Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000633-TA|BGIBMGA000633-PA|undefined
(113 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39474| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.67
SB_900| Best HMM Match : Plasmodium_HRP (HMM E-Value=2.1) 29 1.2
SB_2420| Best HMM Match : GSH_synthase (HMM E-Value=7.9) 29 1.2
SB_55446| Best HMM Match : Sec7 (HMM E-Value=8.1) 28 1.6
SB_32167| Best HMM Match : Fucokinase (HMM E-Value=0) 28 1.6
SB_14544| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 27 3.6
SB_19154| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_49819| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_26867| Best HMM Match : Acyltransferase (HMM E-Value=4.4) 27 4.7
SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044) 26 6.3
SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11) 26 6.3
SB_32124| Best HMM Match : K-box (HMM E-Value=4.1) 26 8.3
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 26 8.3
>SB_39474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.5 bits (63), Expect = 0.67
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 4 LLRARTPTGNVEEATSIWIFTP-VKMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKAT 61
L R+ P+ ++ A +W++TP + + +T T I + H + + N E T
Sbjct: 130 LERSNRPSSKIKGAVHLWVYTPTISIKVLSYTATINITITHIIITINNKNEKEASLSLT 188
>SB_900| Best HMM Match : Plasmodium_HRP (HMM E-Value=2.1)
Length = 249
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 16 EATSIWIFTPVKMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEG 69
E T +W+ H + + W L ++ RYL M + + + + ++R++G
Sbjct: 31 EPTDLWVVQDPLGHRK-FAWGLNRCLGNRRRYLTRMADEQAIKVTQRFQERLQG 83
>SB_2420| Best HMM Match : GSH_synthase (HMM E-Value=7.9)
Length = 343
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 55 EVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQSKDSLL 94
+ A+ + + ++E P + +K+ PM L K + K+SLL
Sbjct: 136 DTTAQESVLPGKLEAGPTLPGKQKDGPMFLWKQEGKESLL 175
>SB_55446| Best HMM Match : Sec7 (HMM E-Value=8.1)
Length = 344
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 45 LRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWP---MLLAKY---QSKDSLLNEMP 98
L + N++ S +A ++RQR++ + TE+ WP LAK+ +++ N+
Sbjct: 19 LTVITNLMESRTIAGPERLRQRMQA---VTSTEQMWPSKQFFLAKHKEQRARHGKYNDTE 75
Query: 99 FNIPGN 104
+N+ N
Sbjct: 76 YNLEPN 81
>SB_32167| Best HMM Match : Fucokinase (HMM E-Value=0)
Length = 495
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 17 ATSIWIFTPVKMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAK 59
+T I I +++H E CKI+L H Y + M N+ V+ K
Sbjct: 93 STMICIDELLRIHGEEKLSECKIMLAHAGGYSQRMPNASVLGK 135
>SB_14544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.1 bits (57), Expect = 3.6
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 53 NSEVVAKATKIRQRIEGNPNMVDTEKNWPML-LAKYQ--SKDSLLNEMPFNIPGNKFNKH 109
N V AK I E P+ EK L LAKY SK LL E+ P N + H
Sbjct: 125 NRYVNAKNKYIESYGEKAPSKWMREKKISKLHLAKYDESSKKGLLLEVDLKYPQNLHDLH 184
Query: 110 NRY 112
N Y
Sbjct: 185 NHY 187
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 6 RARTPTGNVEEATSIWIFTPVKMHT-EHWTW 35
+A PTGNV ++W +T +K+ + TW
Sbjct: 1757 KAANPTGNVASKDTVWQWTYIKLKDFQSGTW 1787
>SB_19154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 HKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDT-EKNWPMLL 84
H Y+ M + VV K R+R+E +V+T ++ WP+++
Sbjct: 179 HGYPYVHLMNSPGVVLVVQKSRKRVEKTDKLVETLQEAWPVVM 221
>SB_49819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 31 EHWTWTCKIV-LPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQS 89
+H + C+I + H+ R E M N VV KI ++ +GN E + LA + S
Sbjct: 33 QHKQFRCQITEVQHQQRVFEGM-NEVVVDSTKKISRKQQGNITSTCPENTSEVNLASHHS 91
Query: 90 KDSL 93
+
Sbjct: 92 DSKI 95
>SB_26867| Best HMM Match : Acyltransferase (HMM E-Value=4.4)
Length = 655
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 26 VKMHT-EHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPN 72
+++HT H T T PH LR+ N+L S + T+I+Q +P+
Sbjct: 338 IRIHTYSHSTGTFSDQHPHVLRFNRNLLRS--TSTRTQIQQETFSDPH 383
>SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044)
Length = 1693
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 52 LNSEVVAKATKIRQRIEGNPNMVDTEKNWP 81
L + AK K + RI+ NPN+V + P
Sbjct: 546 LQFSIFAKIVKEQDRIKNNPNLVSLDTTTP 575
>SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11)
Length = 1500
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/33 (24%), Positives = 20/33 (60%)
Query: 27 KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAK 59
++H +HW+ CK +L K++ ++ + V++
Sbjct: 1089 RIHGKHWSEQCKKLLDKKVQEIQQVKQKNAVSR 1121
>SB_32124| Best HMM Match : K-box (HMM E-Value=4.1)
Length = 207
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 41 LPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEK 78
L L Y E+M + +V KAT+ Q++E N+ D EK
Sbjct: 164 LKQVLSYREDMKSVQVSQKATRQLQKLES--NLEDAEK 199
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 41 LPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEK 78
L L Y E+M + +V KAT+ Q++E N+ D EK
Sbjct: 901 LKQVLSYREDMKSVQVSQKATRQLQKLES--NLEDAEK 936
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.131 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,975,559
Number of Sequences: 59808
Number of extensions: 135297
Number of successful extensions: 234
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 227
Number of HSP's gapped (non-prelim): 16
length of query: 113
length of database: 16,821,457
effective HSP length: 73
effective length of query: 40
effective length of database: 12,455,473
effective search space: 498218920
effective search space used: 498218920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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