Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000634-TA|BGIBMGA000634-PA|undefined
         (104 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   4.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    20   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   7.2  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
          protein protein.
          Length = 166

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 26 PEFKTGIEELLRNDFRKVVSRGTDGGGLDGVCNNEVPRLT 65
          P     ++ L+R+    ++S   D    +   N++ PR+T
Sbjct: 56 PGLAAVLQYLIRSGQLNIISSDHDDSDEEYAANSQPPRIT 95


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 6   VDVNDAIEDAYTVAFKAAGFP 26
           ++VN  +  +  +A KA G+P
Sbjct: 124 IEVNARLSRSSALASKATGYP 144


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 63  RLTPGLHPESFFDMNELP 80
           R+T G+ P+S F+    P
Sbjct: 538 RMTAGIDPKSIFNSGYRP 555


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.139    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,507
Number of Sequences: 429
Number of extensions: 1347
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 104
length of database: 140,377
effective HSP length: 49
effective length of query: 55
effective length of database: 119,356
effective search space:  6564580
effective search space used:  6564580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)