Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000636-TA|BGIBMGA000636-PA|undefined
(71 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical pr... 31 0.13
DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isofor... 31 0.13
DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isofor... 31 0.13
U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective fasci... 29 0.30
AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormo... 29 0.30
Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical pr... 27 1.2
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 27 1.2
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 27 1.2
Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical pr... 27 2.1
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 2.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 2.1
Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical pr... 26 2.8
Z66512-8|CAA91324.2| 349|Caenorhabditis elegans Hypothetical pr... 26 3.7
U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical pr... 25 4.9
U39851-8|AAF99879.1| 937|Caenorhabditis elegans Hypothetical pr... 25 4.9
Z79756-9|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 25 8.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 25 8.6
AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical ... 25 8.6
>Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical
protein F10G8.4 protein.
Length = 395
Score = 30.7 bits (66), Expect = 0.13
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 7 YNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLP-FWPEELHEKLSAV 65
YN + +TS P Y N SV +F H I+T + ++P FW +K A+
Sbjct: 70 YNLVNLTSTQRNPL---GYINASVAEFPEIGRHYIITGAAQDTQIPFFWQMVFEQKSPAI 126
>DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isoform
protein.
Length = 405
Score = 30.7 bits (66), Expect = 0.13
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 7 YNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLP-FWPEELHEKLSAV 65
YN + +TS P Y N SV +F H I+T + ++P FW +K A+
Sbjct: 70 YNLVNLTSTQRNPL---GYINASVAEFPEIGRHYIITGAAQDTQIPFFWQMVFEQKSPAI 126
>DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isoform
protein.
Length = 388
Score = 30.7 bits (66), Expect = 0.13
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 7 YNPIGVTSIDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLP-FWPEELHEKLSAV 65
YN + +TS P Y N SV +F H I+T + ++P FW +K A+
Sbjct: 70 YNLVNLTSTQRNPL---GYINASVAEFPEIGRHYIITGAAQDTQIPFFWQMVFEQKSPAI 126
>U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective
fasciculation of axonsprotein 1 protein.
Length = 419
Score = 29.5 bits (63), Expect = 0.30
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 4 VNSYNPIGVTSIDGPPSPGPAYANCSV-GDFSPSRHHDIV 42
VNS+ +G D PP+ C+V GD S +H+ I+
Sbjct: 78 VNSFPSMGSVKTDSPPTASSPTLCCAVCGDVSSGKHYGIL 117
>AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormone
receptor FAX-1 protein.
Length = 419
Score = 29.5 bits (63), Expect = 0.30
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 4 VNSYNPIGVTSIDGPPSPGPAYANCSV-GDFSPSRHHDIV 42
VNS+ +G D PP+ C+V GD S +H+ I+
Sbjct: 78 VNSFPSMGSVKTDSPPTASSPTLCCAVCGDVSSGKHYGIL 117
>Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical
protein C09G1.4 protein.
Length = 546
Score = 27.5 bits (58), Expect = 1.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 DGPPSPGPAYANCSVGDF-SPSRHHDIVTSSDTPVRLPFWPEE 57
D PP Y + S D+ +P+ I + S TP RLP P++
Sbjct: 78 DLPPGAYQNYRSHSSADYLTPNSARKIASYSTTPRRLPLQPQQ 120
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 27.5 bits (58), Expect = 1.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 33 FSPSRHHDIVTSSDTPVRLPFW 54
FSPS+ H+++ S D R+ W
Sbjct: 83 FSPSKEHELLASGDCEGRITIW 104
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 27.5 bits (58), Expect = 1.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 33 FSPSRHHDIVTSSDTPVRLPFW 54
FSPS+ H+++ S D R+ W
Sbjct: 85 FSPSKEHELLASGDCEGRITIW 106
>Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical
protein W09G3.2 protein.
