Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000634-TA|BGIBMGA000634-PA|undefined
(104 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g07550.1 68414.m00808 leucine-rich repeat protein kinase, put... 27 2.4
At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative ... 27 3.1
At2g17033.2 68415.m01965 pentatricopeptide (PPR) repeat-containi... 27 3.1
At2g17033.1 68415.m01964 pentatricopeptide (PPR) repeat-containi... 27 3.1
At1g73870.1 68414.m08554 zinc finger (B-box type) family protein 27 3.1
At1g30270.1 68414.m03702 CBL-interacting protein kinase 23 (CIPK... 26 4.2
At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative simila... 26 5.5
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin... 25 7.3
At2g45400.1 68415.m05646 dihydroflavonol 4-reductase family / di... 25 7.3
At1g20380.1 68414.m02542 prolyl oligopeptidase, putative / proly... 25 7.3
At5g11020.1 68418.m01287 protein kinase family protein contains ... 25 9.6
At4g09990.1 68417.m01635 expressed protein contains Pfam profile... 25 9.6
At3g20780.1 68416.m02628 topoisomerase 6 subunit B (TOP6B) nearl... 25 9.6
At3g15030.2 68416.m01902 TCP family transcription factor, putati... 25 9.6
At3g15030.1 68416.m01901 TCP family transcription factor, putati... 25 9.6
At3g13510.1 68416.m01699 expressed protein Pfam profile PF03080... 25 9.6
At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / proly... 25 9.6
>At1g07550.1 68414.m00808 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 864
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 22 AAGFPEFKTGIEELLRNDFRKVVS 45
A G+ EFKT +E LLR K+VS
Sbjct: 594 AQGYKEFKTEVELLLRVHHEKLVS 617
>At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative
similar to GT-2 factor [Arabidopsis thaliana GI:416490
Length = 619
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 72 SFFDMNELPTNAYSLDTRRMQLYSHQHIH 100
S F+ N P + SLD+R++ + H H H
Sbjct: 41 SSFNTNHQPQHMLSLDSRKIIHHHHHHHH 69
>At2g17033.2 68415.m01965 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 505
Score = 26.6 bits (56), Expect = 3.1
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 5 PVDVNDAIEDAYTVAFKAAGFPEFKT---GIEEL-LRNDFRKVVSR-GTDGGGLDGVCNN 59
P D IE+ K F E+K+ G L L +D +VV R GT+G +D VC+N
Sbjct: 260 PHDAERVIEEMRMEKIKPGLF-EYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSN 318
Query: 60 EV 61
V
Sbjct: 319 MV 320
>At2g17033.1 68415.m01964 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 504
Score = 26.6 bits (56), Expect = 3.1
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 5 PVDVNDAIEDAYTVAFKAAGFPEFKT---GIEEL-LRNDFRKVVSR-GTDGGGLDGVCNN 59
P D IE+ K F E+K+ G L L +D +VV R GT+G +D VC+N
Sbjct: 259 PHDAERVIEEMRMEKIKPGLF-EYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSN 317
Query: 60 EV 61
V
Sbjct: 318 MV 319
>At1g73870.1 68414.m08554 zinc finger (B-box type) family protein
Length = 392
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 26 PEFKTGIEELLRNDFRKVVSRGTDGGGLDG 55
P G E+L+ +D +G DGGG DG
Sbjct: 314 PHVVGGYEKLMSSDGSVTRQQGRDGGGSDG 343
>At1g30270.1 68414.m03702 CBL-interacting protein kinase 23 (CIPK23)
identical to CBL-interacting protein kinase 23
[Arabidopsis thaliana] gi|14486386|gb|AAK61494
Length = 482
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 25 FPEFKTGIEELLRNDFRKVVSRGTDGGGLDGVCNN 59
+ TG+++++ + GTDGGG +G N
Sbjct: 440 YKNLTTGLKDIVWKTIDEEKEEGTDGGGTNGAMAN 474
>At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative similar
to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family
Length = 491
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 9 NDAIEDAYTVAFKAAGFPEFKTG-IEELLRNDFRKVVSRGTDGGGLDGVCNNEVPR 63
N A+ + + + + +FK+G + LL D V SRG D +D V N ++PR
Sbjct: 329 NIAMHSLNSQSMRLSALSKFKSGKVPILLATD---VASRGLDIPTVDLVINYDIPR 381
>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
protein contains Pfam heavy metal associated domain
PF00403
Length = 473
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 38 NDFRKVVSRGTDGGGLDGVCNNEVPRLTPGLHPESFFDMNEL 79
N+ +K G GGG G N+ P++ L+P+ + +L
Sbjct: 111 NNNKKGQKNGGGGGGGGGGGNSNAPKMGQQLNPQHLQQLQQL 152
