Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000632-TA|BGIBMGA000632-PA|IPR001680|WD-40 repeat,
IPR008042|Retrotransposon, Pao, IPR011046|WD40-like
(451 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 86 5e-17
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 83 5e-16
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 82 8e-16
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 79 8e-15
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 75 1e-13
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 75 1e-13
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 74 2e-13
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 73 3e-13
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 72 9e-13
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 71 1e-12
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 70 3e-12
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 70 4e-12
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 69 6e-12
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 66 3e-11
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 66 6e-11
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 65 8e-11
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 65 8e-11
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 64 1e-10
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 64 2e-10
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 62 1e-09
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 62 1e-09
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 61 1e-09
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 60 2e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 59 5e-09
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 59 5e-09
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 59 7e-09
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 59 7e-09
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 58 1e-08
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 58 2e-08
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 58 2e-08
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 58 2e-08
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 57 2e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 57 3e-08
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 56 4e-08
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 56 4e-08
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 56 5e-08
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 56 6e-08
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 55 8e-08
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 55 1e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 54 1e-07
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 54 2e-07
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 54 2e-07
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 54 3e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 54 3e-07
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 54 3e-07
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 53 5e-07
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 53 5e-07
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 53 5e-07
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 52 6e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 52 6e-07
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 51 2e-06
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 50 3e-06
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 3e-06
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 50 4e-06
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 50 4e-06
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 49 6e-06
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 49 6e-06
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 49 6e-06
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 49 7e-06
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 48 1e-05
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 48 1e-05
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 48 1e-05
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 48 1e-05
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 48 1e-05
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 48 1e-05
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 48 1e-05
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 48 1e-05
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 48 2e-05
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 48 2e-05
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 47 2e-05
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 47 2e-05
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 47 3e-05
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 47 3e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 46 4e-05
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 46 4e-05
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 46 5e-05
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 46 7e-05
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 46 7e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 45 9e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 45 9e-05
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 45 9e-05
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 45 1e-04
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 45 1e-04
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 44 2e-04
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 44 2e-04
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 44 2e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 44 2e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 44 2e-04
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 44 3e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 44 3e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 44 3e-04
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 44 3e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 43 4e-04
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 43 4e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 43 5e-04
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 43 5e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 43 5e-04
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 42 8e-04
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 42 8e-04
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 42 8e-04
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 42 0.001
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 42 0.001
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 41 0.001
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 41 0.001
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 41 0.001
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 41 0.001
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 41 0.001
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 41 0.001
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 41 0.001
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 41 0.001
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 41 0.001
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 41 0.001
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 41 0.002
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 41 0.002
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.003
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 40 0.003
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 40 0.004
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 40 0.004
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 40 0.004
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 40 0.004
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 39 0.006
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 39 0.006
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 39 0.006
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 39 0.006
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 39 0.008
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 39 0.008
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 39 0.008
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 38 0.010
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 38 0.010
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 38 0.010
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 38 0.010
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 38 0.014
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 38 0.014
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 38 0.014
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 38 0.014
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.018
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 38 0.018
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 38 0.018
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 38 0.018
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 37 0.024
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 37 0.024
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 37 0.024
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 37 0.032
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 37 0.032
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 36 0.042
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 36 0.042
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.042
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 36 0.042
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 36 0.042
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 36 0.042
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 36 0.055
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.055
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 36 0.055
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 36 0.055
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 36 0.055
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 36 0.055
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 36 0.073
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 36 0.073
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 36 0.073
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 36 0.073
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 36 0.073
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 36 0.073
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 36 0.073
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 35 0.097
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 35 0.097
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 35 0.097
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 35 0.097
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 35 0.13
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 35 0.13
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 35 0.13
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 34 0.17
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 34 0.17
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 34 0.17
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 34 0.17
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 34 0.17
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 34 0.17
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 34 0.17
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 34 0.17
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 34 0.22
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 33 0.29
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 33 0.29
At3g19440.1 68416.m02465 pseudouridine synthase family protein l... 33 0.29
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 33 0.29
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 33 0.39
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 33 0.39
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 33 0.39
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 33 0.39
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 33 0.39
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 33 0.51
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 33 0.51
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 33 0.51
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 33 0.51
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 33 0.51
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 32 0.68
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 32 0.90
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 32 0.90
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 32 0.90
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 31 1.2
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 31 1.2
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 31 1.6
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 31 1.6
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 31 2.1
