Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000635-TA|BGIBMGA000635-PA|IPR001766|Fork head
transcription factor
(178 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 2e-42
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 5e-32
SB_13048| Best HMM Match : Fork_head (HMM E-Value=0) 131 4e-31
SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 8e-31
SB_34638| Best HMM Match : Fork_head (HMM E-Value=0) 129 1e-30
SB_47058| Best HMM Match : Fork_head (HMM E-Value=0) 129 1e-30
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 7e-29
SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 7e-25
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 108 2e-24
SB_5331| Best HMM Match : Fork_head (HMM E-Value=0) 108 3e-24
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 108 3e-24
SB_53442| Best HMM Match : Fork_head (HMM E-Value=0) 103 1e-22
SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_10836| Best HMM Match : Fork_head (HMM E-Value=0) 95 4e-20
SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39) 94 5e-20
SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 4e-19
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 8e-18
SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30) 84 5e-17
SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 75 3e-14
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21) 62 3e-10
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05) 45 4e-05
SB_51004| Best HMM Match : Fork_head (HMM E-Value=3) 42 3e-04
SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06) 38 0.005
SB_58766| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_28299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_58714| Best HMM Match : Linker_histone (HMM E-Value=5.7e-15) 27 8.7
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_46521| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 168 bits (409), Expect = 2e-42
Identities = 74/104 (71%), Positives = 84/104 (80%)
Query: 11 IKAQTTSSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQ 70
IKA+ ++ KPPYSYVALI MAI+ S KR TL+ IY YI +FP++EKNKKGWQ
Sbjct: 30 IKAEGKDTSKDPNVKPPYSYVALIAMAIRESPEKRLTLNGIYQYIISKFPYYEKNKKGWQ 89
Query: 71 NSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
NSIRHNLSLNECFIKVPREGGGERKGNYWTLDP C +MFE GN+
Sbjct: 90 NSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY 133
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 134 bits (323), Expect = 5e-32
Identities = 57/94 (60%), Positives = 72/94 (76%)
Query: 21 QALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLN 80
Q + KPPYSY+ALI MAIQ++ KR TLS IY++I FP++ NK+GWQNSIRHNLSLN
Sbjct: 54 QDMVKPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYYRNNKQGWQNSIRHNLSLN 113
Query: 81 ECFIKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
ECF+KVPR+ KG++W LDP MFENG++
Sbjct: 114 ECFVKVPRDDKKPGKGSFWMLDPDSLNMFENGSY 147
>SB_13048| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 311
Score = 131 bits (316), Expect = 4e-31
Identities = 56/93 (60%), Positives = 71/93 (76%)
Query: 22 ALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNE 81
AL+KPPYSY+ALITMAI S ++ TLS+I +I + FP++ + WQNSIRHNLSLN+
Sbjct: 61 ALSKPPYSYIALITMAILQSPQRKLTLSDICEFIKRRFPYYREKFPSWQNSIRHNLSLND 120
Query: 82 CFIKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
