Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000636-TA|BGIBMGA000636-PA|undefined
(71 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0166 - 32112140-32112877,32112888-32112977 31 0.15
10_05_0100 - 9161144-9161682,9161860-9162058 30 0.20
01_06_1403 - 37059177-37060499,37060898-37061177,37061263-370616... 29 0.35
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 27 1.4
04_04_1363 - 32898345-32898371,32898986-32899837,32900234-329005... 27 1.9
01_06_1814 + 40061080-40061395,40062243-40062641,40062758-40062864 26 3.2
07_03_0051 - 12831167-12832188,12832245-12832512 26 4.3
05_06_0015 + 24953918-24954359,24955622-24955857,24955945-249560... 26 4.3
03_06_0437 - 33912326-33912520,33912870-33912998,33913147-339133... 26 4.3
04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886... 25 5.7
03_02_0610 + 9834083-9834368,9834495-9834556,9834695-9834787,983... 25 5.7
01_06_1570 + 38312319-38314259 25 5.7
08_01_0097 + 694992-695204,696449-697111,697188-697322 25 7.5
06_01_0736 + 5442468-5442770 25 7.5
06_01_0008 + 141405-142421 25 7.5
11_03_0013 - 8957277-8957355,8957485-8957591,8957700-8957915,895... 25 9.9
08_02_1117 + 24407037-24407057,24407229-24407483,24407811-24408053 25 9.9
06_03_1159 + 28084786-28085428,28085520-28086166 25 9.9
06_01_0616 + 4467439-4467733,4469232-4469294,4469840-4471176,447... 25 9.9
02_01_0434 + 3158637-3159319,3159460-3159576,3160064-3160226,316... 25 9.9
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 25 9.9
01_06_0120 + 26622285-26622433,26623156-26623219,26623310-266233... 25 9.9
01_06_0063 + 26100877-26101144,26101683-26101990,26102133-261028... 25 9.9
01_01_1214 - 9793854-9794003,9795418-9795456,9795604-9795702,979... 25 9.9
>03_06_0166 - 32112140-32112877,32112888-32112977
Length = 275
Score = 30.7 bits (66), Expect = 0.15
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 32 DFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSAV 65
D P RHH SD ++LP PE +H + + V
Sbjct: 22 DPDPRRHHHNPQDSDGKIQLPHLPEVVHNRCACV 55
>10_05_0100 - 9161144-9161682,9161860-9162058
Length = 245
Score = 30.3 bits (65), Expect = 0.20
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 9 PIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSAV 65
P+G DG +P PA C VG +++ TP P P+E ++ V
Sbjct: 61 PVGELPDDGKAAPSPA--ECYVGTLFTKARDEVLHKYTTPTATPSTPKEERFRIQGV 115
>01_06_1403 -
37059177-37060499,37060898-37061177,37061263-37061696,
37061782-37061889
Length = 714
Score = 29.5 bits (63), Expect = 0.35
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 5 NSYNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHD 40
+SY I S DG PS A N V D+S SR HD
Sbjct: 391 SSYCDIKAPS-DGSPSMSDATLNSKVSDWSSSRFHD 425
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 8 NPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHE 60
N ++ D P A NC G+ P H D+ T+ P+ P+E E
Sbjct: 137 NQTTLSPADLPICSFAAGGNCPYGEECPQMHGDLCTTCGKMCLHPYRPDEREE 189
>04_04_1363 -
32898345-32898371,32898986-32899837,32900234-32900500,
32900723-32901025,32902329-32902433,32903361-32903548,
32903628-32903721
Length = 611
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 5 NSYNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHD 40
+SY I S DG PS A N V D+S S HD
Sbjct: 434 SSYCDIKAPS-DGSPSMSDATLNSKVSDWSSSSFHD 468
>01_06_1814 + 40061080-40061395,40062243-40062641,40062758-40062864