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 31 2.1
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 31 2.1
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 31 2.1
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 31 2.1
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 31 2.1
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 30 2.7
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 30 2.7
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 30 2.7
At4g14310.1 68417.m02204 peroxisomal membrane protein-related co... 30 2.7
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 30 2.7
At3g06650.1 68416.m00774 ATP-citrate synthase, putative / ATP-ci... 30 2.7
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 30 3.6
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 30 3.6
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 30 3.6
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 30 3.6
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 4.8
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 29 4.8
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 29 6.3
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 6.3
At3g13360.1 68416.m01681 expressed protein 29 6.3
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 29 6.3
At5g66650.1 68418.m08401 expressed protein contains Pfam domain,... 29 8.4
At5g49460.1 68418.m06119 ATP-citrate synthase, putative / ATP-ci... 29 8.4
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 8.4
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 8.4
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 85.8 bits (203), Expect = 5e-17
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 13/228 (5%)
Query: 174 SAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVEL 233
+A P V + H ++ + +S G LLA+ S DKT++ NT + E
Sbjct: 8 TASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEF 67
Query: 234 TVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YN 292
T H+ + DV F D + + D + + D G + L GH+ + + +N
Sbjct: 68 TGHENGISDVAFSSDAR-----FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Query: 293 WGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDD 352
M VSGS D+TVR WD+ TG C+ ++ P+ V ++ + G L+V D
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVL------PAHSDPVTAVDFNRDGSLIVSSSYD 176
Query: 353 GTCALHDVRGSRALQR-FTPHSSDVRSVRFSPGAYYLLTAGYDGRVVL 399
G C + D ++ + V VRFSP ++L D + L
Sbjct: 177 GLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Score = 72.1 bits (169), Expect = 7e-13
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 21/262 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+ I +A+S + + S+DKT+KL T G ++ + + F +
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVET------GSLIKTLIGH---TNYAFCVN 120
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
+++++VSG D + + D GK + L HS V ++ +N G++ VS S D
Sbjct: 121 FNPQSNMIVSGSF-DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQ 367
R WD TG CV + P V+ + P+G+ ++ G D T L ++ ++ L+
Sbjct: 180 RIWDSGTGHCVKTLIDDENPP-----VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLK 234
Query: 368 RFTPH--SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISA 425
+T H + S FS + +G + V +L + H + V++
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV---HMWELNSKKLLQKLEGHTETVMNV 291
Query: 426 RWHPDDFSFLSTSADKTAVLWT 447
HP + S S DKT +WT
Sbjct: 292 ACHPTENLIASGSLDKTVRIWT 313
Score = 52.4 bits (120), Expect = 6e-07
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 278 QALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVN--IISPPAGQPSKGSAV 334
Q L+ H+ V S+ ++ G + S S DKT+R + + T +N I P + +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINT---INDPIAEPVQEFTGHENGI 74
Query: 335 ASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYD 394
+ +A R +V DD T L DV ++ H++ V F+P + +++ +D
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Query: 395 GRVVLADL-QGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
V + D+ G LP+ H D V + ++ D +S+S D +W
Sbjct: 135 ETVRIWDVTTGKCLKVLPA-----HSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
LL++ + H ++ +A P +L+A+GS DKTV++
Sbjct: 277 LLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPL--PSVPVARHPDKVIS 424
Q T H+ V SV+FS L +A D + + + P+ P H + +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASAD-KTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 425 ARWHPDDFSFLSTSADKTAVLWTI 448
+ D +S S DKT LW +
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDV 100
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 82.6 bits (195), Expect = 5e-16
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 28/274 (10%)
Query: 189 HKGSIYCLAWSPAGD----LLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVC 244
H+ S++ W PA + LL TGS D+TVKL E++L V T +
Sbjct: 13 HEDSVWAATWVPATEDRPALLLTGSLDETVKLW---------RPDELDL-VRTNTGHSLG 62
Query: 245 FIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV--LSLYNWGGAMFVSGS 302
+ + ++ + + D + V D T L V + G + V+G
Sbjct: 63 VAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGG 122
Query: 303 QDKTVRFWDLRTGGCVNIIS---PPAGQPSKGSA----VASLAVDPSGRLLVCGHDDGTC 355
+V+ WD + ++ +S P A +PS ++ V S+A P+G+ L CG DGT
Sbjct: 123 SSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTI 182
Query: 356 ALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY-DGRVVLADLQGDLTCPLPSVP 414
+ DV S+ L + H+ VRS+ FSP +L +G DG V + D +G L S
Sbjct: 183 CVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTL--LGS-- 238
Query: 415 VARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
++ H V+S PD + + S+D+T LW +
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
Score = 46.0 bits (104), Expect = 5e-05
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 37/281 (13%)
Query: 163 LQESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTH 222
L E++ L+R + T T H G + LA P+G + A+ S D V++ +T+
Sbjct: 38 LDETVKLWRPDELDLVRT----NTGHSLG-VAALAAHPSGIIAASSSIDSFVRVFDVDTN 92
Query: 223 ACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALS- 281
A + V + +V ++ T L V+GG+ + + D + LS
Sbjct: 93 AT--------IAVLEAPPSEVWGMQFEPKGTILAVAGGSS-ASVKLWDTASWRLISTLSI 143
Query: 282 ------------GHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQP 328
VLS+ ++ G GS D T+ +D+ ++ + G
Sbjct: 144 PRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLE---GHN 200
Query: 329 SKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYL 388
++ VDP R+L G DDG +HD G L + H+S V SV SP +
Sbjct: 201 MPVRSLVFSPVDP--RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAI 258
Query: 389 LTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHP 429
T D V L DL+ + + + ++ H D+V S + P
Sbjct: 259 ATGSSDRTVRLWDLK--MRAAIQT--MSNHNDQVWSVAFRP 295
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 81.8 bits (193), Expect = 8e-16
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 251 NKTSLLVSGGAGDCKIYVT----DCIIGKTFQALSGHSGHVLSLYNW--GGAMFVSGSQD 304
N L++ G+ D +I++ DC K F L GH +L L+ W G+ VS S D
Sbjct: 62 NPAGTLIASGSHDREIFLWRVHGDC---KNFMVLKGHKNAILDLH-WTSDGSQIVSASPD 117
Query: 305 KTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSG-RLLVCGHDDGTCALHDVRGS 363
KTVR WD+ TG + ++ S V S G L++ G DDGT L D+R
Sbjct: 118 KTVRAWDVETGKQIKKMA------EHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQR 171
Query: 364 RALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADL-QGDLTCPLPSVPVARHPDKV 422
A+Q F P + +V FS A + T G D V + DL +G+ T L H D +
Sbjct: 172 GAIQTF-PDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEG-----HQDTI 225
Query: 423 ISARWHPDDFSFLSTSADKTAVLWTIPP 450
PD L+ D +W + P
Sbjct: 226 TGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
Score = 75.4 bits (177), Expect = 7e-14
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 25/279 (8%)
Query: 174 SAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVEL 233
S+ AP +LL H ++Y + ++PAG L+A+GS+D+ + L + N + L
Sbjct: 40 SSLEAPIMLLSG---HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNF----MVL 92
Query: 234 TVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--Y 291
H + D+ + T+ S +VS + D + D GK + ++ HS V S
Sbjct: 93 KGHKNAILDLHW----TSDGSQIVS-ASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPT 147
Query: 292 NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHD 351
G + +SGS D T + WD+R G + P K A D + ++ G D
Sbjct: 148 RRGPPLIISGSDDGTAKLWDMRQRGAIQTF------PDKYQITAVSFSDAADKIFTGGVD 201
Query: 352 DGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ---GDLTC 408
+ + D+R A H + + SP YLLT G D ++ + D++ C
Sbjct: 202 NDV-KVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRC 260
Query: 409 PLPSVPVARHPDK-VISARWHPDDFSFLSTSADKTAVLW 446
+ +K ++ W PD + S+D+ +W
Sbjct: 261 VKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 78.6 bits (185), Expect = 8e-15
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHAC--NLEGQEVELTVHDGTV 240
LK + H +I C+ +S G+LLA+ S DKT+ L + ++ EG H +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEG-------HSSGI 88
Query: 241 RDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIG-KTFQALSGHSGHVLSL-YNWGGAMF 298
D+ + D+ S + DC + + D + + L GH+ V + +N +
Sbjct: 89 SDLAWSSDSHYTCS-----ASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLI 143
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALH 358
VSGS D+T+R W+++TG CV +I + ++S+ + G L+V DG+C +
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIK------AHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 359 DVRGSRALQRFTPHSSD-VRSVRFSPGAYYLLTAGYDGRVVLAD 401
D + L+ S V +FSP ++L A D + L++
Sbjct: 198 DAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSN 241
Score = 71.3 bits (167), Expect = 1e-12
Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 26/272 (9%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLM-AFNTHACNLEGQEVELTVHDGTV 240
L+ R + H I LAWS + S+D T+++ A + + C L V G
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYEC--------LKVLRGHT 128
Query: 241 RDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFV 299
V + N S L+ G+ D I + + GK + + HS + S+ +N G++ V
Sbjct: 129 NFVFCV--NFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIV 186
Query: 300 SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHD 359
S S D + + WD + G C+ + K AV+ P+G+ ++ D T L +
Sbjct: 187 SASHDGSCKIWDAKEGTCLKTLI-----DDKSPAVSFAKFSPNGKFILVATLDSTLKLSN 241
Query: 360 VRGSRALQRFTPHSSDVRSV--RFS-PGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVA 416
+ L+ +T H++ V + FS Y+++ D V L DLQ +
Sbjct: 242 YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQ----RLE 297
Query: 417 RHPDKVISARWHP--DDFSFLSTSADKTAVLW 446
H D VIS HP ++ S DKT +W
Sbjct: 298 GHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 58.4 bits (135), Expect = 9e-09
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 178 APTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHD 237
+P LK + H ++C+ ++P +L+ +GS D+T+++ T C + H
Sbjct: 116 SPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKC-----VRMIKAHS 170
Query: 238 GTVRDVCFIEDTTNKTSLLVSGG-AGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWG 294
+ V F D SL+VS G CKI+ D G + L +S ++
Sbjct: 171 MPISSVHFNRD----GSLIVSASHDGSCKIW--DAKEGTCLKTLIDDKSPAVSFAKFSPN 224
Query: 295 GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
G + + D T++ + TG + + + G +K + S +G+ +V G +D
Sbjct: 225 GKFILVATLDSTLKLSNYATGKFLKVYT---GHTNKVFCITSAFSVTNGKYIVSGSEDNC 281
Query: 355 CALHDVRGSRALQRFTPHSSDVRSVRFSP 383
L D++ LQR H+ V SV P
Sbjct: 282 VYLWDLQARNILQRLEGHTDAVISVSCHP 310
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 5 NGGPQSSTPVPGPTAVG-IESSDSRPTFKPVTVLEDLQ----AVRCAEFHPNGKLYAVGS 59
+GG +S V + G +S + P +KP L+ L+ A+ C +F +G L A S
Sbjct: 3 SGGNGTSNGVANANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASAS 62
Query: 60 NTKTLRICS 68
KT+ + S
Sbjct: 63 VDKTMILWS 71
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 35 TVLEDLQ-AVRCAEFHPNGKLYAVGSNTKTLRICSY 69
T+++D AV A+F PNGK V + TL++ +Y
Sbjct: 207 TLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY 242
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 74.9 bits (176), Expect = 1e-13
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 189 HKGSIYCLAWS-PAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
H ++ CL + +L TG D V L A L L H + V F
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS-----LYGHSSGIDSVTF-- 67
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKT 306
+ + +LV+ GA I + D K + L+GH + +S+ ++ G F SGS D
Sbjct: 68 ---DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
++ WD+R GC++ G ++G V L P GR +V G +D + D+ + L
Sbjct: 125 LKIWDIRKKGCIHTYK---GH-TRGVNV--LRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
F H ++S+ F P + L T D V DL+
Sbjct: 179 TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Score = 60.5 bits (140), Expect = 2e-09
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 255 LLVSGGAGDCKIYVTDCIIGKTFQALS--GHSGHVLSL-YNWGGAMFVSGSQDKTVRFWD 311
+LV+GG D K+ + IGK LS GHS + S+ ++ + +G+ T++ WD