CF+K+PRE G KGNYWTLDP MF+NG+F
Sbjct: 121 CFVKMPREPGNPGKGNYWTLDPASEGMFDNGSF 153
>SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 130 bits (313), Expect = 8e-31
Identities = 55/88 (62%), Positives = 67/88 (76%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECFI 84
KPPYSY++LITMAIQ S K TLSEIY +I FP++ +N++ WQNSIRH+LS N+CF+
Sbjct: 39 KPPYSYISLITMAIQQSPNKMLTLSEIYQFIMDLFPYYRQNQQRWQNSIRHSLSFNDCFV 98
Query: 85 KVPREGGGERKGNYWTLDPQCGEMFENG 112
KVPR KG+YWTL P CG MFENG
Sbjct: 99 KVPRSPDRPGKGSYWTLHPDCGNMFENG 126
>SB_34638| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 129 bits (312), Expect = 1e-30
Identities = 56/91 (61%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECFI 84
KPP+SY+ALITM+I+ S + TL+EIY +I FP+F KN++ WQNSIRHNLSLN+CF+
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 85 KVPRE-GGGERKGNYWTLDPQCGEMFENGNF 114
KVPR G KGNYWTL P CG+MF +G+F
Sbjct: 152 KVPRSIFGKPGKGNYWTLHPSCGDMFGSGSF 182
>SB_47058| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 129 bits (312), Expect = 1e-30
Identities = 56/91 (61%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECFI 84
KPP+SY+ALITM+I+ S + TL+EIY +I FP+F KN++ WQNSIRHNLSLN+CF+
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 85 KVPRE-GGGERKGNYWTLDPQCGEMFENGNF 114
KVPR G KGNYWTL P CG+MF +G+F
Sbjct: 152 KVPRSIFGKPGKGNYWTLHPSCGDMFGSGSF 182
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 128 bits (308), Expect = 3e-30
Identities = 56/105 (53%), Positives = 76/105 (72%)
Query: 10 EIKAQTTSSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGW 69
E+ + S Q+ KPPYSY+ALI MAI +S ++ TLSEIY +I++ FPF++ W
Sbjct: 28 EVGDKKQSRRQQSRGKPPYSYIALICMAITSSPQRQLTLSEIYDFISQRFPFYQTCSIKW 87
Query: 70 QNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
+NSIRHNL+LN+CFIK+PRE KGNYWT+DP +MF+NG+F
Sbjct: 88 KNSIRHNLTLNDCFIKLPREPNRPGKGNYWTIDPTSVDMFDNGSF 132
>SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 123 bits (297), Expect = 7e-29
Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFE-KNKKGWQNSIRHNLSLNECF 83
KPPYSYVALI+MAI+ S ++ TL+ IY +IT FP++ +NK+GWQNSIRHNLSLN CF
Sbjct: 61 KPPYSYVALISMAIKQSPGRKITLNGIYHFITSAFPYYTWQNKRGWQNSIRHNLSLNRCF 120
Query: 84 IKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
+KV RE KG YWTLDP EMFE+G +
Sbjct: 121 VKVHREKADPGKGCYWTLDPAYEEMFEDGKY 151
>SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 110 bits (264), Expect = 7e-25
Identities = 49/90 (54%), Positives = 61/90 (67%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECFI 84
+PPYSY+ALI MA+QNS KR TL I +I FPF+ + W+ IR+NLSLN+CFI
Sbjct: 109 RPPYSYIALIAMAVQNSPEKRLTLDGICKFIRDRFPFYRETYPSWKICIRNNLSLNDCFI 168
Query: 85 KVPREGGGERKGNYWTLDPQCGEMFENGNF 114
K + KGNYWTLDP+ MFENG+F
Sbjct: 169 KTGIKSDEPLKGNYWTLDPESYNMFENGSF 198
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 108 bits (260), Expect = 2e-24
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 9 SEIKAQTTSSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKG 68
S + + T + A KP +SY+ALI MAI ++ +K+ L +IY YI+ FP++ K
Sbjct: 66 SHLVKKETIVDDDADVKPAHSYIALIAMAILSNSSKKMILGDIYQYISDNFPYYRNKDKS 125
Query: 69 WQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
W+NSIRHNLSLNECFIK R G KGNYW + P E F NG+F
Sbjct: 126 WRNSIRHNLSLNECFIKAGRSENG--KGNYWAIHPANLEDFANGDF 169
