GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000634-TA|BGIBMGA000634-PA|undefined
         (104 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   1.7  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   1.7  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   3.0  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   3.0  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    22   4.0  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
          doublesex protein protein.
          Length = 265

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 48 TDGGGLDGVCNNEVPRLTP 66
          TDG G    CNN +   TP
Sbjct: 20 TDGNGASSSCNNSLNPRTP 38


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
          doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 48 TDGGGLDGVCNNEVPRLTP 66
          TDG G    CNN +   TP
Sbjct: 20 TDGNGASSSCNNSLNPRTP 38


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
          doublesex protein protein.
          Length = 241

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 48 TDGGGLDGVCNNEVPRLTP 66
          TDG G    CNN +   TP
Sbjct: 20 TDGNGAASSCNNSLNPRTP 38


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
          doublesex protein protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 48 TDGGGLDGVCNNEVPRLTP 66
          TDG G    CNN +   TP
Sbjct: 20 TDGNGAASSCNNSLNPRTP 38


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 35  LLRNDFRKVVSRGTDGGGLDGVCNNEVPRLT 65
           ++RNDF  ++ +  + G LDG    EV +L+
Sbjct: 262 IVRNDFMNLLMQLKNSGQLDG-SGEEVGKLS 291


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.139    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,584
Number of Sequences: 2123
Number of extensions: 4409
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 104
length of database: 516,269
effective HSP length: 55
effective length of query: 49
effective length of database: 399,504
effective search space: 19575696
effective search space used: 19575696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)