Sbjct: 31 VLVTGGE-DHKVNLW--AIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 312 LRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTP 371
L V ++ S S+ P G G D + D+R + +
Sbjct: 88 LEEAKIVRTLT------GHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Query: 372 HSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ-GDLTCPLPSVPVARHPDKVISARWHPD 430
H+ V +RF+P ++++ G D V + DL G L S H ++ S +HP
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS-----HEGQIQSLDFHPH 196
Query: 431 DFSFLSTSADKTAVLWTI 448
+F + SAD+T W +
Sbjct: 197 EFLLATGSADRTVKFWDL 214
Score = 56.4 bits (130), Expect = 4e-08
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+ + + + P G+ A+GS D +K+ C + + G R V +
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC--------IHTYKGHTRGVNVLRF 151
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
T + +VSGG D + V D GK H G + SL ++ + +GS D+TV
Sbjct: 152 TPDGR-WVVSGGE-DNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCG 349
+FWDL T + +G P + + V L+ +P G+ ++CG
Sbjct: 210 KFWDLETFELIG-----SGGP-ETAGVRCLSFNPDGKTVLCG 245
Score = 35.1 bits (77), Expect = 0.097
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNT 221
LL K H+G I L + P LLATGS D+TVK T
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 74.9 bits (176), Expect = 1e-13
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 189 HKGSIYCLAWS-PAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
H ++ CL + +L TG D V L A L L H + V F
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS-----LYGHSSGIDSVTF-- 67
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKT 306
+ + +LV+ GA I + D K + L+GH + +S+ ++ G F SGS D
Sbjct: 68 ---DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
++ WD+R GC++ G ++G V L P GR +V G +D + D+ + L
Sbjct: 125 LKIWDIRKKGCIHTYK---GH-TRGVNV--LRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
F H ++S+ F P + L T D V DL+
Sbjct: 179 TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Score = 60.5 bits (140), Expect = 2e-09
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 255 LLVSGGAGDCKIYVTDCIIGKTFQALS--GHSGHVLSL-YNWGGAMFVSGSQDKTVRFWD 311
+LV+GG D K+ + IGK LS GHS + S+ ++ + +G+ T++ WD
Sbjct: 31 VLVTGGE-DHKVNLW--AIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 312 LRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTP 371
L V ++ S S+ P G G D + D+R + +
Sbjct: 88 LEEAKIVRTLT------GHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Query: 372 HSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ-GDLTCPLPSVPVARHPDKVISARWHPD 430
H+ V +RF+P ++++ G D V + DL G L S H ++ S +HP
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS-----HEGQIQSLDFHPH 196
Query: 431 DFSFLSTSADKTAVLWTI 448
+F + SAD+T W +
Sbjct: 197 EFLLATGSADRTVKFWDL 214
Score = 56.4 bits (130), Expect = 4e-08
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+ + + + P G+ A+GS D +K+ C + + G R V +
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC--------IHTYKGHTRGVNVLRF 151
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
T + +VSGG D + V D GK H G + SL ++ + +GS D+TV
Sbjct: 152 TPDGR-WVVSGGE-DNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCG 349
+FWDL T + +G P + + V L+ +P G+ ++CG
Sbjct: 210 KFWDLETFELIG-----SGGP-ETAGVRCLSFNPDGKTVLCG 245
Score = 35.1 bits (77), Expect = 0.097
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNT 221
LL K H+G I L + P LLATGS D+TVK T
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 73.7 bits (173), Expect = 2e-13
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 18/217 (8%)
Query: 189 HKGSIYCLAWS-PAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
H ++ CL + +L TG D V L A L L H + V F
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS-----LYGHSSGIDSVTF-- 160
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKT 306
+ + LV+ GA I + D K + L+GH + +S+ ++ G F SGS D
Sbjct: 161 ---DASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTN 217
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
++ WD+R GC++ G ++G V L P GR +V G +D + D+ + L
Sbjct: 218 LKIWDIRKKGCIHTYK---GH-TRGVNV--LRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 271
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
F H ++S+ F P + L T D V DL+
Sbjct: 272 HEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLE 308
Score = 63.3 bits (147), Expect = 3e-10
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 255 LLVSGGAGDCKIYVTDCIIGKTFQALS--GHSGHVLSL-YNWGGAMFVSGSQDKTVRFWD 311
+LV+GG D K+ + IGK LS GHS + S+ ++ + +G+ T++ WD
Sbjct: 124 VLVTGGE-DHKVNLW--AIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD 180
Query: 312 LRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTP 371
L V ++ S S+ P G G D + D+R + +
Sbjct: 181 LEEAKVVRTLT------GHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 234
Query: 372 HSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ-GDLTCPLPSVPVARHPDKVISARWHPD 430
H+ V +RF+P ++++ G D V + DL G L S H K+ S +HP
Sbjct: 235 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS-----HEGKIQSLDFHPH 289
Query: 431 DFSFLSTSADKTAVLWTI 448
+F + SADKT W +
Sbjct: 290 EFLLATGSADKTVKFWDL 307
Score = 56.4 bits (130), Expect = 4e-08
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+ + + + P G+ A+GS D +K+ C + + G R V +
Sbjct: 193 HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGC--------IHTYKGHTRGVNVLRF 244
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
T + +VSGG D + V D GK H G + SL ++ + +GS DKTV
Sbjct: 245 TPDGR-WIVSGGE-DNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTV 302
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCG 349
+FWDL T + G + G V L +P G+ ++CG
Sbjct: 303 KFWDLETFELIG----SGGTETTG--VRCLTFNPDGKSVLCG 338
Score = 36.3 bits (80), Expect = 0.042
Identities = 20/40 (50%), Positives = 22/40 (55%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNT 221
LL K H+G I L + P LLATGS DKTVK T
Sbjct: 270 LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 309
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 73.3 bits (172), Expect = 3e-13
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H G +Y +SP GD + + S D T++L + +A NL V H+ V D F
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA-NL----VCYKGHNYPVWDAQFSPF 471
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNW--GGAMFVSGSQDKT 306
S A +I+ D I + + ++GH LS +W +GS DKT
Sbjct: 472 GHYFASCSHDRTA---RIWSMDRI--QPLRIMAGH----LSDVDWHPNCNYIATGSSDKT 522
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
VR WD++TG CV I S V SLA+ P GR + G +DGT + D+ +R +
Sbjct: 523 VRLWDVQTGECVRIFI------GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI 576
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
H+S V S+ +S L + D V L D+
Sbjct: 577 TPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 612
Score = 56.0 bits (129), Expect = 5e-08
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H ++ +SP G A+ S+D+T ++ + + + L + G + DV +
Sbjct: 457 KGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMD--------RIQPLRIMAGHLSDVDW- 507
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDK 305
+ ++ G+ D + + D G+ + GH VLSL + G SG +D
Sbjct: 508 ----HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDG 563
Query: 306 TVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
T+ WDL T C I+P G S V SL+ G LL G D T L DV S
Sbjct: 564 TIMMWDLSTARC---ITPLMGH---NSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 617
Query: 366 L---QRFTPHSSDVRSVRFSP 383
L + +S+ +RS+R P
Sbjct: 618 LTKAEEKNGNSNRLRSLRTFP 638
Score = 48.0 bits (109), Expect = 1e-05
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 13/154 (8%)
Query: 295 GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
G F S S D+T R W + + I+ AG ++ + P+ + G D T
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIM---AGH------LSDVDWHPNCNYIATGSSDKT 522
Query: 355 CALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVP 414
L DV+ ++ F H S V S+ SP Y+ + DG +++ DL C P
Sbjct: 523 VRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS-TARC---ITP 578
Query: 415 VARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ H V S + + S SAD T LW +
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 612
Score = 41.1 bits (92), Expect = 0.001
Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 24/242 (9%)
Query: 217 MAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYV----TDCI 272
++F T G HDG++ F + + + G AG + +D
Sbjct: 343 VSFYTFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQS 402
Query: 273 IG----KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQ 327
IG +++ L GHSG V S ++ G +S S D T+R W + N++
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLN--ANLVC----Y 456
Query: 328 PSKGSAVASLAVDPSGRLLV-CGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAY 386
V P G C H D T + + + L+ H SD V + P
Sbjct: 457 KGHNYPVWDAQFSPFGHYFASCSH-DRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCN 512
Query: 387 YLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
Y+ T D V L D+Q T + + H V+S PD S D T ++W
Sbjct: 513 YIATGSSDKTVRLWDVQ---TGECVRIFIG-HRSMVLSLAMSPDGRYMASGDEDGTIMMW 568
Query: 447 TI 448
+
Sbjct: 569 DL 570
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 71.7 bits (168), Expect = 9e-13
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 19/274 (6%)
Query: 177 TAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVH 236
T P+ R H+G + + L TG D+ VK+ N+ ++ L
Sbjct: 218 TIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTL-IKSLYGSL--- 273
Query: 237 DGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV--LSLYNWG 294
G + D+ D NK+ V ++V D G+ L+GH+ V + + +
Sbjct: 274 -GNILDMAVTHD--NKS---VIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFS 327
Query: 295 GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
VS + D+T++ WDL G C N + S +A+ L++D G + GH DG
Sbjct: 328 SRHVVSAAYDRTIKLWDLHKGYCTNTVL----FTSNCNAIC-LSID--GLTVFSGHMDGN 380
Query: 355 CALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVP 414
L D++ + L HSS V SV S +LT+G D + D + C
Sbjct: 381 LRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRAS 440
Query: 415 VARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
R + PDD + SAD + +W++
Sbjct: 441 GNRLASNWSRSCISPDDDYVAAGSADGSVHVWSL 474
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 71.3 bits (167), Expect = 1e-12
Identities = 76/263 (28%), Positives = 109/263 (41%), Gaps = 23/263 (8%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K HK + +SP D LAT S D+T KL + T L+ E L D R V F
Sbjct: 295 KDHKERATDVVFSPVDDCLATASADRTAKL--WKTDGTLLQTFEGHL---DRLAR-VAF- 347
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDK 305
+ + + + D + D G GHS V + + GA+ S D
Sbjct: 348 ----HPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDS 403
Query: 306 TVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
R WDLRTG + + V S+ P+G L G +D C + D+R ++
Sbjct: 404 LARVWDLRTGRSILVFQGHI------KPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457
Query: 366 LQRFTPHSSDVRSVRFSPG-AYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVIS 424
L H++ V V++ P Y+L TA YD +V + G + S+ A H KV S
Sbjct: 458 LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNI--WSGRDFSLVKSL--AGHESKVAS 513
Query: 425 ARWHPDDFSFLSTSADKTAVLWT 447
D + S D+T LWT
Sbjct: 514 LDITADSSCIATVSHDRTIKLWT 536
Score = 52.8 bits (121), Expect = 5e-07
Identities = 57/226 (25%), Positives = 90/226 (39%), Gaps = 18/226 (7%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
LL+ + H + +A+ P+G L T S DKT +L NT A EL + +G R
Sbjct: 331 LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGA--------ELLLQEGHSR 382
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVS 300
V I + L + D V D G++ GH V S+ ++ G S
Sbjct: 383 SVYGI--AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLAS 440
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHD 359
G +D R WDLR + II P+ + V+ + +P G L D +
Sbjct: 441 GGEDNQCRIWDLRMRKSLYII------PAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
Query: 360 VRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
R ++ H S V S+ + + + T +D + L G+
Sbjct: 495 GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGN 540
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 70.1 bits (164), Expect = 3e-12
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HK S+ CLA+S G LLA+G D V++ F+ + L+ V DG + ++
Sbjct: 112 HKDSVSCLAFSYDGQLLASGGLDGVVQI--FDASSGTLK------CVLDGPGAGIEWVR- 162
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTV 307
+ +V G+ DC +++ + SGH+ +V + G + +GS D ++
Sbjct: 163 -WHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASL 221
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQ 367
W+ +T ++I+ G P + L ++ + L + G DG+ + ++ + +
Sbjct: 222 IVWNPKTCESIHIVK---GHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVS 278
Query: 368 RFTPHSSDVRSVRFSPGAYYL---LTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVIS 424
H+ V V+FSP + + T G D ++++ DLQ P + H + V S
Sbjct: 279 SLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHS----TPRF-ICEHEEGVTS 333
Query: 425 ARWHPDDFSFLSTSADKTAVLW 446
W + A+ T +W
Sbjct: 334 LTWIGTSKYLATGCANGTVSIW 355