Length = 428
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 15 IDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELH 59
+ PPSP PA ++G + R+ DI++ R+P+ EEL+
Sbjct: 10 VPSPPSPHPA--GTTIGGPNSKRYSDILSLDYCTFRIPY--EELN 50
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 26.6 bits (56), Expect = 2.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 6 SYNPIGVTS-IDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEE 57
S +P+ +D P SP P+ S S HH + T++ T V F EE
Sbjct: 2532 SVSPVDAQEQVDVPHSPAPSSHAESEQPVPESPHHIVETTTTTTVTREFQDEE 2584
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 26.6 bits (56), Expect = 2.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 6 SYNPIGVTS-IDGPPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEE 57
S +P+ +D P SP P+ S S HH + T++ T V F EE
Sbjct: 2532 SVSPVDAQEQVDVPHSPAPSSHAESEQPVPESPHHIVETTTTTTVTREFQDEE 2584
>Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical
protein ZK637.3 protein.
Length = 599
Score = 26.2 bits (55), Expect = 2.8
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 19 PSPGPAYANCSVGDFSPSRHHDIVTS---SDTPV-RLPFWPEELHEK 61
PS + CSVGDF+ D++ S DT + W E+ ++
Sbjct: 82 PSLNADFVECSVGDFNGDSRLDVLVSIRDKDTEIYNHTLWTSEIEDE 128
>Z66512-8|CAA91324.2| 349|Caenorhabditis elegans Hypothetical
protein F52H3.4 protein.
Length = 349
Score = 25.8 bits (54), Expect = 3.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 29 SVGDFSPSRHHDIVTSSDTPV 49
SV DF+ HH +V +D P+
Sbjct: 207 SVSDFADQLHHPMVNGADLPI 227
>U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical
protein K02E10.7 protein.
Length = 684
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 30 VGDFSPSRHHDIVTSSDTPVR-LPFWPEELHEKLSAVAA 67
+ D S+ + + S TP+ LPF ELH +LS V +
Sbjct: 187 ISDIESSQFLNWLPFSQTPLHILPFIAPELHNQLSEVTS 225
>U39851-8|AAF99879.1| 937|Caenorhabditis elegans Hypothetical
protein C23G10.8 protein.
Length = 937
Score = 25.4 bits (53), Expect = 4.9
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 14 SIDGPPSPGPA-YANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEELHEKLSA 64
S DGPP P P Y F D + P + W LHE + +
Sbjct: 453 SADGPPLPSPVHYVATQAAKFLSMNQEDTEYILEGPSSIQCW-SRLHEVIES 503
>Z79756-9|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 24.6 bits (51), Expect = 8.6
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 18 PPSPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLP 52
P SP P + + S HHD T+ T P
Sbjct: 9 PSSPAPGHGSSGYFSQQESTHHDERTTPPTAFHFP 43
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 20 SPGPAYANCSVGDFSPSRHHDIVTSSDTPVRLPFWPEEL 58
S GPA + S G F +H +S+ P+ +P E +
Sbjct: 619 SVGPAVSAPSGGHFDRRQHGQSNMASERPIEIPSQSESI 657
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 9 PIGVTSIDGPPSPGPAYANC 28
P G DG P P AY C
Sbjct: 281 PAGAPGTDGAPGPDAAYCPC 300
>AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical
protein Y69A2AR.16 protein.
Length = 929
Score = 24.6 bits (51), Expect = 8.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 43 TSSDTPVRLPFWPEELHEKLSAVAASIV 70
++ D RLP W E+ H + +A SIV
Sbjct: 318 STGDMSRRLPMWQEDQHWLMLILANSIV 345
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.132 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,069,358
Number of Sequences: 27539
Number of extensions: 81967
Number of successful extensions: 138
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 124
Number of HSP's gapped (non-prelim): 20
length of query: 71
length of database: 12,573,161
effective HSP length: 51
effective length of query: 20
effective length of database: 11,168,672
effective search space: 223373440
effective search space used: 223373440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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