GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000634-TA|BGIBMGA000634-PA|undefined
         (104 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associate...    30   1.1  
AK127504-1|BAC87010.1|  862|Homo sapiens protein ( Homo sapiens ...    30   1.1  
AK124754-1|BAC85937.1|  893|Homo sapiens protein ( Homo sapiens ...    30   1.1  
BC019670-1|AAH19670.1|  383|Homo sapiens HSPC105 protein protein.      28   4.5  

>AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associated
            antigen SGA-72M protein.
          Length = 1780

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 2    RGVPVDVNDAIEDAYTVAFKAAGFPEFKTGIEELLRNDFRKVVSR-GTDGGGLDG---VC 57
            +G+P +V + + +  T+    + F EF  G+E+LL+ +     S+  +D G L     + 
Sbjct: 1030 KGLPQEVEEIVRE--TIVQPKSEFLEFSAGLEKLLKEETETFPSKYESDTGNLSPSKLIG 1087

Query: 58   NNEVP-RLTPGLHPE 71
            + E P R T   HPE
Sbjct: 1088 STEEPRRATSECHPE 1102


>AK127504-1|BAC87010.1|  862|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45597 fis, clone BRTHA3018409, weakly  similar
           to Mus musculus synaptotagmin-like 4 (Sytl4). ).
          Length = 862

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 2   RGVPVDVNDAIEDAYTVAFKAAGFPEFKTGIEELLRNDFRKVVSR-GTDGGGLDG---VC 57
           +G+P +V + + +  T+    + F EF  G+E+LL+ +     S+  +D G L     + 
Sbjct: 506 KGLPQEVEEIVRE--TIVQPKSEFLEFSAGLEKLLKEETETFPSKYESDTGNLSPSKLIG 563

Query: 58  NNEVP-RLTPGLHPE 71
           + E P R T   HPE
Sbjct: 564 STEEPRRATSECHPE 578


>AK124754-1|BAC85937.1|  893|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42764 fis, clone BRAWH3002821, moderately
           similar to Mus musculus synaptotagmin-like 2 (Sytl2). ).
          Length = 893

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 2   RGVPVDVNDAIEDAYTVAFKAAGFPEFKTGIEELLRNDFRKVVSR-GTDGGGLDG---VC 57
           +G+P +V + + +  T+    + F EF  G+E+LL+ +     S+  +D G L     + 
Sbjct: 143 KGLPQEVEEIVRE--TIVQPKSEFLEFSAGLEKLLKEETETFPSKYESDTGNLSPSKLIG 200

Query: 58  NNEVP-RLTPGLHPE 71
           + E P R T   HPE
Sbjct: 201 STEEPRRATSECHPE 215


>BC019670-1|AAH19670.1|  383|Homo sapiens HSPC105 protein protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 6/60 (10%)

Query: 7   DVNDAIEDA-YTVAFKAAGFPEFKTGIEELLRNDFRKVVSRGTDGGGLDGVC-NNEVPRL 64
           DV  A +DA  T  F  A +    +G E+L RN  ++V  RGTD   +  VC    VPRL
Sbjct: 63  DVEKAFQDADVTCVFHIASYG--MSGREQLNRNLIKEVNVRGTD--NILQVCQRRRVPRL 118


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.139    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,745,892
Number of Sequences: 224733
Number of extensions: 612543
Number of successful extensions: 1082
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 4
length of query: 104
length of database: 73,234,838
effective HSP length: 78
effective length of query: 26
effective length of database: 55,705,664
effective search space: 1448347264
effective search space used: 1448347264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)