GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000635-TA|BGIBMGA000635-PA|IPR001766|Fork head
transcription factor
         (178 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    39   1e-04
AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    23   7.1  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            22   9.4  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 38.7 bits (86), Expect = 1e-04
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 7/70 (10%)

Query: 8   NSEIKAQTTSSNSQALTKPP-----YSYVALITMAIQNSQTKRATLSEIYAYITKEFPFF 62
           N++++A  +SS+S+  +         SY  LIT AI ++   R TLS+IY ++ +  P+F
Sbjct: 94  NTQLQAAASSSSSKKNSSRRNAWGNLSYADLITQAISSASDSRLTLSQIYEWMVQNVPYF 153

Query: 63  EKNKKGWQNS 72
           +   KG  NS
Sbjct: 154 K--DKGDSNS 161


>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
          protein AgamOBP27 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)

Query: 62 FEKNKKGWQNSIRHNLSLNECFIK 85
          FE  + G   S+R++L   ECF+K
Sbjct: 30 FESLRAG-NFSVRNSLCFGECFVK 52


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 11   IKAQTTSSNSQALTKPPYSYVALITMA 37
            IK Q T +   ALT PP   ++  T A
Sbjct: 1076 IKPQVTPATPPALTTPPTEPISSATPA 1102


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.131    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,834
Number of Sequences: 2123
Number of extensions: 6216
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 178
length of database: 516,269
effective HSP length: 60
effective length of query: 118
effective length of database: 388,889
effective search space: 45888902
effective search space used: 45888902
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 45 (22.2 bits)