Score = 41.1 bits (92), Expect = 0.001
Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 32/270 (11%)
Query: 189 HKGSIYCLAWSPA-GDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
HKG +Y LA SP L+ATG D L EL H +V + F
Sbjct: 69 HKGELYALACSPTDATLVATGGGDDKAFLWKIGN-----GDWAAELPGHKDSVSCLAFSY 123
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNW--GGAMFVSGSQDK 305
D LL SGG D + + D G T + + G + W G + ++GS+D
Sbjct: 124 D----GQLLASGGL-DGVVQIFDASSG-TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDC 177
Query: 306 TVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
++ W+ +N+ S V P G+L+ G DD + + + + +
Sbjct: 178 SLWMWNADKEAYLNMFS------GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCES 231
Query: 366 LQ--RFTP-HSSDVRSVRFSPGAYYLLTAGYDGRVVLADL-QGDLTCPLPSVPVARHPDK 421
+ + P H+ + + + + ++ DG V + ++ G + L S H D
Sbjct: 232 IHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNS-----HTDS 286
Query: 422 VISARWHPDDFSF---LSTSADKTAVLWTI 448
V ++ P + + DK ++W +
Sbjct: 287 VECVKFSPSSATIPLAATGGMDKKLIIWDL 316
Score = 35.1 bits (77), Expect = 0.097
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
++K +H + CL + L +GS D +V H N+ +V +++ T
Sbjct: 234 IVKGHPYHTEGLTCLDINSNSSLAISGSKDGSV-------HIVNIVTGKVVSSLNSHTDS 286
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVS- 300
C ++ T L + G D K+ + D + T + + H V SL G + +++
Sbjct: 287 VECVKFSPSSATIPLAATGGMDKKLIIWD-LQHSTPRFICEHEEGVTSLTWIGTSKYLAT 345
Query: 301 GSQDKTVRFWDLRTGGCVN 319
G + TV WD G CV+
Sbjct: 346 GCANGTVSIWDSLLGNCVH 364
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 69.7 bits (163), Expect = 4e-12
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 18/217 (8%)
Query: 189 HKGSIYCLA-WSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
H ++ CL+ L TG +D V L A + L H V V F
Sbjct: 14 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMS-----LCGHTSAVDSVAF-- 66
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKT 306
+ +LV GA I + D K +A +GH + ++ ++ G SGS D
Sbjct: 67 ---DSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDAN 123
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
++ WD+R GC+ G S+G ++++ P GR +V G D + D+ + L
Sbjct: 124 LKIWDIRKKGCIQTYK---GH-SRG--ISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLL 177
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
F H +RS+ F P + L T D V DL+
Sbjct: 178 HEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLE 214
Score = 67.3 bits (157), Expect = 2e-11
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGK--TFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVR 308
KTS L G D K+ + IGK + +L GH+ V S+ ++ + ++G+ ++
Sbjct: 26 KTSRLFITGGDDYKVNLW--AIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIK 83
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQR 368
WD+ V + G S SAV P G L G D + D+R +Q
Sbjct: 84 LWDVEEAKMVRAFT---GHRSNCSAVE---FHPFGEFLASGSSDANLKIWDIRKKGCIQT 137
Query: 369 FTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWH 428
+ HS + ++RF+P ++++ G D V + DLT H + S +H
Sbjct: 138 YKGHSRGISTIRFTPDGRWVVSGGLDNVVKV----WDLTAGKLLHEFKFHEGPIRSLDFH 193
Query: 429 PDDFSFLSTSADKTAVLWTI 448
P +F + SAD+T W +
Sbjct: 194 PLEFLLATGSADRTVKFWDL 213
Score = 64.9 bits (151), Expect = 1e-10
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+ + + + P G+ LA+GS+D +K+ C + + G R + I
Sbjct: 99 HRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGC--------IQTYKGHSRGISTIRF 150
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
T + +VSGG D + V D GK H G + SL ++ + +GS D+TV
Sbjct: 151 TPDGR-WVVSGGL-DNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTV 208
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDD 352
+FWDL T + P A + V S+ P GR L CG DD
Sbjct: 209 KFWDLETFELIGSTRPEA------TGVRSIKFHPDGRTLFCGLDD 247
Score = 50.0 bits (114), Expect = 3e-06
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 274 GKTFQALSGHSGHV--LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKG 331
G Q HS +V LS+ +F++G D V W + G +++S G S
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAI--GKPTSLMSL-CGHTS-- 59
Query: 332 SAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
AV S+A D + L++ G G L DV ++ ++ FT H S+ +V F P +L +
Sbjct: 60 -AVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASG 118
Query: 392 GYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
D + + D++ C H + + R+ PD +S D +W +
Sbjct: 119 SSDANLKIWDIR-KKGC---IQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171
Score = 44.8 bits (101), Expect = 1e-04
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 257 VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTG 315
++ G+ D + + D Q GHS + ++ + G VSG D V+ WDL G
Sbjct: 115 LASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG 174
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSD 375
++ G + SL P LL G D T D+ + P ++
Sbjct: 175 KLLHEFKFHEGP------IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATG 228
Query: 376 VRSVRFSP 383
VRS++F P
Sbjct: 229 VRSIKFHP 236
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNT 221
LL K H+G I L + P LLATGS D+TVK T
Sbjct: 176 LLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 215
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 68.9 bits (161), Expect = 6e-12
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
L+ HKG I+ L W+ GD L TGS D+T + ++ A E + + H G
Sbjct: 357 LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTA--VVWDVKA---EEWKQQFEFHSGPTL 411
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQA--LSGHSGHVLSLYNWG--GAM 297
DV D N S S + D IY+ C IG+T A +GH G V + W G++
Sbjct: 412 DV----DWRNNVSFATS--STDSMIYL--CKIGETRPAKTFTGHQGEV-NCVKWDPTGSL 462
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQ--PSKGSAVASLAVDPSGRL-LVCGHDDGT 354
S S D T + W+++ V+ + + + S +P+ +L L D T
Sbjct: 463 LASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDST 522
Query: 355 CALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYD 394
L D + L F H V S+ FSP Y+ + D
Sbjct: 523 VKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLD 562
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+G + C+ W P G LLA+ S+D T K+ +N E T T+R
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKI--WNIKQSTFVHDLREHTKEIYTIRWSPTGPG 504
Query: 249 TTNKTSLLVSGGAG-DCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKT 306
T N L A D + + D +GK + +GH V SL ++ G SGS DK+
Sbjct: 505 TNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKS 564
Query: 307 VRFWDLRTGGCVNIISPPAG 326
+ W ++ G V + G
Sbjct: 565 IHIWSIKEGKIVKTYTGNGG 584
Score = 52.0 bits (119), Expect = 8e-07
Identities = 61/279 (21%), Positives = 109/279 (39%), Gaps = 37/279 (13%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAF--NTHACNLEGQEVELTV-------HDGT 239
H + AWSP+ LLA+GS D T ++ + + G+ + + +
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEK 323
Query: 240 VRDVCFIEDTTNKTSLLVSGGA-GDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAM 297
+DV + D + +LL +G G +I+ + G+ LS H G + SL +N G
Sbjct: 324 SKDVTTL-DWNGEGTLLATGSCDGQARIWTLN---GELISTLSKHKGPIFSLKWNKKGDY 379
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRL-LVCGHDDGTCA 356
++GS D+T WD++ + Q + + +L VD + D
Sbjct: 380 LLTGSVDRTAVVWDVK--------AEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIY 431
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVA 416
L + +R + FT H +V V++ P L + D + +++ +
Sbjct: 432 LCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVH----DLR 487
Query: 417 RHPDKVISARWHP---------DDFSFLSTSADKTAVLW 446
H ++ + RW P + S S D T LW
Sbjct: 488 EHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Score = 50.4 bits (115), Expect = 2e-06
Identities = 62/263 (23%), Positives = 100/263 (38%), Gaps = 32/263 (12%)
Query: 196 LAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSL 255
L W+ G LLATGS D ++ N + L+ H G + F K
Sbjct: 330 LDWNGEGTLLATGSCDGQARIWTLNGELIS------TLSKHKGPI----FSLKWNKKGDY 379
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG 315
L++G D V D + Q HSG L + F + S D + +
Sbjct: 380 LLTGSV-DRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGET 438
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSD 375
+ G+ V + DP+G LL DD T + +++ S + H+ +
Sbjct: 439 RPAKTFTGHQGE------VNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKE 492
Query: 376 VRSVRFSPGA---------YYLLTAGYDGRVVLADLQ-GDLTCPLPSVPVARHPDKVISA 425
+ ++R+SP L +A +D V L D + G + C H + V S
Sbjct: 493 IYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNG-----HREPVYSL 547
Query: 426 RWHPDDFSFLSTSADKTAVLWTI 448
+ P+ S S DK+ +W+I
Sbjct: 548 AFSPNGEYIASGSLDKSIHIWSI 570
Score = 43.6 bits (98), Expect = 3e-04
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 269 TDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDL--------RTGGCVN 319
T I + L GH+ V + ++ ++ SGS D T R W + TG +N
Sbjct: 250 TSHIPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNIN 309
Query: 320 --IISPPAGQPS-KGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDV 376
I+ G+ + K V +L + G LL G DG + + G + + H +
Sbjct: 310 ALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNG-ELISTLSKHKGPI 368
Query: 377 RSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
S++++ YLLT D V+ D++ +
Sbjct: 369 FSLKWNKKGDYLLTGSVDRTAVVWDVKAE 397
Score = 38.7 bits (86), Expect = 0.008
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 332 SAVASLAVDPSGRLLVCGHDDGTC-----------ALHDVRGSRAL------QRFTPHSS 374
S V + A PS LL G D T A+H R AL + S
Sbjct: 266 SEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSK 325
Query: 375 DVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSF 434
DV ++ ++ L T DG+ + L G+L L ++H + S +W+
Sbjct: 326 DVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTL-----SKHKGPIFSLKWNKKGDYL 380
Query: 435 LSTSADKTAVLWTI 448
L+ S D+TAV+W +
Sbjct: 381 LTGSVDRTAVVWDV 394
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTIP 449
H +V + W P S S D TA +W+IP
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIWSIP 295
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 66.5 bits (155), Expect = 3e-11
Identities = 70/231 (30%), Positives = 96/231 (41%), Gaps = 28/231 (12%)
Query: 197 AWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE--LTVHDGTVRDVCFIEDTTNKTS 254
A+SP G +A G D + + ++ A V LT H G V ++ +
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN--EDAH 171
Query: 255 LLVSGGAGDCKIY-----VTDCIIGKTFQALSGHSGHVLSLYNWGGA--MFVSGSQDKTV 307
L+ S G C ++ + + G FQ SGH+ VLS+ G F+SGS D T
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGGEFQ--SGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 308 RFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
R WD R V G V ++ P G G DDGTC L+D+R L
Sbjct: 230 RLWDTRAASRAVRTFHGHEGD------VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 283
Query: 367 QRFTPH----SSDVRSVRFSPGAYYLLTAGYDGR---VVLADLQGDLTCPL 410
Q + PH + V S+ FS LL AGY V L G+ +C L
Sbjct: 284 QVYQPHGDGENGPVTSIAFSVSG-RLLFAGYASNNTCYVWDTLLGEFSCRL 333
Score = 43.2 bits (97), Expect = 4e-04
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 22/190 (11%)
Query: 269 TDCIIGKTFQALSGHSGHVLSLYNWGGAM--FVSGSQDKTVRFWDLRTGGCVNIISPPAG 326
TD + +T Q GH+G V SL +W VS SQD + W+ T + I P
Sbjct: 53 TDLVCCRTLQ---GHTGKVYSL-DWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCA 108
Query: 327 QPSKGSAVASLAVDPSGRLLVCGHDDGTCALH------DVRGSRALQR-FTPHSSDVRSV 379
V + A P+G+ + CG D C++ D G+ + R T H V
Sbjct: 109 W------VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCC 162
Query: 380 RFSPGA-YYLLTAGYDGRVVLADLQGDL-TCPLPSVPVARHPDKVISARWHPDDFS-FLS 436
++ P +L+T+ D +L D+ L T + H V+S + + F+S
Sbjct: 163 QYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFIS 222
Query: 437 TSADKTAVLW 446
S D TA LW
Sbjct: 223 GSCDSTARLW 232
Score = 31.5 bits (68), Expect = 1.2
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 185 RTKH-HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDV 243
RT H H+G + + + P G TGS+D T +L T L+ + +G V +
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT-GHQLQVYQPHGDGENGPVTSI 300
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGK 275
F + LL +G A + YV D ++G+
Sbjct: 301 AF----SVSGRLLFAGYASNNTCYVWDTLLGE 328
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
V SL P +V DG + + S+ + V + FSP + G
Sbjct: 68 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 127
Query: 394 DGRVVLADLQGDLTCPLPSVPVAR----HPDKVISARWHP-DDFSFLSTSADKTAVLWTI 448
D + L +VPV+R H V ++ P +D +++S D+T +LW +
Sbjct: 128 DSVCSIFSLSSTADKD-GTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDV 186
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 65.7 bits (153), Expect = 6e-11
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+ + + + P G+ LA+GS+D +++ C + + G R + IE
Sbjct: 48 HRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGC--------IQTYKGHTRGISTIEF 99
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
+ + +VSGG D + V D GK H G + SL ++ + +GS D+TV
Sbjct: 100 SPDGR-WVVSGGL-DNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTV 157
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