>SB_5331| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 503
Score = 108 bits (259), Expect = 3e-24
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 4 SSPGNSEIKAQTTSSNSQALT-KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFF 62
SS G+S +++S ++ KPPYSY LI AI ++ K+ TLS IYA+ITK +P++
Sbjct: 94 SSAGSSVSGDKSSSEGGKSEDGKPPYSYAQLIVQAILSATDKQLTLSGIYAHITKNYPYY 153
Query: 63 EKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQC 105
KGWQNSIRHNLSLN F+KVPR KG++W +DP C
Sbjct: 154 RTADKGWQNSIRHNLSLNRYFVKVPRAQDEPGKGSFWRIDPSC 196
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 108 bits (259), Expect = 3e-24
Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 3 PSSPGN-SEIKAQTTSSNSQAL-TKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFP 60
P SP + S + +T + Q +KPPYSY LIT AI +S K+ TLSEIY +I FP
Sbjct: 49 PGSPLDPSAVLDETEARQHQTKESKPPYSYANLITFAINSSPEKKMTLSEIYQWICDHFP 108
Query: 61 FFEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLD 102
++++ GW+NSIRHNLSLN+CFIKVPR KG+YW +D
Sbjct: 109 YYKEAGNGWKNSIRHNLSLNKCFIKVPRSKDDPGKGSYWAID 150
>SB_53442| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 407
Score = 103 bits (246), Expect = 1e-22
Identities = 45/90 (50%), Positives = 61/90 (67%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECFI 84
KPPYSY LI MA+++++ + TLS IY +I + F F+ WQNSIRHNLSLN+CF+
Sbjct: 98 KPPYSYATLICMAMRDTKRVKITLSAIYKWIKENFMFYRVADPTWQNSIRHNLSLNKCFV 157
Query: 85 KVPREGGGERKGNYWTLDPQCGEMFENGNF 114
KVPR+ KG +W +DP +MF +G F
Sbjct: 158 KVPRKKDEPGKGGFWRIDPAYADMFVDGVF 187
>SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECFI 84
KP SY+ LI AI + K+ LS+IY YI +P+F GW+NSIRHNLSLNECF+
Sbjct: 99 KPSQSYIGLIGKAIMSVPQKKLVLSDIYNYILTHYPYFRNKGAGWRNSIRHNLSLNECFV 158
Query: 85 KVPREGGGERKGNYWTLDPQCGEMFENGNF 114
KV R G KG++W ++P+ E F G +
Sbjct: 159 KVGRSSNG--KGHFWAINPENYEDFSKGEY 186
>SB_10836| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 458
Score = 94.7 bits (225), Expect = 4e-20
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 17 SSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHN 76
S ++ +KPPYS+ +LI MAI+ S KR + +IY +I FP+F + GW+NS+RHN
Sbjct: 114 SGKRKSPSKPPYSFSSLIFMAIEESPNKRLPVKDIYNWIMDHFPYFRDARLGWKNSVRHN 173
Query: 77 LSLNECFIKVPRE-GGGERKGNYWTLDP 103
LSLN+CF KV ++ G KG+ WT+DP
Sbjct: 174 LSLNKCFKKVDKDKGQNVGKGSLWTVDP 201
>SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39)
Length = 554
Score = 94.3 bits (224), Expect = 5e-20
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 3 PSSPGNSEIKAQTTSSNSQALTK-----PPYSYVALITMAIQNSQTKRATLSEIYAYITK 57
P + + I + S SQ L K PP+SY+ALI AI NS KR TL+EI Y+ K
Sbjct: 106 PCAVARNTIMMMSMSGGSQCLEKAERMKPPHSYIALIATAILNSPEKRLTLTEINEYLVK 165
Query: 58 EFPFFEKNKKGWQNSIRHNLSLNECFIKVPREGGGE-RKGNYWT 100
+ FF + +GW+NS+RHNLS N+CF+K+ R+ K NYWT
Sbjct: 166 HYVFFRGSYQGWKNSVRHNLSFNKCFVKILRDPARPWGKDNYWT 209
>SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 29 SYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNK-KGWQNSIRHNLSLNECFIKVP 87
++VA+I +I + TKR TLS IY++I K +P F+K K GW+NS+RHNLS N+CF+K
Sbjct: 129 TFVAVIAQSILSVPTKRMTLSSIYSFIAKNYPHFDKEKGPGWRNSVRHNLSSNDCFVKAS 188
Query: 88 REGGGERKGNYWTLDPQCGEMFENGNF 114
R G KG+YW + P+ F GNF
Sbjct: 189 RAENG--KGHYWMIHPKDLPEFSKGNF 213
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECFI 84
