ WF N
Sbjct: 52 EISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQ 111
Query: 67 RRR 69
R+R
Sbjct: 112 RKR 114
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 43.2 bits (97), Expect = 4e-04
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 21 RESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
+E+ L W H K PYP++ EKI LA T + Q++ WF N R+R
Sbjct: 472 KEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKR 520
>03_05_0645 - 26381559-26381819,26381899-26382105
Length = 155
Score = 39.9 bits (89), Expect = 0.004
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 11 DLAARRKNAT--RESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 68
+L+ ++K R++ L W H + PYP++ EK LA T + Q++ WF N R+
Sbjct: 37 ELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRK 96
Query: 69 R 69
R
Sbjct: 97 R 97
>08_02_0056 +
11751585-11751672,11751741-11752060,11755363-11755483,
11755950-11756137,11756224-11756355,11756535-11756577,
11757298-11757395
Length = 329
Score = 37.5 bits (83), Expect = 0.022
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 22 ESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPK 81
++T TLKAW H K PYPTK + T + T R K + ++ +PK
Sbjct: 264 DTTSTLKAWWQSHAKWPYPTKVSHYETEGLFAFTGGRQGTASPRNRATAKADQQLVHQPK 323
Query: 82 NK 83
K
Sbjct: 324 EK 325
>03_05_0985 - 29424698-29425183
Length = 161
Score = 35.5 bits (78), Expect = 0.090
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 7 GAGYDLAARRKNAT--RESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 64
G +L+ +RK +E+ L W H + P P++ EKI LA T + Q++ F
Sbjct: 38 GLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFI 97
Query: 65 NARRR 69
N R+R
Sbjct: 98 NQRKR 102
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 403 VPSVANPLGSGGGSGYCFPRHQQ-SP--QRDPYHNPHHAPTNHQPNQPHH 449
+ S GG + P HQ +P ++P+H PHH N +P+ PH+
Sbjct: 125 ISSTPTHFWEGGHGAHPEPYHQPYNPYYHQEPFHPPHHHQYNPEPHHPHY 174
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 33.9 bits (74), Expect = 0.27
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 421 PRHQQSPQRDPYHNPHHAPTNHQPNQPHHN 450
P H P P H PHH H P+ PHH+
Sbjct: 50 PPHHPHPPHHP-HPPHHPHPPHHPHPPHHH 78
Score = 32.7 bits (71), Expect = 0.63
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 423 HQQSPQRDPYHNPHHAPTNHQPNQPHHN 450
H +P +PHH P +H P+ PHH+
Sbjct: 22 HIFAPPPPHLRHPHHHPPHHHPHPPHHH 49
Score = 32.3 bits (70), Expect = 0.84
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 423 HQQSPQRDPYHNPHHAPTNHQPNQPHH 449
H P P H PHH P +H P+ PHH
Sbjct: 35 HHHPPHHHP-HPPHHHPPHH-PHPPHH 59
Score = 31.9 bits (69), Expect = 1.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 421 PRHQQSPQRDPYHNPHHAPTNHQPNQPH 448
P H + P P H+ H P +H P+ PH
Sbjct: 28 PPHLRHPHHHPPHHHPHPPHHHPPHHPH 55
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 421 PRHQQSPQRDPYHNPHHAPTNHQPNQPHH 449
P H P +H PHH H P+ PHH
Sbjct: 39 PHHHPHPPH--HHPPHHPHPPHHPHPPHH 65
Score = 30.3 bits (65), Expect = 3.4
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 423 HQQSPQRDPYHN---PHHAPTNHQPNQPHH 449
H P P H+ PHH H P+ PHH
Sbjct: 42 HPHPPHHHPPHHPHPPHHPHPPHHPHPPHH 71
>10_08_0749 -
20282982-20283632,20284081-20284141,20284828-20284872,
20285293-20285672,20286382-20287050
Length = 601
Score = 33.1 bits (72), Expect = 0.48
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
YP+ +K +LA T ++ +QV+ WF NAR RL K
Sbjct: 366 YPSDVDKHILARQTGLSRSQVANWFINARVRLWK 399
>03_05_1024 +
29802831-29804208,29804710-29804759,29805569-29805954,
29807753-29807813,29807921-29807941
Length = 631
Score = 32.7 bits (71), Expect = 0.63
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 16 RKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQV 59
++ S L++WL EH +PYP+ +K +LA T ++ Q+
Sbjct: 583 QRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQM 626
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 32.3 bits (70), Expect = 0.84