+FWDL T + P A + V ++A P G+ L CG DDG
Sbjct: 158 KFWDLETFELIGTTRPEA------TGVRAIAFHPDGQTLFCGLDDG 197
Score = 65.3 bits (152), Expect = 8e-11
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 251 NKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRF 309
N +LV GA I + D K +A +GH + ++ ++ G SGS D +R
Sbjct: 16 NSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV 75
Query: 310 WDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRF 369
WD R GC+ G ++G ++++ P GR +V G D + D+ + L F
Sbjct: 76 WDTRKKGCIQTYK---GH-TRG--ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 129
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
H +RS+ F P + L T D V DL+
Sbjct: 130 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLE 163
Score = 59.7 bits (138), Expect = 4e-09
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 279 ALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASL 337
+L GH+ V S+ +N + ++G+ ++ WDL V + G S SAV
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFT---GHRSNCSAVE-- 56
Query: 338 AVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
P G L G D + D R +Q + H+ + ++ FSP ++++ G D V
Sbjct: 57 -FHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVV 115
Query: 398 VLADLQ-GDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ DL G L H + S +HP +F + SAD+T W +
Sbjct: 116 KVWDLTAGKLLHEFKC-----HEGPIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 33.9 bits (74), Expect = 0.22
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNT 221
LL K H+G I L + P LLATGS D+TVK T
Sbjct: 125 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 164
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 65.3 bits (152), Expect = 8e-11
Identities = 65/211 (30%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 197 AWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE--LTVHDGTVRDVCFIEDTTNKTS 254
A+SP G +A G D + + ++ A V LT H G V ++ +
Sbjct: 52 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN--EDAH 109
Query: 255 LLVSGGAGDCKIY-----VTDCIIGKTFQALSGHSGHVLSLYNWGGA--MFVSGSQDKTV 307
L+ S G C ++ + + G FQ SGH+ VLS+ G F+SGS D T
Sbjct: 110 LITSSGDQTCILWDVTTGLKTSVFGGEFQ--SGHTADVLSVSISGSNPNWFISGSCDSTA 167
Query: 308 RFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
R WD R V G V ++ P G G DDGTC L+D+R L
Sbjct: 168 RLWDTRAASRAVRTFHGHEGD------VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 221
Query: 367 QRFTPH----SSDVRSVRFSPGAYYLLTAGY 393
Q + PH + V S+ FS LL AGY
Sbjct: 222 QVYQPHGDGENGPVTSIAFSVSG-RLLFAGY 251
Score = 54.4 bits (125), Expect = 1e-07
Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 24/223 (10%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE-LTVHDGTVRDVCFIEDTTN 251
+Y L W+P + + + S D +L+ +N L Q+ + + V F + N
Sbjct: 6 VYSLDWTPERNRIVSASQDG--RLIVWNA----LTSQKTHAIKLPCAWVMTCAF---SPN 56
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGK-----TFQALSGHSGHVLSLYNWGG--AMFVSGSQD 304
S+ G C I+ K + L+GH G+V A ++ S D
Sbjct: 57 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 116
Query: 305 KTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSG---RLLVCGHDDGTCALHDVR 361
+T WD+ TG ++ G+ G L+V SG + G D T L D R
Sbjct: 117 QTCILWDVTTGLKTSVFG---GEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR 173
Query: 362 G-SRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
SRA++ F H DV +V+F P Y T DG L D++
Sbjct: 174 AASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIR 216
Score = 36.3 bits (80), Expect = 0.042
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 185 RTKH-HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDV 243
RT H H+G + + + P G TGS+D T +L T L+ + +G V +
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT-GHQLQVYQPHGDGENGPVTSI 238
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQAL----SGHSGHVLSL-YNWGGAMF 298
F + LL +G A + YV D ++G+ L H + L + G+
Sbjct: 239 AF----SVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSAL 294
Query: 299 VSGSQDKTVRFW 310
+GS D ++ W
Sbjct: 295 CTGSWDSNLKIW 306
Score = 35.5 bits (78), Expect = 0.073
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 16/158 (10%)
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALH 358
VS SQD + W+ T + I P V + A P+G+ + CG D C++
Sbjct: 19 VSASQDGRLIVWNALTSQKTHAIKLPCAW------VMTCAFSPNGQSVACGGLDSVCSIF 72
Query: 359 ------DVRGSRALQRF-TPHSSDVRSVRFSPGA-YYLLTAGYDGRVVLADLQGDL-TCP 409
D G+ + R T H V ++ P +L+T+ D +L D+ L T
Sbjct: 73 SLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSV 132
Query: 410 LPSVPVARHPDKVISARWHPDDFS-FLSTSADKTAVLW 446
+ H V+S + + F+S S D TA LW
Sbjct: 133 FGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLW 170
Score = 33.1 bits (72), Expect = 0.39
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTH 222
H+ I CL S G L TGS D +K+ AF H
Sbjct: 278 HRNRISCLGLSADGSALCTGSWDSNLKIWAFGGH 311
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
V SL P +V DG + + S+ + V + FSP + G
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 65
Query: 394 DGRVVLADLQGDLTCPLPSVPVAR----HPDKVISARWHP-DDFSFLSTSADKTAVLWTI 448
D + L +VPV+R H V ++ P +D +++S D+T +LW +
Sbjct: 66 DSVCSIFSLSSTADKD-GTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDV 124
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 65.3 bits (152), Expect = 8e-11
Identities = 65/211 (30%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 197 AWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE--LTVHDGTVRDVCFIEDTTNKTS 254
A+SP G +A G D + + ++ A V LT H G V ++ +
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN--EDAH 171
Query: 255 LLVSGGAGDCKIY-----VTDCIIGKTFQALSGHSGHVLSLYNWGGA--MFVSGSQDKTV 307
L+ S G C ++ + + G FQ SGH+ VLS+ G F+SGS D T
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGGEFQ--SGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 308 RFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
R WD R V G V ++ P G G DDGTC L+D+R L
Sbjct: 230 RLWDTRAASRAVRTFHGHEGD------VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 283
Query: 367 QRFTPH----SSDVRSVRFSPGAYYLLTAGY 393
Q + PH + V S+ FS LL AGY
Sbjct: 284 QVYQPHGDGENGPVTSIAFSVSG-RLLFAGY 313
Score = 60.1 bits (139), Expect = 3e-09
Identities = 62/235 (26%), Positives = 96/235 (40%), Gaps = 24/235 (10%)
Query: 181 VLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE-LTVHDGT 239
V + + H G +Y L W+P + + + S D +L+ +N L Q+ + +
Sbjct: 56 VCCRTLQGHTGKVYSLDWTPERNRIVSASQDG--RLIVWNA----LTSQKTHAIKLPCAW 109
Query: 240 VRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGK-----TFQALSGHSGHVLSLYNWG 294
V F + N S+ G C I+ K + L+GH G+V
Sbjct: 110 VMTCAF---SPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVP 166
Query: 295 G--AMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSG---RLLVCG 349
A ++ S D+T WD+ TG ++ G+ G L+V SG + G
Sbjct: 167 NEDAHLITSSGDQTCILWDVTTGLKTSVFG---GEFQSGHTADVLSVSISGSNPNWFISG 223
Query: 350 HDDGTCALHDVRG-SRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
D T L D R SRA++ F H DV +V+F P Y T DG L D++
Sbjct: 224 SCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIR 278
Score = 43.2 bits (97), Expect = 4e-04
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 22/190 (11%)
Query: 269 TDCIIGKTFQALSGHSGHVLSLYNWGGAM--FVSGSQDKTVRFWDLRTGGCVNIISPPAG 326
TD + +T Q GH+G V SL +W VS SQD + W+ T + I P
Sbjct: 53 TDLVCCRTLQ---GHTGKVYSL-DWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCA 108
Query: 327 QPSKGSAVASLAVDPSGRLLVCGHDDGTCALH------DVRGSRALQRF-TPHSSDVRSV 379
V + A P+G+ + CG D C++ D G+ + R T H V
Sbjct: 109 W------VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCC 162
Query: 380 RFSPGA-YYLLTAGYDGRVVLADLQGDL-TCPLPSVPVARHPDKVISARWHPDDFS-FLS 436
++ P +L+T+ D +L D+ L T + H V+S + + F+S
Sbjct: 163 QYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFIS 222
Query: 437 TSADKTAVLW 446
S D TA LW
Sbjct: 223 GSCDSTARLW 232
Score = 36.3 bits (80), Expect = 0.042
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 185 RTKH-HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDV 243
RT H H+G + + + P G TGS+D T +L T L+ + +G V +
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT-GHQLQVYQPHGDGENGPVTSI 300
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQAL----SGHSGHVLSL-YNWGGAMF 298
F + LL +G A + YV D ++G+ L H + L + G+
Sbjct: 301 AF----SVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSAL 356
Query: 299 VSGSQDKTVRFW 310
+GS D ++ W
Sbjct: 357 CTGSWDSNLKIW 368
Score = 33.1 bits (72), Expect = 0.39
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTH 222
H+ I CL S G L TGS D +K+ AF H
Sbjct: 340 HRNRISCLGLSADGSALCTGSWDSNLKIWAFGGH 373
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
V SL P +V DG + + S+ + V + FSP + G
Sbjct: 68 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 127
Query: 394 DGRVVLADLQGDLTCPLPSVPVAR----HPDKVISARWHP-DDFSFLSTSADKTAVLWTI 448
D + L +VPV+R H V ++ P +D +++S D+T +LW +
Sbjct: 128 DSVCSIFSLSSTADKD-GTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDV 186
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 64.5 bits (150), Expect = 1e-10
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 225 NLEGQEVELTV--HDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSG 282
+L G E+ T+ H GTVR + ++ +VSG + D + V D + + L G
Sbjct: 885 SLRGSELRATLKGHTGTVRAI------SSDRGKIVSG-SDDLSVIVWDKQTTQLLEELKG 937
Query: 283 HSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPS 342
H V + G ++ + D TV+ WD+RT CV + G+ S SA+ SL D S
Sbjct: 938 HDSQVSCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATV----GRCS--SAILSLEYDDS 991
Query: 343 GRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
+L D + D+R + + + H+ +RS+R L+T D + +
Sbjct: 992 TGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSV 1049
Query: 403 QGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
+C +A H V S + P D ++ SAD W
Sbjct: 1050 SRG-SC---DAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFW 1089
Score = 44.4 bits (100), Expect = 2e-04
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 11/151 (7%)
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
F+SGS D V+ WD G KG A+ +V G DD + +
Sbjct: 870 FISGSTDCLVKIWDPSLRG------SELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIV 923
Query: 358 HDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVAR 417
D + ++ L+ H S V V+ G +LTA +DG V + D++ D+ C V R
Sbjct: 924 WDKQTTQLLEELKGHDSQVSCVKMLSGE-RVLTAAHDGTVKMWDVRTDM-C---VATVGR 978
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
++S + + D A +W I
Sbjct: 979 CSSAILSLEYDDSTGILAAAGRDTVANIWDI 1009
Score = 30.7 bits (66), Expect = 2.1
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 232 ELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL- 290
+L H +R + +EDT L++G + D V G L+ H+G V S+
Sbjct: 1017 KLKGHTKWIRSIRMVEDT------LITG-SDDWTARVWSVSRGSCDAVLACHAGPVQSVE 1069
Query: 291 YNWGGAMFVSGSQDKTVRFWDLRTGG--CVNIIS 322
Y+ ++GS D +RFW+ GG CV I+
Sbjct: 1070 YSPFDKGIITGSADGLLRFWENDEGGIKCVKNIT 1103
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 64.1 bits (149), Expect = 2e-10
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 261 AGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGA-MFVSGSQDKTVRFWDLRTGGCVN 319
AGD Y D GK GHS ++ ++ + A ++GS+D T R WD +TG CV
Sbjct: 178 AGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVK 237
Query: 320 IISPPAGQPSKGS--AVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVR 377
+I G K S V+S+A+D S LVCG AL ++ S +Q P + V+
Sbjct: 238 VI----GSQDKKSRLRVSSMALDGSESWLVCGQGK-NLALWNLPASECVQTI-PIPAHVQ 291
Query: 378 SVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVP-----VARHPDKVIS 424
V F +LT G + + DL G L + P ++ HP V++
Sbjct: 292 DVMFD--EKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSISLHPAGVVA 341
Score = 29.1 bits (62), Expect = 6.3
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 1/126 (0%)
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP 383
P G S + +++VDP + D DV + F HS + +V
Sbjct: 152 PWGALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRS 211
Query: 384 GAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTA 443
A +LT DG + D + + + +V S + S+L K
Sbjct: 212 SASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSE-SWLVCGQGKNL 270
Query: 444 VLWTIP 449
LW +P
Sbjct: 271 ALWNLP 276
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 61.7 bits (143), Expect = 1e-09
Identities = 75/271 (27%), Positives = 114/271 (42%), Gaps = 35/271 (12%)
Query: 191 GSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHD--GTVRDVCFIED 248
G I+ + + DLL T S D +++L +++++T H GT R VCF
Sbjct: 25 GKIHSVGFHRTDDLLVTSSEDDSLRLFDI------ANAKQLKITYHKKHGTDR-VCF--- 74
Query: 249 TTNKTSLLVSG-----GAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGS 302
T + +SL+ S G+ Y++ + + GH V+SL + F+SGS
Sbjct: 75 THHPSSLICSSRYNLESTGESLRYLS-MYDNRILRYFKGHKDRVVSLCMSPINDSFMSGS 133
Query: 303 QDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR- 361
D++VR WDLR C I+ G+P ++A D G + + G L D R
Sbjct: 134 LDRSVRLWDLRVNACQGILH-LRGRP-------AVAYDQQGLVFAIAMEGGAVKLFDSRC 185
