GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000635-TA|BGIBMGA000635-PA|IPR001766|Fork head
transcription factor
         (178 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   5.2  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   5.2  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    21   9.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
          protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 5/11 (45%), Positives = 10/11 (90%)

Query: 81 ECFIKVPREGG 91
          +CF+++P+E G
Sbjct: 58 DCFVRIPKEQG 68


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
          protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 5/11 (45%), Positives = 10/11 (90%)

Query: 81 ECFIKVPREGG 91
          +CF+++P+E G
Sbjct: 58 DCFVRIPKEQG 68


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 138 YHVSHVAQHVPPHM 151
           YHV+ +  H+ P+M
Sbjct: 5   YHVAQLPHHLSPNM 18


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.131    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,304
Number of Sequences: 429
Number of extensions: 2046
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 178
length of database: 140,377
effective HSP length: 54
effective length of query: 124
effective length of database: 117,211
effective search space: 14534164
effective search space used: 14534164
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)