Length = 273
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 9 PIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPV 49
P+ V PP P P ++C++ + P R +V+ T +
Sbjct: 88 PVAVHGKPAPPPPPPPVSDCTI-NVCPKRKFGLVSDCTTEI 127
>07_03_0051 - 12831167-12832188,12832245-12832512
Length = 429
Score = 25.8 bits (54), Expect = 4.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 18 PPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKL 62
PPSP Y V F +V + TPV P + ELH L
Sbjct: 230 PPSPDRPYDLVGVALFGDGAGAAVVGADPTPVERPLF--ELHSAL 272
>05_06_0015 +
24953918-24954359,24955622-24955857,24955945-24956085,
24956188-24956619,24956847-24956948
Length = 450
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 13 TSIDGPPSPGPAYANCSVGDFSP 35
+S + PPSPGP CS+ + P
Sbjct: 343 SSPNPPPSPGPGPTKCSLLTYCP 365
>03_06_0437 -
33912326-33912520,33912870-33912998,33913147-33913317,
33913877-33913993,33914150-33914800
Length = 420
Score = 25.8 bits (54), Expect = 4.3
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 9 PIGVTSIDGPPSPGPAYANCSV--GDFSPSR 37
P G T D P +P PA A SV G SP+R
Sbjct: 159 PPGATGADPPDNPPPATAAASVQGGADSPAR 189
>04_04_0666 +
27086568-27086975,27087073-27087477,27088542-27088635,
27088731-27088768,27088853-27088999,27089167-27089266,
27090001-27090953,27091512-27091569,27092904-27093022
Length = 773
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 21 PGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEE 57
PGP + + D P ++ SD P+ LP PE+
Sbjct: 588 PGPIWDSEPKWDNGPKWDTELTWESDHPIELPGPPED 624
>03_02_0610 +
9834083-9834368,9834495-9834556,9834695-9834787,
9835689-9835805,9835972-9836055,9836198-9836293,
9836368-9836445,9836548-9836637,9836733-9836800,
9836940-9837021,9838203-9838289
Length = 380
Score = 25.4 bits (53), Expect = 5.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 4 VNSYNPIGVTSIDGPPSPGP 23
VN P GV + GPP P P
Sbjct: 62 VNGVGPAGVDGLAGPPVPVP 81
>01_06_1570 + 38312319-38314259
Length = 646
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Query: 11 GVTSIDGPPSPGPAYANCSVG 31
GV+S GP SPG ANC++G
Sbjct: 207 GVSSSAGPTSPGT--ANCALG 225
>08_01_0097 + 694992-695204,696449-697111,697188-697322
Length = 336
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 41 IVTSSDTPVRLPFWPEE 57
I+ S D VRLP WP E
Sbjct: 174 ILCSYDPNVRLPLWPSE 190
>06_01_0736 + 5442468-5442770
Length = 100
Score = 25.0 bits (52), Expect = 7.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 9 PIGVTSIDGPPSPGPA 24
P+GVT G P+P PA
Sbjct: 74 PVGVTEDGGSPAPAPA 89
>06_01_0008 + 141405-142421
Length = 338
Score = 25.0 bits (52), Expect = 7.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 8 NPIGVTSIDGPPSPGPAYANCSVGDFSPSRH-HDIVT 43
NP + + GPPSP P+ + + F PS HD T
Sbjct: 78 NPSDLAAFFGPPSPSPS-PSPAARHFDPSNFLHDHFT 113
>11_03_0013 -
8957277-8957355,8957485-8957591,8957700-8957915,
8958191-8958907,8959483-8959656,8960292-8960546
Length = 515
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 31 GDFSPSRHHDIVTSSDTPVRLPFWPEE 57
GD SP H + T + PFWP E
Sbjct: 103 GDSSPFHHASLDTDVAWLLLPPFWPPE 129
>08_02_1117 +
24407037-24407057,24407229-24407483,24407811-24408053
Length = 172
Score = 24.6 bits (51), Expect = 9.9
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 44 SSDTPVRLPFWPEELHEKLSAVAASIVI 71
S P R P W LH ++ VAASIVI
Sbjct: 8 SPSWPAR-PCWECCLHRRVGLVAASIVI 34