Query: 362 ---GSRALQRFTPHSSDVRSVRFS-PGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVAR 417
G +++V ++FS G LLT + VL +G+ C P
Sbjct: 186 YDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQG 245
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
P I A + PD LS S D T W I
Sbjct: 246 TP---IEATFTPDGKYVLSGSGDGTLHAWNI 273
Score = 33.5 bits (73), Expect = 0.29
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHAC 224
+L+ K HK + L SP D +GS D++V+L +AC
Sbjct: 106 ILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 148
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 61.7 bits (143), Expect = 1e-09
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 236 HDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV--LSLYNW 293
H G VR V F D +N+ G+ D I + D G L+GH G V L++ N
Sbjct: 169 HLGWVRSVAF--DPSNEWFCT---GSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 294 GGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
MF +G DK V+ WDL +I G V LA+ P+ +++ G D
Sbjct: 224 HTYMFSAGD-DKQVKCWDLEQN---KVIRSYHGHLH---GVYCLALHPTLDVVLTGGRDS 276
Query: 354 TCALHDVRGSRALQRFT-PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPS 412
C + D+R +Q F PH SDV SV P ++T +D + DL+ +
Sbjct: 277 VCRVWDIRTK--MQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKS----M 330
Query: 413 VPVARHPDKVISARWHPDDFSFLSTSAD 440
+ H V + HP + F+S SAD
Sbjct: 331 ATITNHKKTVRAMALHPKENDFVSASAD 358
Score = 56.8 bits (131), Expect = 3e-08
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H G + +A+ P+ + TGS D+T+K+ T L LT H G VR +
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLT-----LTGHIGQVRGLA---- 219
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGA-MFVSGSQDKTV 307
+N+ + + S G D ++ D K ++ GH V L + ++G +D
Sbjct: 220 VSNRHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVC 278
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQ 367
R WD+RT + ++ S V S+ P+ ++ G D T D+R +++
Sbjct: 279 RVWDIRTKMQIFVLP-------HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMA 331
Query: 368 RFTPHSSDVRSVRFSPGAYYLLTAGYD 394
T H VR++ P ++A D
Sbjct: 332 TITNHKKTVRAMALHPKENDFVSASAD 358
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 61.3 bits (142), Expect = 1e-09
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE-LTVHDGTVRDVCF 245
K +K I+ + + D++ATG D T L F+ + GQ + LT H V + F
Sbjct: 219 KTNKPGIFSMDILHSKDVIATGGIDTTAVL--FDRPS----GQILSTLTGHSKKVTSIKF 272
Query: 246 IEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQA---LSGHSGHVLSL-YNWGGAMFVSG 301
+ DT LV + D + + C + + L HS V ++ + FVS
Sbjct: 273 VGDTD-----LVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSA 327
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
S D T F+DL +G C+ ++ + +A A P G +L G + DV+
Sbjct: 328 SLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAA---FHPDGLILGTGTAQSIVKIWDVK 384
Query: 362 GSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
+ +F H+ ++ S+ FS Y+L TA DG V L DL+
Sbjct: 385 SQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDLR 425
Score = 39.5 bits (88), Expect = 0.004
Identities = 57/269 (21%), Positives = 102/269 (37%), Gaps = 14/269 (5%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
+L H + + + DL+ T S+DKTV++ + N + L H VR
Sbjct: 256 ILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDG-NYTSRHT-LKDHSAEVR 313
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCI-IGKTFQALSGHSGHVLSLYNWGGAMFVS 300
V TNK + S + C ++ + + + A + + ++ G + +
Sbjct: 314 AVTV--HATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGT 371
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDV 360
G+ V+ WD+++ V G+ + S++ +G L DG L D+
Sbjct: 372 GTAQSIVKIWDVKSQANVAKFGGHNGE------ITSISFSENGYFLATAALDGV-RLWDL 424
Query: 361 RGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPD 420
R + + F D SV F YL A D RV A P+ ++P
Sbjct: 425 RKLKNFRTF--DFPDANSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDLSGTG 482
Query: 421 KVISARWHPDDFSFLSTSADKTAVLWTIP 449
K S ++ D S D+ ++ +P
Sbjct: 483 KATSVKFGLDSKYIAVGSMDRNLRIFGLP 511
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 60.5 bits (140), Expect = 2e-09
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 22/272 (8%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRD 242
+K+ + H+ ++YC + +G + TGS+D+ VK+ + T C H+G + D
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALC-----LASCRGHEGDITD 352
Query: 243 VCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGA---MF 298
+ + + LV+ + D I V G L GH+G V ++ ++ A
Sbjct: 353 L-----AVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQL 407
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHD-DGTCAL 357
+S S D T R WD R + I P+ PS + ++ S ++L C ++ +GT +
Sbjct: 408 LSSSDDGTCRIWDARYSQWLPRIYVPS--PSDANTGSTSNASQSHQILCCAYNANGTIFV 465
Query: 358 HDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVAR 417
S A R S P + G++ V G P S A
Sbjct: 466 TGSSDSNA--RVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPKSSTADAL 523
Query: 418 HPDKV--ISARWHPDDFSFLSTSADKTAVLWT 447
D W D + ++ S D +A++WT
Sbjct: 524 KEDSYPKFKNSWFCHD-NIVTCSRDGSAIIWT 554
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 263 DCKIYVTDCIIGKTFQALSGH--SGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG 315
DC+I V + G L+GH S +VL ++ + + +S D WD+ G
Sbjct: 618 DCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEG 672
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 59.3 bits (137), Expect = 5e-09
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 30/274 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI-- 246
H I + WS + + +G + T+K N + N++ + T H ++RD+ F
Sbjct: 164 HDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMN--NVKANK---TAHKESIRDLSFCKT 218
Query: 247 --------EDTTNKT-SLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWGG 295
+DTT K Y+ +I F + ++GH + +W
Sbjct: 219 DLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHP 278
Query: 296 --AMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
++ VSG +D+ V+ WD R+G + V S+ + +G L+ D
Sbjct: 279 TKSLLVSGGKDQLVKLWDTRSG------RELCSLHGHKNIVLSVKWNQNGNWLLTASKDQ 332
Query: 354 TCALHDVRGSRALQRFTPHSSDVRSVRFSP-GAYYLLTAGYDGRVVLADLQGDLTCPLPS 412
L+D+R + LQ F H+ DV S+ + P Y ++ DG + + + P
Sbjct: 333 IIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHE--NPQIE 390
Query: 413 VPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
+P A H + V WHP + S S D T W
Sbjct: 391 IPNA-HDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 54.8 bits (126), Expect = 1e-07
Identities = 76/272 (27%), Positives = 109/272 (40%), Gaps = 29/272 (10%)
Query: 192 SIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTN 251
SI + W+P+G L TGS L +N + N E + L HD +R + + ++
Sbjct: 125 SINRVLWTPSGRRLITGSQSGEFTL--WNGQSFNFE---MILQAHDQPIRSMVW----SH 175
Query: 252 KTSLLVSGG-AGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFW 310
+ +VSG G K + + K + S LS F S S D TV+ W
Sbjct: 176 NENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTD-LKFCSCSDDTTVKVW 234
Query: 311 DLR--------TG----GCVNI-ISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
D TG G + I G V S+ P+ LLV G D L
Sbjct: 235 DFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKL 294
Query: 358 HDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVAR 417
D R R L H + V SV+++ +LLTA D + L D++ L S
Sbjct: 295 WDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIR--TMKELQS--FRG 350
Query: 418 HPDKVISARWHP-DDFSFLSTSADKTAVLWTI 448
H V S WHP + F+S S+D + W +
Sbjct: 351 HTKDVTSLAWHPCHEEYFVSGSSDGSICHWIV 382
Score = 38.7 bits (86), Expect = 0.008
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACN 225
H S++ LAW P G LL +GSND T K N A N
Sbjct: 395 HDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADN 431
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 59.3 bits (137), Expect = 5e-09
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 236 HDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV--LSLYNW 293
H G VR V F D +N+ G+ D I + D G L+GH V L++ N
Sbjct: 175 HLGWVRSVAF--DPSNEWFCT---GSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 294 GGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
MF +G DK V+ WDL +I G S V LA+ P+ +L+ G D
Sbjct: 230 HTYMFSAGD-DKQVKCWDLEQN---KVIRSYHGHLS---GVYCLALHPTLDVLLTGGRDS 282
Query: 354 TCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSV 413
C + D+R + + H + V SV P ++T +D + DL+ T
Sbjct: 283 VCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMST--- 339
Query: 414 PVARHPDKVISARWHPDDFSFLSTSADKT 442
+ H V + HP + +F S SAD T
Sbjct: 340 -LTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 56.4 bits (130), Expect = 4e-08
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H G + +A+ P+ + TGS D+T+K+ T L LT H VR +
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLT-----LTGHIEQVRGLA---- 225
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGH-SG-HVLSLYNWGGAMFVSGSQDKT 306
+N+ + + S G D ++ D K ++ GH SG + L+L+ + ++G +D
Sbjct: 226 VSNRHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVL-LTGGRDSV 283
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
R WD+RT + +S + V S+ P+ +V G D T D+R + +
Sbjct: 284 CRVWDIRTKMQIFALS------GHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTM 337
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYD 394
T H VR++ P +A D
Sbjct: 338 STLTHHKKSVRAMTLHPKENAFASASAD 365
Score = 52.8 bits (121), Expect = 5e-07
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 185 RTKH-HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDV 243
R+ H H +YCLA P D+L TG D ++ T + Q L+ HD TV V
Sbjct: 254 RSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT-----KMQIFALSGHDNTVCSV 308
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGH--SGHVLSLYNWGGAMFVSG 301
T T V G+ D I D GKT L+ H S ++L+ A F S
Sbjct: 309 -----FTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA-FASA 362
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
S D T +F + C N++S + + + ++AV+ G ++V G D+G+ D +
Sbjct: 363 SADNTKKFSLPKGEFCHNMLS------QQKTIINAMAVNEDG-VMVTGGDNGSIWFWDWK 415
Query: 362 GSRALQR 368
+ Q+
Sbjct: 416 SGHSFQQ 422
Score = 30.3 bits (65), Expect = 2.7
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 20/132 (15%)
Query: 188 HHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
HHK S+ + P + A+ S D T K C+ + T+ + +
Sbjct: 342 HHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCH------NMLSQQKTIINAMAV- 394
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQ---------ALSGHSGHVLSLYNWGGAMF 298
N+ ++V+GG I+ D G +FQ +L +G + Y+ G+
Sbjct: 395 ---NEDGVMVTGGDNG-SIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRL 450
Query: 299 VSGSQDKTVRFW 310
V+ DKT++ W
Sbjct: 451 VTCEADKTIKMW 462
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 58.8 bits (136), Expect = 7e-09
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 205 LATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDC 264
+AT S D+T+++ + + E L H V + +I T + G+ D
Sbjct: 34 IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDT 93
Query: 265 KIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPP 324
++V + + G+ Q L GH V + VS S D+T++ W R G V S
Sbjct: 94 FVFVWNLMNGENIQTLKGHQMQVTGV-AIDNEDIVSSSVDQTLKRW--RNGQLVE--SWD 148
Query: 325 AGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPG 384
A Q S AV L PSG LV G D + L +G +LQ + H+ VR + P
Sbjct: 149 AHQ-SPIQAVIRL---PSGE-LVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPD 201
Query: 385 AYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAV 444
+ L+A +DG + L L G++ + + H V S H +S S D+ A
Sbjct: 202 LGF-LSASHDGSIRLWALSGEVL-----LEMVGHTSLVYSVDAHSSGL-IVSASEDRHAK 254
Query: 445 LW 446
+W
Sbjct: 255 IW 256
Score = 29.5 bits (63), Expect = 4.8
Identities = 55/224 (24%), Positives = 86/224 (38%), Gaps = 27/224 (12%)
Query: 232 ELTVHDGTVRDVCFIED------TTNKTSLLVSGGAGDCKIYVTD-CIIGKTFQALSGHS 284
EL HD VR +C D + ++T + S D + Y ++ ++G T + G
Sbjct: 15 ELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHT--SFVGPL 72
Query: 285 GHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGR 344
+ + VSGS D V W+L G NI Q KG + V
Sbjct: 73 AWIPPTDEYPEGRLVSGSMDTFVFVWNLMNG--ENI------QTLKGHQMQVTGVAIDNE 124
Query: 345 LLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQG 404
+V D T L R + ++ + H S +++V P L++ D + L +
Sbjct: 125 DIVSSSVDQT--LKRWRNGQLVESWDAHQSPIQAVIRLPSG-ELVSGSSDASLKLWKGKT 181
Query: 405 DLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
L ++ H D V P D FLS S D + LW +
Sbjct: 182 SLQ------TLSGHTDTVRGLAVMP-DLGFLSASHDGSIRLWAL 218
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 58.8 bits (136), Expect = 7e-09
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 205 LATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDC 264
+AT S D+T+++ + + E L H V + +I T + G+ D
Sbjct: 34 IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDT 93
Query: 265 KIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPP 324
++V + + G+ Q L GH V + VS S D+T++ W R G V S
Sbjct: 94 FVFVWNLMNGENIQTLKGHQMQVTGV-AIDNEDIVSSSVDQTLKRW--RNGQLVE--SWD 148
Query: 325 AGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPG 384
