Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000633-TA|BGIBMGA000633-PA|undefined
(113 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g04695.1 68417.m00689 calcium-dependent protein kinase, putat... 31 0.24
At4g31010.2 68417.m04403 expressed protein 27 2.9
At4g31010.1 68417.m04404 expressed protein 27 2.9
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 27 3.9
At4g04720.1 68417.m00693 calcium-dependent protein kinase, putat... 26 5.1
At2g17580.1 68415.m02034 polynucleotide adenylyltransferase fami... 26 5.1
At1g29400.2 68414.m03597 RNA recognition motif (RRM)-containing ... 26 5.1
At1g29400.1 68414.m03596 RNA recognition motif (RRM)-containing ... 26 5.1
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 26 6.8
At5g12960.1 68418.m01486 expressed protein 25 9.0
At5g12950.1 68418.m01485 expressed protein putative secreted pro... 25 9.0
At5g05160.1 68418.m00549 leucine-rich repeat transmembrane prote... 25 9.0
At4g04740.1 68417.m00695 calcium-dependent protein kinase, putat... 25 9.0
>At4g04695.1 68417.m00689 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494; contains protein kinase
domain, Pfam:PF00069; contains EF hand domain
(calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 484
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 34 TWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQSKDSL 93
T+ CK +L L+ E+ E V + +I + + G PN+V+ +K Y+ +DS+
Sbjct: 53 TYACKTILKTNLKSRED---EEAVKREIRIMKHLSGEPNIVEFKK-------AYEDRDSV 102
Query: 94 LNEMPFNIPGNKFNK 108
M + G F K
Sbjct: 103 HIVMEYCGGGELFKK 117
>At4g31010.2 68417.m04403 expressed protein
Length = 341
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 23 FTPVKMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNW 80
F P ++ E WT C + K+ ++ + + ++ K K+R++I+G ++ + E+ +
Sbjct: 111 FGPDRLDRE-WTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQG-ASLTEAERKF 166
>At4g31010.1 68417.m04404 expressed protein
Length = 405
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 23 FTPVKMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNW 80
F P ++ E WT C + K+ ++ + + ++ K K+R++I+G ++ + E+ +
Sbjct: 111 FGPDRLDRE-WTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQG-ASLTEAERKF 166
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites
at intron 18
Length = 1606
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 83 LLAKYQSKDSLLNEMPFNIPGNKFNKHNRYL 113
L+ +KD L + PF++ N FNK NR L
Sbjct: 437 LITVVDTKDQLKDIPPFHLELNFFNKPNRVL 467
>At4g04720.1 68417.m00693 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase(CDPK) [Carrot] SWISS-PROT:P28582
Length = 531
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 34 TWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVD 75
T+ CK +L KL ++ E V + +I Q + G PN+V+
Sbjct: 105 TYACKSILKRKLISKQD---KEDVKREIQIMQYLSGQPNIVE 143
>At2g17580.1 68415.m02034 polynucleotide adenylyltransferase family
protein similar to SP|P13685 Poly(A) polymerase (EC
2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 757
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 44 KLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQS-KDSLLNEMPFNI 101
KL+ L + K + IRQ I+ + N VDT K W + A K+S++ E N+
Sbjct: 24 KLQRSNCTLAEGFMEKCSSIRQVIDEDINSVDTSK-WKKVRASDAGIKNSMIPESSMNV 81
>At1g29400.2 68414.m03597 RNA recognition motif (RRM)-containing
protein similar to GI:6650523 from [Arabidopsis
thaliana]
Length = 800
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 65 QRIEGNPNMVDTEKNWPMLLAK-YQSKDSLLNEMPFNIPGNKF 106
+R+E N N V++ K + + L K +DS M NIP NK+
Sbjct: 623 RRVENNSNQVESRKQFQLDLEKILNGEDSRTTLMIKNIP-NKY 664
>At1g29400.1 68414.m03596 RNA recognition motif (RRM)-containing
protein similar to GI:6650523 from [Arabidopsis
thaliana]
Length = 800
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 65 QRIEGNPNMVDTEKNWPMLLAK-YQSKDSLLNEMPFNIPGNKF 106
+R+E N N V++ K + + L K +DS M NIP NK+
Sbjct: 623 RRVENNSNQVESRKQFQLDLEKILNGEDSRTTLMIKNIP-NKY 664
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 38 KIVLPHKLRYLENM---LNSEVVAKATKIRQRIE 68
+++L +K+ L + LN EVV K TKI+Q E
Sbjct: 1250 ELILENKVNELSGVCENLNDEVVTKTTKIKQMKE 1283
>At5g12960.1 68418.m01486 expressed protein
Length = 865
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 49 ENMLNSEVVAKATKIRQRIE--GNPNMVDTEKNWPMLLAKYQSKDSLLNEMPFNI 101
E+ LN + I ++ G P V T N+ + K++S D + E+P +I
Sbjct: 559 ESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKWKSGDQVTMELPMSI 613
>At5g12950.1 68418.m01485 expressed protein putative secreted
protein SCF41.30c, Streptomyces coelicolor,
EMBL:SCF41_30
Length = 861
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 49 ENMLNSEVVAKATKIRQRIE--GNPNMVDTEKNWPMLLAKYQSKDSLLNEMPFNI 101
E+ LN + I ++ G P V T N+ + K++S D + E+P +I
Sbjct: 555 ESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKWKSGDQVTMELPMSI 609
>At5g05160.1 68418.m00549 leucine-rich repeat transmembrane protein
kinase, putative
Length = 640
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 55 EVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQSKDSLLNEMPFNIPGNKF 106
EVVA + Q++E ++ N+ LLA Y SKD L + G+ F
Sbjct: 379 EVVASKKEFEQQME-IVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLF 429
>At4g04740.1 68417.m00695 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494
Length = 520
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 35 WTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNW 80
+ CK +L KL + L E V +I Q + G PN+V+ + ++
Sbjct: 95 YACKSILKRKLI---SELGREDVKTEIQIMQHLSGQPNVVEIKGSY 137
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.131 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,793,332
Number of Sequences: 28952
Number of extensions: 100754
Number of successful extensions: 232
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 231
Number of HSP's gapped (non-prelim): 13
length of query: 113
length of database: 12,070,560
effective HSP length: 72
effective length of query: 41
effective length of database: 9,986,016
effective search space: 409426656
effective search space used: 409426656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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