>06_03_1159 + 28084786-28085428,28085520-28086166
Length = 429
Score = 24.6 bits (51), Expect = 9.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 19 PSPGPAYANCSVG 31
PSP PA A+C VG
Sbjct: 177 PSPAPARASCEVG 189
>06_01_0616 +
4467439-4467733,4469232-4469294,4469840-4471176,
4472719-4473086,4473526-4473559,4473978-4474421
Length = 846
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 46 DTPVRLPFWPEELHEKLSAVAASI 69
D PVR+P + EEL K + V A I
Sbjct: 111 DEPVRMPVYLEELMNKNAQVEAII 134
>02_01_0434 +
3158637-3159319,3159460-3159576,3160064-3160226,
3160394-3160600
Length = 389
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 3 HVNSYNPIGVTSIDGPPSPGPAYANCSVGDFSPSRH 38
H + Y P G + GP PG A+A + P H
Sbjct: 65 HGHLYPPCGYQAQMGPAPPGAAFAKGVLAAAPPPPH 100
>01_06_1763 +
39723596-39723691,39724030-39724672,39724773-39725275,
39725786-39725905,39726356-39726421,39727146-39727256,
39727650-39727726,39727996-39728063,39728384-39728497,
39728593-39728774,39728926-39728994,39729294-39729449,
39729657-39729734
Length = 760
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 9 PIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDI 41
P + D P S GPA N V +P+ HD+
Sbjct: 100 PTSYSRGDEPLSNGPAPVNVPVSVSNPAPSHDV 132
>01_06_0120 +
26622285-26622433,26623156-26623219,26623310-26623399,
26623588-26623644,26623832-26623880,26624320-26624396,
26624918-26624957,26625037-26625131,26625525-26625689,
26625777-26625887,26625971-26626058,26626715-26626781,
26626955-26627063,26627155-26627272,26628345-26628590,
26628956-26629095,26629262-26629444,26629560-26629679,
26629932-26629967
Length = 667
Score = 24.6 bits (51), Expect = 9.9
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 1 MSHVNSYNPIGVTSIDGPPSPGPAYANC-SVGDFSP 35
M HV G + DG PS GPAY + + G F P
Sbjct: 3 MQHVVEVEQ-GRAAADGRPSVGPAYRSAFARGGFPP 37
>01_06_0063 +
26100877-26101144,26101683-26101990,26102133-26102849,
26103338-26103466,26103594-26103698,26103732-26103797,
26104102-26104302,26104437-26104562
Length = 639
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 23 PAYANCSVGDFSPSRHHDIVTSSDTPVR 50
P+ S D P HHD++++S +P R
Sbjct: 264 PSSCISSATDTFPEIHHDVISASISPRR 291
>01_01_1214 -
9793854-9794003,9795418-9795456,9795604-9795702,
9795779-9795907,9796473-9796619,9797513-9797643,
9798497-9798716,9798858-9798951,9799021-9799133,
9799799-9799903,9800008-9800112,9800762-9800849,
9800933-9801054,9801130-9801189,9802313-9802408,
9802506-9802658,9802752-9802838,9803995-9804062,
9804429-9804552,9805057-9805152,9805250-9805359,
9805459-9805573,9806877-9806942,9807260-9807420,
9807927-9808167
Length = 972
Score = 24.6 bits (51), Expect = 9.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 12 VTSIDGPPSPGPAYANCSVGDF 33
+T+ DGPPSP +G+F
Sbjct: 850 ITAADGPPSPAALNLARHIGEF 871
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,592,868
Number of Sequences: 37544
Number of extensions: 108028
Number of successful extensions: 204
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 188
Number of HSP's gapped (non-prelim): 24
length of query: 71
length of database: 14,793,348
effective HSP length: 51
effective length of query: 20
effective length of database: 12,878,604
effective search space: 257572080
effective search space used: 257572080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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