A Q S AV L PSG LV G D + L +G +LQ + H+ VR + P
Sbjct: 149 AHQ-SPIQAVIRL---PSGE-LVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPD 201
Query: 385 AYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAV 444
+ L+A +DG + L L G++ + + H V S H +S S D+ A
Sbjct: 202 LGF-LSASHDGSIRLWALSGEVL-----LEMVGHTSLVYSVDAHSSGL-IVSASEDRHAK 254
Query: 445 LW 446
+W
Sbjct: 255 IW 256
Score = 29.5 bits (63), Expect = 4.8
Identities = 55/224 (24%), Positives = 86/224 (38%), Gaps = 27/224 (12%)
Query: 232 ELTVHDGTVRDVCFIED------TTNKTSLLVSGGAGDCKIYVTD-CIIGKTFQALSGHS 284
EL HD VR +C D + ++T + S D + Y ++ ++G T + G
Sbjct: 15 ELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHT--SFVGPL 72
Query: 285 GHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGR 344
+ + VSGS D V W+L G NI Q KG + V
Sbjct: 73 AWIPPTDEYPEGRLVSGSMDTFVFVWNLMNG--ENI------QTLKGHQMQVTGVAIDNE 124
Query: 345 LLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQG 404
+V D T L R + ++ + H S +++V P L++ D + L +
Sbjct: 125 DIVSSSVDQT--LKRWRNGQLVESWDAHQSPIQAVIRLPSG-ELVSGSSDASLKLWKGKT 181
Query: 405 DLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
L ++ H D V P D FLS S D + LW +
Sbjct: 182 SLQ------TLSGHTDTVRGLAVMP-DLGFLSASHDGSIRLWAL 218
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 58.0 bits (134), Expect = 1e-08
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 8/201 (3%)
Query: 203 DLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAG 262
D++ T S DK++ L + + LT H V DV D S G+
Sbjct: 29 DIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALS-----GSW 83
Query: 263 DCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNII 321
D ++ + D G+T + GH+ VLS+ ++ VS S+D+T++ W+ G C I
Sbjct: 84 DGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTI 142
Query: 322 SPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRF 381
S G S V + + +V D T + +++ + HS + +V
Sbjct: 143 SEGDGHKEWVSCV-RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAV 201
Query: 382 SPGAYYLLTAGYDGRVVLADL 402
SP + G DG ++L DL
Sbjct: 202 SPDGSLCASGGKDGVILLWDL 222
Score = 46.8 bits (106), Expect = 3e-05
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ V+ S+DK++ W L T + V + + G+ + G DG
Sbjct: 30 IIVTASRDKSIILWKL-TKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVA 416
L D+ +RF H+ DV SV FS +++A D + L + G+ C
Sbjct: 89 LWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE--CKYTISEGD 146
Query: 417 RHPDKVISARWHPDDF--SFLSTSADKTAVLWTI 448
H + V R+ P+ + +S S DKT +W +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Score = 41.9 bits (94), Expect = 8e-04
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALH 358
VS S DKTV+ W+L+ N + +G + ++AV P G L G DG L
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNSLVGHSGY------LNTVAVSPDGSLCASGGKDGVILLW 220
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
D+ + L S + S+ FSP Y+L A
Sbjct: 221 DLAEGKKLYSLEA-GSIIHSLCFSPNRYWLCAA 252
Score = 41.1 bits (92), Expect = 0.001
Identities = 51/189 (26%), Positives = 73/189 (38%), Gaps = 15/189 (7%)
Query: 265 KIYVTDCIIGKTFQALSGHSGHVLSLY-NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISP 323
K+ D G + L+GHS V + + G +SGS D +R WDL TG
Sbjct: 44 KLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRF-- 101
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG--SRALQRFTPHSSDVRSVRF 381
G V S+A R +V D T L + G + H V VRF
Sbjct: 102 -VGHTKD---VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRF 157
Query: 382 SPGAYY--LLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSA 439
SP +++A +D V + +LQ C L + V H + + PD S
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQ---NCKLRNSLVG-HSGYLNTVAVSPDGSLCASGGK 213
Query: 440 DKTAVLWTI 448
D +LW +
Sbjct: 214 DGVILLWDL 222
Score = 37.9 bits (84), Expect = 0.014
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 184 KRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDV 243
+R H + +A+S + + S D+T+KL +NT L + ++ DG V
Sbjct: 99 RRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL--WNT----LGECKYTISEGDGHKEWV 152
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGS 302
+ + N + + D + V + K +L GHSG++ ++ + G++ SG
Sbjct: 153 SCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGG 212
Query: 303 QDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG 362
+D + WDL G + S A GS + SL P+ R +C + + + D+
Sbjct: 213 KDGVILLWDLAEG--KKLYSLEA-----GSIIHSLCFSPN-RYWLCAATENSIRIWDLES 264
Query: 363 SRALQ 367
++
Sbjct: 265 KSVVE 269
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 57.6 bits (133), Expect = 2e-08
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 280 LSGHS--GHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASL 337
L GH G+ L+ ++ +SGSQD+ + WD+ +++P S + +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 338 AVD-PSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP-GAYYLLTAGYDG 395
A + + DD + D+R ++ + H ++ + F+P + L TA D
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDS 284
Query: 396 RVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSA-DKTAVLWTI 448
V L DL+ LT PL +++H +V W P+ + L++S D+ ++W I
Sbjct: 285 TVALFDLR-KLTAPLH--VLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDI 335
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 280 LSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLA 338
L+ HS V ++ + FVS S D T F+DL +G C+ +S SK + A
Sbjct: 305 LNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVS----DDSKNVDYTAAA 360
Query: 339 VDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVV 398
P G +L G + DV+ + +F H+ +V ++ FS Y+L TA DG V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VR 419
Query: 399 LADLQ 403
L DL+
Sbjct: 420 LWDLR 424
Score = 43.6 bits (98), Expect = 3e-04
Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 23/221 (10%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLM---AFNTHACNLEGQEVELTVHDG 238
+L H + + + DL+ T S DKTV++ +AC + V
Sbjct: 256 ILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAV 315
Query: 239 TVRDV--CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGA 296
TV F+ + + T +G C V+D + A + H G
Sbjct: 316 TVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPD---------GL 366
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ +G+ V+ WD+++ V G+ V +++ +G L +DG
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGE------VTAISFSENGYFLATAAEDGV-R 419
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
L D+R R + F S+D SV F P YL A D +V
Sbjct: 420 LWDLRKLRNFKSFL--SADANSVEFDPSGSYLGIAASDIKV 458
Score = 37.9 bits (84), Expect = 0.014
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
+ S+ + S ++ G D T L D + L T HS V SV+F + +LTA
Sbjct: 225 ICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASA 284
Query: 394 DGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKT 442
D V + GD + H +V + HP + F+S S D T
Sbjct: 285 DKTVRIWRNPGDGNYAC-GYTLNDHSAEVRAVTVHPTNKYFVSASLDGT 332
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 388 LLTAGYDGRVVLADL-QGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
+ T G D VL D G + L H KV S ++ D L+ SADKT +W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTG-----HSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 447 TIP 449
P
Sbjct: 292 RNP 294
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 280 LSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLA 338
L+ HS V ++ + FVS S D T F+DL +G C+ +S SK + A
Sbjct: 305 LNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVS----DDSKNVDYTAAA 360
Query: 339 VDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVV 398
P G +L G + DV+ + +F H+ +V ++ FS Y+L TA DG V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VR 419
Query: 399 LADLQ 403
L DL+
Sbjct: 420 LWDLR 424
Score = 43.6 bits (98), Expect = 3e-04
Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 23/221 (10%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLM---AFNTHACNLEGQEVELTVHDG 238
+L H + + + DL+ T S DKTV++ +AC + V
Sbjct: 256 ILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAV 315
Query: 239 TVRDV--CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGA 296
TV F+ + + T +G C V+D + A + H G
Sbjct: 316 TVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPD---------GL 366
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ +G+ V+ WD+++ V G+ V +++ +G L +DG
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGE------VTAISFSENGYFLATAAEDGV-R 419
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
L D+R R + F S+D SV F P YL A D +V
Sbjct: 420 LWDLRKLRNFKSFL--SADANSVEFDPSGSYLGIAASDIKV 458
Score = 37.9 bits (84), Expect = 0.014
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
+ S+ + S ++ G D T L D + L T HS V SV+F + +LTA
Sbjct: 225 ICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASA 284
Query: 394 DGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKT 442
D V + GD + H +V + HP + F+S S D T
Sbjct: 285 DKTVRIWRNPGDGNYAC-GYTLNDHSAEVRAVTVHPTNKYFVSASLDGT 332
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 388 LLTAGYDGRVVLADL-QGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
+ T G D VL D G + L H KV S ++ D L+ SADKT +W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTG-----HSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 447 TIP 449
P
Sbjct: 292 RNP 294
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 57.2 bits (132), Expect = 2e-08
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 199 SPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVS 258
S A L+A G D ++++ C EV H G V + + NK +++
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTC-----EVNFNSHKGAVTALRY-----NKVGSMLA 122
Query: 259 GGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGC 317
G+ D I + D + L GH V L + GG VS S+DK +R WDL T C
Sbjct: 123 SGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC 182
Query: 318 VNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
+ I+S S V S+ DP R +V G D + V+
Sbjct: 183 MQIVS------GHHSEVWSVDTDPEERYVVTGSADQELRFYAVK 220
Score = 47.6 bits (108), Expect = 2e-05
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 291 YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGH 350
Y+ G ++ + +K V W +R G C ++P + + AV S+A S L+ G+
Sbjct: 26 YDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASS-LVAVGY 83
Query: 351 DDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPL 410
DG+ + D F H V ++R++ L + D ++L D+ G+
Sbjct: 84 ADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGL-- 141
Query: 411 PSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ H D+V + +S+S DK +W +
Sbjct: 142 --FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL 177
Score = 47.2 bits (107), Expect = 2e-05
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 267 YVTDCIIGKTFQALSGHSGH---VLSLYNWGGAMFVSGSQDKTVRFWDLRTGGC-VNIIS 322
+V + KT S G V S+ + ++ G D ++R WD G C VN S
Sbjct: 45 HVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNS 104
Query: 323 PPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFS 382
KG AV +L + G +L G D L DV G L R H V + F
Sbjct: 105 ------HKG-AVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFL 157
Query: 383 PGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADK 441
G L+++ D + + DL+ + V+ H +V S P++ ++ SAD+
Sbjct: 158 DGGKKLVSSSKDKFLRVWDLETQHCMQI----VSGHHSEVWSVDTDPEERYVVTGSADQ 212
Score = 43.2 bits (97), Expect = 4e-04
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HK + C+ S G+L+ TGS DK +K+ + C+ + H +V V F+ +
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCH-----KSIFAHGDSVMGVKFVRN 635
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV--LSLYNWGGAMFVSGSQDKT 306
T L S G D + D + L GH + L++ N G V+GS D++
Sbjct: 636 ----THYLFSIGK-DRLVKYWDADKFEHLLTLEGHHAEIWCLAISN-RGDFLVTGSHDRS 689
Query: 307 VRFWD 311
+R WD
Sbjct: 690 MRRWD 694
Score = 37.1 bits (82), Expect = 0.024
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR- 241
++ K H G+I+ + P T S D VK + + + + +LTV +
Sbjct: 480 VEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATK-KLTVSNVKSMK 538
Query: 242 ---DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAM 297
DV + + + + V+ K++ D + K + +L GH V+ + + G +
Sbjct: 539 MNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSL--KFYLSLYGHKLPVMCIDISSDGEL 596
Query: 298 FVSGSQDKTVRFWDLRTGGC 317
V+GSQDK ++ W L G C
Sbjct: 597 IVTGSQDKNLKIWGLDFGDC 616
Score = 35.1 bits (77), Expect = 0.097
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HKG++ L ++ G +LA+GS D + L E L H V D+ F++
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVG-----ESGLFRLRGHRDQVTDLVFLDG 159
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMF-VSGSQDKTV 307
LVS + D + V D Q +SGH V S+ + V+GS D+ +
Sbjct: 160 GKK----LVS-SSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQEL 214
Query: 308 RFWDLR 313
RF+ ++
Sbjct: 215 RFYAVK 220
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 8/122 (6%)
Query: 282 GHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP 341
GH V S+ + + V+ W+ TG C+ I G + SL V P
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSEVKIWNPSTGSCLRTI-------DSGYGLCSLIV-P 455