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 35 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR-----RLKKENKM 76
K++PYP++ K LA +T QV+ WF++ R KKEN +
Sbjct: 723 KEDPYPSRATKENLAQELGLTFNQVTKWFSSTRHYARVAATKKENNI 769
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 411 GSGGGSGYCFPRHQQSPQRDPYHNPHHAPTNHQPNQPHHNEGSAA 455
G GG GY Q PQ+ YH+ HQ Q H S++
Sbjct: 41 GGGGNHGYYGRGPQPQPQQQHYHHQAQQLHQHQQQQQHAQRNSSS 85
>04_04_1518 - 34129542-34130001,34130567-34130652
Length = 181
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Query: 404 PSVANPLGSGGGSGYCFPRHQQSPQRDPYHNPHHA------PTNHQPNQPHHNEG 452
P A+ + SG G G PR SP+R H+PH A PT PH +G
Sbjct: 86 PLAADVVSSGAGGGGADPRGSPSPRR---HHPHQASPLVSIPTRPPCRIPHRGQG 137
>08_02_0052 +
11699468-11699700,11699799-11699916,11699991-11700659,
11700741-11700842,11700921-11701181,11701838-11702009,
11702128-11702528,11703171-11703587
Length = 790
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 38 PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 72
P P + + LA MT TQ+ WF N R ++KK
Sbjct: 84 PNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKK 118
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 296 DCGVPIPASKPKIWSLADTAACKTPPPAAQPWPQHSYGPPERAAP 340
+C VP P P + + PPP P P HS PP P
Sbjct: 596 NCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPP 640
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 8 AGYDLAARRKNA-TRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 66
A LAA+R+N T++S ++ + + YP + A +T QV WF
Sbjct: 420 AANGLAAKRENTGTKKSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWFKER 479
Query: 67 RRRLKKENK 75
RR+ ++E +
Sbjct: 480 RRKERRETE 488
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 414 GGSGYCFPRHQQ--SPQRDPYHNPHHAPTNHQPNQPHHNEGSAAFKP 458
GG GY H Q P +H+ HH P Q + HH++ A P
Sbjct: 45 GGGGYESHSHHQYHLPDHHHHHHHHHPPPRVQHHHHHHHQQLPAPTP 91
>01_06_0968 +
33466574-33466607,33467087-33467115,33467438-33467595,
33468319-33468436,33468520-33468708,33469008-33469343,
33469468-33469569,33469696-33469890,33469993-33470155,
33470314-33470579,33470670-33470765,33470860-33471255,
33471403-33471501
Length = 726
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKN 82
+P G+K L+ T + L QV WF N R ++K M W+ +N
Sbjct: 81 HPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVK---TMCWKEEN 121
>09_03_0144 - 12728697-12729238,12729312-12729432
Length = 220
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 13 AARRKNATRESTGTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 71
AAR++ T E L+ E K+ P + K LA + QV+ WF N R R K
Sbjct: 90 AARKRRLTAEQVRALERSFEEEKRKLEPER--KSELARRLGIAPRQVAVWFQNRRARWK 146
>08_02_1239 + 25491034-25492378,25493719-25494575
Length = 733
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 297 CGVPIPASKPKIWSLADTAACKTPPPAAQPW 327
C P PA +PK ++ TPPP P+
Sbjct: 644 CSHPTPAERPKTMAITQILLRSTPPPEVPPF 674
>08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675
Length = 264
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 315 AACKTPPPAAQPWPQHSYGPPERAAPIDGSS 345
AA PPP+ QPW S + A IDG +
Sbjct: 141 AAAAPPPPSGQPWQHTSRRSGDGRAAIDGGN 171
>06_02_0262 + 13563082-13563633
Length = 183
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 308 IWSLADTAACKTPPPAAQPWPQHSYGPPERAAP 340
+W L+ +AA PPP W + G P+ AP
Sbjct: 133 VWPLSASAAGCLPPPPMAAWSATAAGCPDEVAP 165
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 299 VPIPASKPKIWSLADTAACKTPP-PAAQPWPQHSYGPPERAAP 340
VP S S A TAA PP P P P+H PP +P
Sbjct: 392 VPAAGSSTPSSSQAMTAAAPAPPSPPEPPSPRHPSSPPPLRSP 434
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 29.5 bits (63), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 310 SLADTAACKTPPPAAQPWPQHSYGPPERAAPID 342
S A T++ P+A+ P H + PP +AAP D
Sbjct: 43 SSASTSSPPVTSPSARQQPHHHHPPPPQAAPPD 75
>03_06_0116 +
31773295-31773603,31773800-31773946,31774080-31774158,
31777558-31778180
Length = 385