>At2g45400.1 68415.m05646 dihydroflavonol 4-reductase family /
dihydrokaempferol 4-reductase family similar to
dihydroflavonol 4-reductase (SP:P51102), vestitone
reductase (Medicago sativa, GI:973249)
Length = 364
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 21 KAAGFPEFKTGIEELLRNDFRKVVSRG 47
K+AGF EFK G EE+ R +RG
Sbjct: 337 KSAGF-EFKYGAEEIFSGAIRSCQARG 362
>At1g20380.1 68414.m02542 prolyl oligopeptidase, putative / prolyl
endopeptidase, putative / post-proline cleaving enzyme,
putative similar to SP|P48147 Prolyl endopeptidase (EC
3.4.21.26) (Post-proline cleaving enzyme) {Homo
sapiens}; contains Pfam profiles PF00326: prolyl
oligopeptidase family, PF02897: Prolyl oligopeptidase,
N-terminal beta-propeller domain
Length = 731
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 18 VAFKAAGFPEFKTGIEELLRNDF---RKV-VSRGTDGGGLDGVCNNEVPRL 64
+A K F +F +G E L+ + RK+ + G++GG L G C N+ P L
Sbjct: 534 LANKQNCFDDFISGAEYLVSAGYTQPRKLCIEGGSNGGILVGACINQRPDL 584
>At5g11020.1 68418.m01287 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 372
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 85 SLDTRRMQLYSHQHIHPAI 103
+LD R Y H+H HPAI
Sbjct: 183 ALDVTRGLEYLHEHCHPAI 201
>At4g09990.1 68417.m01635 expressed protein contains Pfam profile
PF04669: Protein of unknown function (DUF579)
Length = 290
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 7 DVNDAIEDAYTVAFKAAGFPEFKTG 31
D+N +ED ++VAF G+ + + G
Sbjct: 239 DINRPVEDEFSVAFLCGGYMKEQQG 263
>At3g20780.1 68416.m02628 topoisomerase 6 subunit B (TOP6B) nearly
identical to topoisomerase 6 subunit B [Arabidopsis
thaliana] GI:12331188
Length = 670
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 8 VNDAIEDAYTVAFKAAGFPEFKTGIEELLRNDFRKVV 44
V + +E+A A + PE + IEE++++ F ++
Sbjct: 54 VRELVENALDSAESISELPEVEVTIEEIVKSKFNSMI 90
>At3g15030.2 68416.m01902 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 25.0 bits (52), Expect = 9.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 47 GTDGGGLDGVCNNEVPRLTPGLHPE-------SFFDMNELPTNAYSLDTRRMQLYSHQH 98
G +GGG + NNE L P + + SFF + T A S + M Y HQH
Sbjct: 154 GFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPS-NHNLMHNYHHQH 211
>At3g15030.1 68416.m01901 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 25.0 bits (52), Expect = 9.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 47 GTDGGGLDGVCNNEVPRLTPGLHPE-------SFFDMNELPTNAYSLDTRRMQLYSHQH 98
G +GGG + NNE L P + + SFF + T A S + M Y HQH
Sbjct: 154 GFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPS-NHNLMHNYHHQH 211
>At3g13510.1 68416.m01699 expressed protein Pfam profile PF03080:
Arabidopsis proteins of unknown function
Length = 419
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 63 RLTPGLHPESFFDMNELPTNAYSLDTRRMQLY 94
++ P HPE FD N++ +T QL+
Sbjct: 86 QMRPSYHPEGLFDDNKVSAEPKGKETHIPQLW 117
>At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / prolyl
endopeptidase, putative / post-proline cleaving enzyme,
putative similar to SP|Q9QUR6 Prolyl endopeptidase (EC
3.4.21.26) (Post-proline cleaving enzyme) {Mus
musculus}; contains Pfam profiles PF00326: prolyl
oligopeptidase family, PF02897: Prolyl oligopeptidase,
N-terminal beta-propeller domain
Length = 731
Score = 25.0 bits (52), Expect = 9.6
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 15 AYTVAFKAAGFPEFKTGIEELLRNDFRK----VVSRGTDGGGLDGVCNNEVPRL 64
A ++A K F +F +G E L+ + + + G++GG L G C N+ P L
Sbjct: 531 AGSLAKKQNCFDDFISGAEYLVSAGYTQPSKLCIEGGSNGGLLVGACINQRPDL 584
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.139 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,653,249
Number of Sequences: 28952
Number of extensions: 108778
Number of successful extensions: 230
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 220
Number of HSP's gapped (non-prelim): 18
length of query: 104
length of database: 12,070,560
effective HSP length: 71
effective length of query: 33
effective length of database: 10,014,968
effective search space: 330493944
effective search space used: 330493944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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