GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000633-TA|BGIBMGA000633-PA|undefined
         (113 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070055-1|AAH70055.1|  640|Homo sapiens guanylate binding prote...    31   1.1  
AL832576-1|CAD89936.1|  640|Homo sapiens hypothetical protein pr...    31   1.1  
AK131094-1|BAC85144.1|  649|Homo sapiens FLJ00316 protein protein.     31   1.1  
AF288814-1|AAL02054.1|  640|Homo sapiens guanylate binding prote...    31   1.1  
BC036434-1|AAH36434.1|  508|Homo sapiens VRK2 protein protein.         27   9.9  
BC027854-1|AAH27854.1|  508|Homo sapiens vaccinia related kinase...    27   9.9  
BC021663-1|AAH21663.1|  427|Homo sapiens Unknown (protein for IM...    27   9.9  
AY228370-1|AAO73050.1|  390|Homo sapiens vaccinia related kinase...    27   9.9  
AY228367-1|AAO73047.1|  508|Homo sapiens vaccinia related kinase...    27   9.9  
AK223540-1|BAD97260.1|  508|Homo sapiens vaccinia related kinase...    27   9.9  
AB000450-1|BAA19109.1|  508|Homo sapiens VRK2 protein.                 27   9.9  

>BC070055-1|AAH70055.1|  640|Homo sapiens guanylate binding protein
           4 protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 40  VLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQSKDSLLNEMPF 99
           +L HKL+  E ML  E   K+ ++ + I      +++ KN  + L K    D   N M  
Sbjct: 563 LLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIESTKNEQLRLLKI--LDMASNIMIV 620

Query: 100 NIPG 103
            +PG
Sbjct: 621 TLPG 624


>AL832576-1|CAD89936.1|  640|Homo sapiens hypothetical protein
           protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 40  VLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQSKDSLLNEMPF 99
           +L HKL+  E ML  E   K+ ++ + I      +++ KN  + L K    D   N M  
Sbjct: 563 LLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIESTKNEQLRLLKI--LDMASNIMIV 620

Query: 100 NIPG 103
            +PG
Sbjct: 621 TLPG 624


>AK131094-1|BAC85144.1|  649|Homo sapiens FLJ00316 protein protein.
          Length = 649

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 40  VLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQSKDSLLNEMPF 99
           +L HKL+  E ML  E   K+ ++ + I      +++ KN  + L K    D   N M  
Sbjct: 572 LLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIESTKNEQLRLLKI--LDMASNIMIV 629

Query: 100 NIPG 103
            +PG
Sbjct: 630 TLPG 633


>AF288814-1|AAL02054.1|  640|Homo sapiens guanylate binding protein
           4 protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 40  VLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAKYQSKDSLLNEMPF 99
           +L HKL+  E ML  E   K+ ++ + I      +++ KN  + L K    D   N M  
Sbjct: 563 LLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIESTKNEQLRLLKI--LDMASNIMIV 620

Query: 100 NIPG 103
            +PG
Sbjct: 621 TLPG 624


>BC036434-1|AAH36434.1|  508|Homo sapiens VRK2 protein protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/66 (21%), Positives = 33/66 (50%)

Query: 27  KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAK 86
           K+H+E    +C      K   L  ++N+E   ++T+ RQ+ + +   ++   ++P  ++ 
Sbjct: 363 KVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISY 422

Query: 87  YQSKDS 92
            Q  +S
Sbjct: 423 TQFPNS 428


>BC027854-1|AAH27854.1|  508|Homo sapiens vaccinia related kinase 2
           protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/66 (21%), Positives = 33/66 (50%)

Query: 27  KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAK 86
           K+H+E    +C      K   L  ++N+E   ++T+ RQ+ + +   ++   ++P  ++ 
Sbjct: 363 KVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISY 422

Query: 87  YQSKDS 92
            Q  +S
Sbjct: 423 TQFPNS 428


>BC021663-1|AAH21663.1|  427|Homo sapiens Unknown (protein for
           IMAGE:3683008) protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/64 (21%), Positives = 31/64 (48%)

Query: 27  KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAK 86
           K+H+E    +C      K   L  ++N+E   ++T+ RQ+ + +   ++   ++P    K
Sbjct: 363 KVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKKKK 422

Query: 87  YQSK 90
            + K
Sbjct: 423 KKKK 426


>AY228370-1|AAO73050.1|  390|Homo sapiens vaccinia related kinase 2
           isoform 4 protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/66 (21%), Positives = 33/66 (50%)

Query: 27  KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAK 86
           K+H+E    +C      K   L  ++N+E   ++T+ RQ+ + +   ++   ++P  ++ 
Sbjct: 245 KVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISY 304

Query: 87  YQSKDS 92
            Q  +S
Sbjct: 305 TQFPNS 310


>AY228367-1|AAO73047.1|  508|Homo sapiens vaccinia related kinase 2
           isoform 1 protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/66 (21%), Positives = 33/66 (50%)

Query: 27  KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAK 86
           K+H+E    +C      K   L  ++N+E   ++T+ RQ+ + +   ++   ++P  ++ 
Sbjct: 363 KVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISY 422

Query: 87  YQSKDS 92
            Q  +S
Sbjct: 423 TQFPNS 428


>AK223540-1|BAD97260.1|  508|Homo sapiens vaccinia related kinase 2
           variant protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/66 (21%), Positives = 33/66 (50%)

Query: 27  KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAK 86
           K+H+E    +C      K   L  ++N+E   ++T+ RQ+ + +   ++   ++P  ++ 
Sbjct: 363 KVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISY 422

Query: 87  YQSKDS 92
            Q  +S
Sbjct: 423 TQFPNS 428


>AB000450-1|BAA19109.1|  508|Homo sapiens VRK2 protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/66 (21%), Positives = 33/66 (50%)

Query: 27  KMHTEHWTWTCKIVLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMVDTEKNWPMLLAK 86
           K+H+E    +C      K   L  ++N+E   ++T+ RQ+ + +   ++   ++P  ++ 
Sbjct: 363 KVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISY 422

Query: 87  YQSKDS 92
            Q  +S
Sbjct: 423 TQFPNS 428


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.131    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,515,767
Number of Sequences: 224733
Number of extensions: 637649
Number of successful extensions: 820
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 809
Number of HSP's gapped (non-prelim): 11
length of query: 113
length of database: 73,234,838
effective HSP length: 80
effective length of query: 33
effective length of database: 55,256,198
effective search space: 1823454534
effective search space used: 1823454534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)