Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000637-TA|BGIBMGA000637-PA|undefined
         (187 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   1.4  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.6  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 98  GVYGTPYPSTDQNPYPSIGVDSSAFYSPLVPTDRLPFARIEGKVYRSRY 146
           GV  +P  S  Q   P  G  S+   SPL P  R  F R  G+   +RY
Sbjct: 234 GVVTSPL-SQQQQAAPQ-GAASANLPSPLYPWMRSQFERKRGRQTYTRY 280


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 147 NEFGYSGVACEPESNRSW 164
           +E GY  +    E NRSW
Sbjct: 211 DELGYGLIVYSWEQNRSW 228


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,667
Number of Sequences: 429
Number of extensions: 1850
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 187
length of database: 140,377
effective HSP length: 54
effective length of query: 133
effective length of database: 117,211
effective search space: 15589063
effective search space used: 15589063
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)