KP SY++LI+ AI +S ++ LS+IY +I +P+F GW+NSIRHNLSLNECF+
Sbjct: 80 KPNQSYISLISEAILSSPEQKLILSDIYNFILTRYPYFRTKGTGWRNSIRHNLSLNECFV 139
Query: 85 KVPREGGGERKGNYWTLDPQCGEMFENGNF 114
K R G KG++W +D + F G+F
Sbjct: 140 KAGRSPNG--KGHFWAIDATYFDDFRRGDF 167
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 87.0 bits (206), Expect = 8e-18
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 8 NSEIKAQTTSSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKK 67
N+ K+Q + SQ KP SYVALI+ AI S KR TLSEIY I +FP+F +
Sbjct: 4 NTIPKSQYRTGKSQR--KPSTSYVALISTAILESAEKRLTLSEIYDAIELKFPWFTATRM 61
Query: 68 GWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
GW+N++RHNLSL+ECF+K G K YW + + F G +
Sbjct: 62 GWKNTVRHNLSLHECFVKGELSSNG--KSCYWRVHERFEGRFRRGEY 106
>SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30)
Length = 289
Score = 84.2 bits (199), Expect = 5e-17
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 59 FPFFEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQCGEMFENGNF 114
FPF+ N + WQNS+RHNLS N+CF+K+PR KG+ W L P CG MFENG+F
Sbjct: 4 FPFYRDNTQRWQNSLRHNLSFNDCFVKIPRRPDQPGKGSLWALHPDCGTMFENGSF 59
>SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 47 TLSEIYAYITKEFPFFEKNK-KGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQC 105
TLS IY++I K +P F+K K GW+NS+RHNLS N+CF+K R G KG+YW + P+
Sbjct: 2 TLSCIYSFIAKTYPHFDKEKGPGWRNSVRHNLSSNDCFVKASRAENG--KGHYWMIHPKD 59
Query: 106 GEMFENGNF 114
F GNF
Sbjct: 60 LPEFSKGNF 68
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 74.9 bits (176), Expect = 3e-14
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 4 SSPGNSEIKAQTTSSNSQ-ALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFF 62
S P + Q ++ Q A +PP++Y +LI AI +S + TL+EIY++ T+ F +F
Sbjct: 386 SDPDGISLDIQRSADFYQKADVRPPFTYASLIRQAILDSPDTQLTLNEIYSWFTRTFAYF 445
Query: 63 EKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPQ 104
+N W+N++RHNLSL++CF++ +E KG W +D +
Sbjct: 446 RRNAATWKNAVRHNLSLHKCFVR--KE---NVKGAVWMVDEE 482
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 28 YSYVALITMAIQNSQTKRATLSEIYAYITKEFPFF-----EKNKKGWQNSIRHNLSLNEC 82
YSY LIT AIQ+S KR TLS+IY ++ P+F + GW+NSIRHNLSL+
Sbjct: 67 YSYADLITQAIQSSPEKRLTLSQIYDWMVNSVPYFRDKGDSNSSAGWKNSIRHNLSLHSK 126
Query: 83 FIKVPREGGGE 93
F++V EG G+
Sbjct: 127 FVRVQNEGNGK 137
>SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21)
Length = 491
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 15/81 (18%)
Query: 24 TKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKGWQNSIRHNLSLNECF 83
T+PPYSY LI +AI +++ KR TL EIY +I + FP++ K KK W+
Sbjct: 59 TRPPYSYATLILLAINSTEEKRMTLQEIYKWIEERFPYYTKCKKAWKE------------ 106
Query: 84 IKVPREGGGERKGNYWTLDPQ 104
K P + G KG+YW++ P+
Sbjct: 107 -KRPADLPG--KGSYWSISPE 124
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 29 SYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNK-----KGWQNSIRHNLSLNECF 83
SY LI AI S+ ++ TL +IY + P+F+ + KGW+N+IRH LSL + F
Sbjct: 750 SYSDLIARAIDQSKFQKLTLPQIYDWFVINVPYFKAKEHLPSTKGWKNAIRHTLSLRQRF 809
Query: 84 IKVPREGGGERKGNYWTL 101
+++P G R ++WT+
Sbjct: 810 VRLPDPGNPYR--SWWTV 825
>SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 24 TKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNK--KGWQNSIRHNLSLNE 81
+K SY L+ AI +S KR TL EIY + + W+N+IRH LS +
Sbjct: 446 SKGTVSYSDLLAEAISSSPDKRLTLQEIYMWFEDNVAGISPSSVTHDWKNTIRHTLSRRK 505
