Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000636-TA|BGIBMGA000636-PA|undefined
(71 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 33 0.14
Y13901-1|CAA74200.1| 802|Homo sapiens fibroblast growth factor ... 29 1.8
EF571596-1|ABQ01235.1| 802|Homo sapiens fibroblast growth facto... 29 1.8
AF487555-1|AAM13666.1| 802|Homo sapiens fibroblast growth facto... 29 1.8
AF202063-1|AAF27432.1| 762|Homo sapiens fibroblast growth facto... 29 1.8
M85165-1|AAA03631.1| 431|Homo sapiens SAP-1A protein protein. 29 2.3
BC040145-1|AAH40145.1| 521|Homo sapiens ELK4, ETS-domain protei... 29 2.3
BC113395-1|AAI13396.1| 467|Homo sapiens Zic family member 3 het... 29 3.1
BC113393-1|AAI13394.1| 467|Homo sapiens Zic family member 3 het... 29 3.1
AL035443-2|CAI42303.1| 457|Homo sapiens Zic family member 3 het... 29 3.1
AL035443-1|CAB41648.1| 467|Homo sapiens Zic family member 3 het... 29 3.1
AF028706-1|AAC05594.1| 467|Homo sapiens zinc-finger protein of ... 29 3.1
D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein. 28 4.1
BC041564-1|AAH41564.1| 284|Homo sapiens paired-like (aristaless... 28 4.1
AF022724-1|AAB82744.1| 284|Homo sapiens ARIX homeodomain protei... 27 7.1
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 21 PGPA-YANCSVGDFSPSRHHDIVTSSDTPV-RLPFWPEELHEK 61
PGP AN ++ D SP R+ +V PV + PF+P E+ E+
Sbjct: 181 PGPTRLANSTIKDESPPRYRPLVLPKFPPVKKSPFFPHEIEEE 223
>Y13901-1|CAA74200.1| 802|Homo sapiens fibroblast growth factor 4
protein.
Length = 802
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 DFSPSRHHDIVTSSDTPVRLPFW--PEELHEKLSAVAA 67
D P H D+ P + P+W P+ + +KL AV A
Sbjct: 127 DEDPKSHRDLSNRHSYPQQAPYWTHPQRMEKKLHAVPA 164
>EF571596-1|ABQ01235.1| 802|Homo sapiens fibroblast growth factor
receptor 4 protein.
Length = 802
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 DFSPSRHHDIVTSSDTPVRLPFW--PEELHEKLSAVAA 67
D P H D+ P + P+W P+ + +KL AV A
Sbjct: 127 DEDPKSHRDLSNRHSYPQQAPYWTHPQRMEKKLHAVPA 164
>AF487555-1|AAM13666.1| 802|Homo sapiens fibroblast growth factor
receptor 4 protein.
Length = 802
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 DFSPSRHHDIVTSSDTPVRLPFW--PEELHEKLSAVAA 67
D P H D+ P + P+W P+ + +KL AV A
Sbjct: 127 DEDPKSHRDLSNRHSYPQQAPYWTHPQRMEKKLHAVPA 164
>AF202063-1|AAF27432.1| 762|Homo sapiens fibroblast growth factor
receptor 4, soluble-form splice variant protein.
Length = 762
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 DFSPSRHHDIVTSSDTPVRLPFW--PEELHEKLSAVAA 67
D P H D+ P + P+W P+ + +KL AV A
Sbjct: 127 DEDPKSHRDLSNRHSYPQQAPYWTHPQRMEKKLHAVPA 164
>M85165-1|AAA03631.1| 431|Homo sapiens SAP-1A protein protein.
Length = 431
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 2 SHVNSYNPIGVTSIDGPPSPGP 23
S +NS+ P ++ +DGP +PGP
Sbjct: 402 SVLNSHGPFTLSGLDGPSTPGP 423
>BC040145-1|AAH40145.1| 521|Homo sapiens ELK4, ETS-domain protein
(SRF accessory protein 1) protein.
Length = 521
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 2 SHVNSYNPIGVTSIDGPPSPGP 23
S +NS+ P ++ +DGP +PGP
Sbjct: 492 SVLNSHGPFTLSGLDGPSTPGP 513
>BC113395-1|AAI13396.1| 467|Homo sapiens Zic family member 3
heterotaxy 1 (odd-paired homolog, Drosophila) protein.
Length = 467
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 22 GPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSAVAAS 68
GP + VG F RHH++ + L + + H +A AA+
Sbjct: 8 GPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAA 54
>BC113393-1|AAI13394.1| 467|Homo sapiens Zic family member 3
heterotaxy 1 (odd-paired homolog, Drosophila) protein.
Length = 467
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 22 GPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSAVAAS 68
GP + VG F RHH++ + L + + H +A AA+
Sbjct: 8 GPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAA 54
>AL035443-2|CAI42303.1| 457|Homo sapiens Zic family member 3
heterotaxy 1 (odd-paired homolog, Drosophila) protein.
Length = 457
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 22 GPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSAVAAS 68
GP + VG F RHH++ + L + + H +A AA+
Sbjct: 8 GPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAA 54
>AL035443-1|CAB41648.1| 467|Homo sapiens Zic family member 3
heterotaxy 1 (odd-paired homolog, Drosophila) protein.
Length = 467
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 22 GPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSAVAAS 68
GP + VG F RHH++ + L + + H +A AA+
Sbjct: 8 GPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAA 54
>AF028706-1|AAC05594.1| 467|Homo sapiens zinc-finger protein of
the cerebellum 3 protein.
Length = 467
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 22 GPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSAVAAS 68
GP + VG F RHH++ + L + + H +A AA+
Sbjct: 8 GPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAA 54
>D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.
Length = 1696
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 36 SRHHDIVTSSDTPVRLPFWPEELHEKLSAVAASIV 70
S+ +++ D P+ LP PEE E L+ V+ S V
Sbjct: 939 SQEAELLLPKDAPLELPREPEETEEPLATVSGSPV 973
>BC041564-1|AAH41564.1| 284|Homo sapiens paired-like (aristaless)
homeobox 2a protein.
Length = 284
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 17 GPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEK 61
GPP P +NC++G R H S P + P LHEK
Sbjct: 46 GPPCPALGSSNCALGAL---RDHQPAPYSAVPYKFFPEPSGLHEK 87
>AF022724-1|AAB82744.1| 284|Homo sapiens ARIX homeodomain protein
protein.
Length = 284
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 17 GPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEK 61
GPP P +NC++G R H S P P LHEK
Sbjct: 46 GPPCPALGSSNCALGAL---RDHQPAPYSAVPYNFFPEPSGLHEK 87
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.132 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,069,093
Number of Sequences: 224733
Number of extensions: 515544
Number of successful extensions: 1306
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1298
Number of HSP's gapped (non-prelim): 15
length of query: 71
length of database: 73,234,838
effective HSP length: 50
effective length of query: 21
effective length of database: 61,998,188
effective search space: 1301961948
effective search space used: 1301961948
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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