Score = 29.5 bits (63), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 39 YPTKGEKIMLAIITKMTLTQVSTWFANARRR 69
Y + EK+ LA T + Q+S WF N R+R
Sbjct: 296 YEQEVEKMTLAQTTGLDQKQISNWFINQRKR 326
>01_05_0751 + 24904854-24905640,24905747-24905805
Length = 281
Score = 29.5 bits (63), Expect = 5.9
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 231 RAAGLVGKCEINAQLKYKRDLNGHHARGRGVAPQSDEERKGDEMLQGMHHQLLSYGIKEE 290
+AA G+ + R A G G Q DE + + L I +
Sbjct: 146 KAAFYGGRASFSRSSNSARSARLFAAFGYGSPDQGDEANRRTPSRDVIRRYLSK--ISRQ 203
Query: 291 SKRTS-DCGVPIPASKPKIWSLADTAACKTPPP 322
+R + G + K + S A TAAC++PPP
Sbjct: 204 LRRVAPSAGADLRLRKSRSASAAQTAACQSPPP 236
>12_01_0927 +
9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 299 VPIPASKPKIWSLADTAACKTPP-PAAQPWPQHSYGPPERAAP 340
VP S S A TAA PP P P P+H PP +P
Sbjct: 380 VPAAGSSTPSSSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSP 422
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 292 KRTSDCGVPIPASKPKIWSLADTAACKTPPPAAQPWPQ----HSYGPPERAAP 340
+ +S VP +S P SL A PPP +P P S PPE++ P
Sbjct: 1101 EESSPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPP 1153
>11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 423 HQQSPQRDPYHNPHHAPTNHQPNQPHHNEGSAAFKPFYKR 462
H + D + N PT HH E S FY+R
Sbjct: 1196 HSEDNYEDSFINDQATPTGQFTQSVHHGENSGDMMAFYRR 1235
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 421 PRHQQSPQRDPYHNPHHAPTNHQPNQPHH 449
P+ P P +PH P H P PHH
Sbjct: 216 PKGAPPPPPPPPPSPHRHPAAHPPPPPHH 244
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 299 VPIPASKPKIWSLADTAACKTPP-PAAQPWPQHSYGPPERAAP 340
VP S S A TAA PP P P P+H PP +P
Sbjct: 393 VPAAGSSTPSSSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSP 435
>07_03_1080 + 23815232-23817040
Length = 602
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 411 GSGGGSGYCFPRHQQSPQRDPYHNPHHAPTNHQPNQPHH 449
G GGG GY + Q P + Y P+ N PHH
Sbjct: 59 GGGGGGGYYYGGQQPPPSQYYYLEPYQEECG---NAPHH 94
>03_05_0982 -
29394513-29394719,29395314-29395327,29395652-29395697,
29395798-29396040
Length = 169
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 42 KGEKIMLAIITKMTLTQVSTWFANARRR 69
+ +K+ LA T + L Q++ WF N R+R
Sbjct: 102 ESQKVALAESTGLDLKQINNWFINQRKR 129
>01_06_1518 + 37925609-37925871,37925954-37926554
Length = 287
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 281 QLLSYGIKEESKRTSDCGVPIPASKPKIWSLADTAACKTPPPAAQPWPQHSYGPPERAAP 340
+LLS GI ++ R G A+ + + A TAA + PA P + P AAP
Sbjct: 115 KLLSRGIDPQTHRPVSAGSSAAAASG-LTTTASTAAFPSLAPAPPPQQHRLHNPVHAAAP 173
Query: 341 IDGS 344
+ S
Sbjct: 174 SNAS 177
>01_06_0040 -
25874308-25874611,25875743-25875822,25876764-25876996,
25877285-25877354
Length = 228
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 41 TKGEKIMLAIITKMTLTQVSTWFANARRRLK-KENKMTWE 79
T +K LAI K+ QV WF N R R K K+ +M E
Sbjct: 100 TPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECE 139
>01_05_0523 -
22915390-22915901,22916496-22916619,22916708-22916844,
22917383-22917518,22917614-22917951,22919426-22919663
Length = 494
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 402 KVPSVANPLGSGGGSGY-CFPRHQQSPQRDPYHNPHHAPTNHQP 444
+ S+ NP+GS F R+ Q P R + PH +P P
Sbjct: 443 RAASLGNPIGSQSMKAQGTFARNGQQPMRSLSYGPHASPYRQSP 486
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.134 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,693,886
Number of Sequences: 37544
Number of extensions: 592684
Number of successful extensions: 2201
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2110
Number of HSP's gapped (non-prelim): 94
length of query: 462
length of database: 14,793,348
effective HSP length: 85
effective length of query: 377
effective length of database: 11,602,108
effective search space: 4373994716
effective search space used: 4373994716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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