Query: 82 CFIKVPREGGGERKGNYWTLDPQCGEM 108
F+++ ++ ++WT++P E+
Sbjct: 506 RFLRIAM--SEKKNKSWWTVNPAFSEI 530
>SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 66 KKGWQNSIRHNLSLNECFIKVPR-EGGGERKGNYWTLDPQ 104
+K NS+RHNLSLN+ F K+ R +G +RKG W+L P+
Sbjct: 294 EKNLLNSVRHNLSLNKAFCKLERPQGASQRKGCLWSLKPE 333
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 11 IKAQTTSSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYI 55
I + N + KP +SY LI MA++NS + +SEIY ++
Sbjct: 156 ISKENAKPNEKCYPKPLFSYSCLIAMALKNSDSGTLPVSEIYKFM 200
>SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05)
Length = 156
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 4 SSPGNSEIKAQTTSSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITK 57
S+ E K + + KP +SY ALI MAI+ S+ KR TLS IY YI K
Sbjct: 40 SAEERKERKEKAGKDEQKNTEKPAFSYNALIMMAIRGSEEKRLTLSGIYEYIMK 93
>SB_51004| Best HMM Match : Fork_head (HMM E-Value=3)
Length = 136
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/27 (66%), Positives = 21/27 (77%)
Query: 25 KPPYSYVALITMAIQNSQTKRATLSEI 51
+PPYSY+ALI MA+QNS KR TL I
Sbjct: 109 RPPYSYIALIAMAVQNSPEKRLTLDGI 135
>SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06)
Length = 246
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 15 TTSSNSQALTKPPY---SYVALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNK----- 66
TT + + K P+ SY LI AI S ++ TL +IY + + +F +
Sbjct: 119 TTYDDQEKEKKKPWGNASYSDLIARAITQSTKQKLTLPQIYEWFVENVSYFRDREHLPST 178
Query: 67 KGW----------QNSIRHNLSLNECFIK 85
KGW QN+IRH LSL + F++
Sbjct: 179 KGWKLIRIPCAIIQNAIRHTLSLRQRFVR 207
>SB_58766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 71 NSIRHNLSLNECFIKVPREGGGERKGNYWTLDP 103
N++RH LS+ + F++V G + ++WT+ P
Sbjct: 1 NTVRHTLSMRKRFVRVAMTSKGNK--SWWTVKP 31
>SB_28299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 87 PREGGGERKGNYWTLDPQCGEMFENGNFXXXXXXXXXXXANPYSKALF 134
P+EGGG+++G CG + + NPY KA F
Sbjct: 126 PKEGGGDKEGG------SCGGSLYSRTYQTRYSRTSQKTGNPYKKAAF 167
>SB_58714| Best HMM Match : Linker_histone (HMM E-Value=5.7e-15)
Length = 169
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 30 YVALITMAIQNSQTKRATLSEIYAYITKEFPFFE 63
YV +I+ A++N K A+ I YI KEF E
Sbjct: 13 YVDMISSAVKNLGGKGASRQAINKYIVKEFNLTE 46
>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 32 ALITMAIQNSQTKRATLSEIYAYITKEFPFFEKNKKG 68
AL+ QN+QT ++ L E +A I + F KN+ G
Sbjct: 129 ALVQSYEQNNQTIQSKLQEFFAVIERIGLFTRKNRTG 165
>SB_46521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 15 TTSSNSQALTKPPYSYVALITMAIQNSQTKRATLSEIYAYITKEFP 60
T S+ ++ LTKPPY L+ NS + + +AY T++ P
Sbjct: 5 TFSAKNRHLTKPPYISRTLLPKH-DNSLLAQQENEDAFAYETRDLP 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.131 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,539,993
Number of Sequences: 59808
Number of extensions: 192941
Number of successful extensions: 419
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 373
Number of HSP's gapped (non-prelim): 37
length of query: 178
length of database: 16,821,457
effective HSP length: 78
effective length of query: 100
effective length of database: 12,156,433
effective search space: 1215643300
effective search space used: 1215643300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
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