Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000636-TA|BGIBMGA000636-PA|undefined
(71 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subun... 28 0.13
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 27 0.23
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 0.30
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 24 2.8
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 23 4.9
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 23 4.9
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 23 4.9
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 23 6.5
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 23 6.5
SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr... 22 8.6
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 22 8.6
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 22 8.6
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 22 8.6
SPAC664.08c |||traub transciption factor family protein |Schizos... 22 8.6
>SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subunit
Rpc31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 28.3 bits (60), Expect = 0.13
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 35 PSRHHDIVTSSDTPVRLPFWPEELHEKLSAVAAS 68
P R +D ++ SD + F+PEEL + L A +A+
Sbjct: 93 PKRKNDNLSLSDLDLDPKFFPEELRKTLGAASAT 126
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 27.5 bits (58), Expect = 0.23
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 3 HVNSYNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEEL 58
H+N+ P SI+ P P A+ + S+G S D + + + +++ +EL
Sbjct: 72 HLNTETPSFSVSIENPSKPSAAFNDASLGKKSTEHQIDGIRNGSSNLQMEGNDKEL 127
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 0.30
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 28 CSVGDFSPSRHHDIVTSSDTPVRLP---FW--PEELHEKLSAVAASI 69
C + DF S+H D V +D + + FW PE +H +A +
Sbjct: 969 CKISDFGISKHSDNVYDNDANLSMQGSIFWMAPEVIHNDHQGYSAKV 1015
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 23.8 bits (49), Expect = 2.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 12 VTSIDGPPSPGPAYANCSVG 31
+ ID P+ GP + +CS G
Sbjct: 614 IRCIDKVPNDGPMFVHCSAG 633
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 23 PAYANCSVGDFSPSRHHDIVTSSDTP 48
P+ ++ SV F P R + ++SD P
Sbjct: 239 PSSSSSSVAPFVPRRQFSVSSASDPP 264
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 23.0 bits (47), Expect = 4.9
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 4 VNSYNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLS 63
+N N +G + + G + NC+ ++ S + + D ++PF+ E +L
Sbjct: 284 LNGRNGLGSIFVFASGNGGHYHDNCNFDGYTNSIFSATIGAVDAEHKIPFYSEVCAAQLV 343
Query: 64 AVAAS 68
+ +S
Sbjct: 344 SAYSS 348
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 25 YANCSVGDFSPSRHHDIVTSSD 46
++ VG SP HHDI + D
Sbjct: 1048 HSTAGVGLISPPPHHDIYSIED 1069
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 12 VTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTP 48
++S PPS P YA + S H SS P
Sbjct: 561 LSSAPNPPSVMPTYARKTSSHSERSSHSSYHNSSHVP 597
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 3 HVNSYNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVT 43
H+N + + G P GP + DF PS H +V+
Sbjct: 764 HLNLHKTFCIPHGGGGPGVGPICVKKHLADFLPS--HPVVS 802
>SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 308
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 27 NCSVGDFSPSRHHDIVTSSDTP 48
N S G PSR + + S TP
Sbjct: 129 NSSAGATGPSRRRQVSSGSSTP 150
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 22.2 bits (45), Expect = 8.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 32 DFSPSRHHDIVTSSDTPVRL 51
DF+ +HD +SS TP +
Sbjct: 576 DFTMEYNHDFFSSSKTPTNI 595
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 22 GPAYANCSVGDFSPSRHHDIVTSSDT 47
GP Y+ C D PS SS T
Sbjct: 97 GPYYSQCIPVDIDPSSSSSSAASSTT 122
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 9 PIGVTSIDGPPSPGPAYANCSVGDFSPS 36
P +S+ P P A+ VG+ PS
Sbjct: 63 PTNASSVATPSGTAPTSASLYVGELDPS 90
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 22.2 bits (45), Expect = 8.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 39 HDIVTSSDTPVRLPFWPEELHEKL 62
HD + + P+ + WP+E E L
Sbjct: 388 HDKLQNFMAPIEVTVWPDEQTEDL 411
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.132 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,420
Number of Sequences: 5004
Number of extensions: 14198
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 14
length of query: 71
length of database: 2,362,478
effective HSP length: 51
effective length of query: 20
effective length of database: 2,107,274
effective search space: 42145480
effective search space used: 42145480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)
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