Query: 342 SGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLAD 401
+ + G G + D+ + ++ H + S+ P +T D V +
Sbjct: 456 QNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWE 515
Query: 402 LQ 403
Q
Sbjct: 516 YQ 517
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 56.8 bits (131), Expect = 3e-08
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL- 357
+SG Q+ +R WDLR C + P G P + SL V G ++V +D GTC +
Sbjct: 141 ISGDQNGNIRVWDLRADLCSCELVPEVGTP-----IRSLTVMWDGTMVVAANDRGTCYVW 195
Query: 358 HDVRGSRALQRFTP------HSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLP 411
+ + + F P H+S + SPG YL TA D V + +L G L
Sbjct: 196 RSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDG---FKLE 252
Query: 412 SVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
V + H V + D ++ S+D TA LW++
Sbjct: 253 KV-LTGHERWVWDCDFSMDGEYLVTASSDTTARLWSM 288
Score = 41.1 bits (92), Expect = 0.001
Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 20/249 (8%)
Query: 205 LATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDC 264
LAT S+D+T++L T C + +L V+ +E T K L+ +
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNR--------LELTPEKGKLVAACNPHIR 64
Query: 265 KIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISP 323
+ + H+ +V+++ + + G M SGS+D +V+ WDLR C
Sbjct: 65 LFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQR---- 120
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPH-SSDVRSVRFS 382
+ S V ++ + P+ L+ G +G + D+R P + +RS+
Sbjct: 121 ---EFRSVSPVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVM 177
Query: 383 PGAYYLLTAGYDGR-VVLADL--QGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSA 439
++ A G V L + +T P + H ++ P + + S+
Sbjct: 178 WDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASS 237
Query: 440 DKTAVLWTI 448
DKT +W +
Sbjct: 238 DKTVKIWNL 246
Score = 32.3 bits (70), Expect = 0.68
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE--LTVHDGT 239
L K H+ + CL SP LAT S+DKTVK+ NL+G ++E LT H+
Sbjct: 210 LHKLQAHNSHILKCLL-SPGNKYLATASSDKTVKIW-------NLDGFKLEKVLTGHERW 261
Query: 240 VRDVCFIED 248
V D F D
Sbjct: 262 VWDCDFSMD 270
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTG 315
K + L+GH V ++ G V+ S D T R W +R G
Sbjct: 250 KLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAG 291
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 56.4 bits (130), Expect = 4e-08
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALH 358
+SG Q+ +R WDLR C + P +AV SL V G ++V ++ GTC +
Sbjct: 135 ISGDQNGNIRVWDLRANSCSCELVPEVD-----TAVRSLTVMWDGTMVVAANNRGTCYVW 189
Query: 359 DV-RGSRALQRFTP------HSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLP 411
+ RG + + F P H+ + SP YL TA D V + ++ G L
Sbjct: 190 RLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDG---FKLE 246
Query: 412 SVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTIP 449
V + H V + D ++ S+D TA LW++P
Sbjct: 247 KV-LTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMP 283
Score = 45.6 bits (103), Expect = 7e-05
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 283 HSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP 341
H+ +V+++ + SGS+D TV+ WDLR GC + +AV ++ + P
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQK-------EYESVAAVNTVVLHP 129
Query: 342 SGRLLVCGHDDGTCALHDVRGSRALQRFTPH-SSDVRSVRFSPGAYYLLTAGYDGR-VVL 399
+ L+ G +G + D+R + P + VRS+ ++ A G V
Sbjct: 130 NQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVW 189
Query: 400 ADLQGDLTCP--LPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
L+G T P + H ++ P + + S+DKT +W +
Sbjct: 190 RLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV 240
Score = 39.9 bits (89), Expect = 0.003
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ + S D T+RFW+ TG C I P S V L + P L +
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYP------DSHVNRLEITPDKHYLAAACNP-HIR 59
Query: 357 LHDVRGS--RALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
L DV + + + + H+++V +V F A ++ + DG V + DL+
Sbjct: 60 LFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
Score = 34.3 bits (75), Expect = 0.17
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE--LTVHDGTV 240
L + + H G I SPA LAT S+DKTVK+ N++G ++E LT H V
Sbjct: 204 LHKLQAHNGHILKCLLSPANKYLATASSDKTVKIW-------NVDGFKLEKVLTGHQRWV 256
Query: 241 RDVCFIED 248
D F D
Sbjct: 257 WDCVFSVD 264
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 56.4 bits (130), Expect = 4e-08
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 8/201 (3%)
Query: 203 DLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAG 262
D++ T S DK++ L + + +T H V+DV D G+
Sbjct: 29 DVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSD-----GQFALSGSW 83
Query: 263 DCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNII 321
D ++ + D G++ + GH+ VLS+ ++ VS S+D+T++ W+ G C I
Sbjct: 84 DGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTI 142
Query: 322 SPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRF 381
S G S V + + +V D T + +++ + HS + +V
Sbjct: 143 SEADGHKEWVSCV-RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAV 201
Query: 382 SPGAYYLLTAGYDGRVVLADL 402
SP + G DG ++L DL
Sbjct: 202 SPDGSLCASGGKDGVILLWDL 222
Score = 48.8 bits (111), Expect = 7e-06
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 5/154 (3%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ V+ S+DK++ W L T + V + + G+ + G DG
Sbjct: 30 VIVTSSRDKSIILWKL-TKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELR 88
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVA 416
L D+ + +RF H+ DV SV FS +++A D + L + G+ C
Sbjct: 89 LWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE--CKYTISEAD 146
Query: 417 RHPDKVISARWHPDDF--SFLSTSADKTAVLWTI 448
H + V R+ P+ + +S S DKT +W +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Score = 45.6 bits (103), Expect = 7e-05
Identities = 56/230 (24%), Positives = 91/230 (39%), Gaps = 18/230 (7%)
Query: 165 ESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHAC 224
+SI L++ + V +R H + + S G +GS D ++L T
Sbjct: 38 KSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAT--- 94
Query: 225 NLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHS 284
G+ V G +DV + +T+ ++ + K++ T T GH
Sbjct: 95 ---GESTRRFV--GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHK 149
Query: 285 GHVLSLY---NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP 341
V + N VS S DKTV+ W+L+ N ++ +G + ++AV P
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGY------LNTVAVSP 203
Query: 342 SGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
G L G DG L D+ + L S + S+ FSP Y+L A
Sbjct: 204 DGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFSPNRYWLCAA 252
Score = 42.7 bits (96), Expect = 5e-04
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 15/189 (7%)
Query: 265 KIYVTDCIIGKTFQALSGHSGHVLSLY-NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISP 323
K+ D G + ++GHS V + + G +SGS D +R WDL TG
Sbjct: 44 KLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRF-- 101
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG--SRALQRFTPHSSDVRSVRF 381
G V S+A R +V D T L + G + H V VRF
Sbjct: 102 -VGHTKD---VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRF 157
Query: 382 SPGAYY--LLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSA 439
SP +++A +D V + +LQ C L + +A H + + PD S
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQ---NCKLRNT-LAGHSGYLNTVAVSPDGSLCASGGK 213
Query: 440 DKTAVLWTI 448
D +LW +
Sbjct: 214 DGVILLWDL 222
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 56.0 bits (129), Expect = 5e-08
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRD 242
+KR + H+ ++YC +G + TGS+D+ VK+ + +T C H+G + D
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYC-----LASCRGHEGDITD 292
Query: 243 VCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV--LSLYNWGGAMF-- 298
+ + ++ ++ + DC I V G L GH+G V ++ G+ +
Sbjct: 293 L-----AVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQL 347
Query: 299 VSGSQDKTVRFWDLRTGG-CVNIISP-PAGQPSKGSAVASLAVDPSGRLLVC 348
+S S D T R WD R I P P K S +S S ++ C
Sbjct: 348 LSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCC 399
Score = 40.3 bits (90), Expect = 0.003
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 10/150 (6%)
Query: 275 KTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSA 333
+ + L GH V ++ + G ++GS D+ V+ W + T C+ G
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGD------ 289
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP---GAYYLLT 390
+ LAV + + +D + + + H+ V ++ FSP Y LL+
Sbjct: 290 ITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLS 349
Query: 391 AGYDGRVVLADLQGDLTCPLPSVPVARHPD 420
+ DG + D +G P VP PD
Sbjct: 350 SSDDGTCRIWDARGAQFAPRIYVPRPPSPD 379
Score = 40.3 bits (90), Expect = 0.003
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Query: 251 NKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFV-SGSQDKTVRF 309
+++ V G+ D + V + GH G + L +F+ S S D +R
Sbjct: 254 DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRV 313
Query: 310 WDLRTGGCVNIISPPAGQPSKGSAVASLAVDP---SGRLLVCGHDDGTCALHDVRGSRAL 366
W L G V+++ G AV ++A P S L+ DDGTC + D RG++
Sbjct: 314 WRLPDGLPVSVLRGHTG------AVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFA 367
Query: 367 QR 368
R
Sbjct: 368 PR 369
Score = 30.7 bits (66), Expect = 2.1
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 332 SAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
+AV +D SGR ++ G DD + + + L H D+ + S ++ +A
Sbjct: 246 NAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASA 305
Query: 392 GYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHP---DDFSFLSTSADKTAVLW 446
D + + L LP + H V + + P + LS+S D T +W
Sbjct: 306 SNDCVIRVWRLPDG----LPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 55.6 bits (128), Expect = 6e-08
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 16/240 (6%)
Query: 166 SINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACN 225
SI++ S T P +L+ HH+ + LA S LLA+GS D VKL F +
Sbjct: 41 SISVHDGLSTSTLPPTILR---HHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEF- 96
Query: 226 LEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSG 285
+ +T +R + F N + L++ D I + + G + L GH G
Sbjct: 97 ----QTNITRFTLPIRVLAF-----NGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKG 147
Query: 286 HVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASL-AVDPSG 343
V L ++ G + S TV W+L+ G + A +++ ++ P G
Sbjct: 148 PVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDG 207
Query: 344 RLLVCGHDDGTCALHD-VRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
R L ++D G + H + + ++P Y+ T+G D +V+L D+
Sbjct: 208 RTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDV 267
Score = 32.3 bits (70), Expect = 0.68
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 20/208 (9%)
Query: 250 TNKTSLLVSGGAGDC-KIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVR 308
+N ++LL SG C K+Y +T VL+ +N G++ + D+ ++
Sbjct: 71 SNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLA-FNGSGSLLAAAGDDEGIK 129
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG---SRA 365
+ G V ++ G V L P+G LL GT +++ S
Sbjct: 130 LINTFDGSIVRVLKGHKGP------VTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFT 183
Query: 366 LQRFTP----HSSDVRSVRFSPGAYYLLTAGYDGRVVLAD-LQGDLTCPLPSVPVARHPD 420
L+ P ++S V R+SP L G VV+ D G+ L H +
Sbjct: 184 LKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRG----DHLE 239
Query: 421 KVISARWHPDDFSFLSTSADKTAVLWTI 448
+ W P+ ++ DK +LW +
Sbjct: 240 AICYLTWAPNGKYIATSGLDKQVLLWDV 267
Score = 29.9 bits (64), Expect = 3.6
Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 12/186 (6%)
Query: 251 NKTSLLVSGGAGDCKIYVTDCIIGKTFQA--LSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
+K V+ + D I V D + T L H V SL + + SGS D V
Sbjct: 27 HKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCV 86
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQ 367
+ + +G I+ + LA + SG LL DD L + ++
Sbjct: 87 KLYKFPSGEFQTNITRFT------LPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVR 140
Query: 368 RFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ-GDLTCPLPSV-PVARHPDKVIS- 424
H V + F P L + G V+ +LQ G ++ L V P +++
Sbjct: 141 VLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNI 200
Query: 425 ARWHPD 430
RW PD
Sbjct: 201 PRWSPD 206
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 55.2 bits (127), Expect = 8e-08
Identities = 69/272 (25%), Positives = 112/272 (41%), Gaps = 45/272 (16%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVEL--TVHDGTVRDVCFIEDTT 250
I+ + +S G + GS+D ++ + +LE V L H V VCF +++
Sbjct: 232 IFSVKFSTDGREVVAGSSDDSI-------YVYDLEANRVSLRTVAHTSDVNTVCFADESG 284
Query: 251 NKTSLLVSGGAGD-CKIYVTDCIIGKTFQA--LSGHSGHVLSLYNWG-GAMFVSGSQDKT 306
N L++SG + CK++ C IG+ A L GH V + + G G F+S +D+T
Sbjct: 285 N---LILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQT 341
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG--SR 364
++ WD+R + P++ + + D D D++ +
Sbjct: 342 IKLWDIR--------KMSSSAPARHEVLRNYEWDYRWM-------DYPTEARDLKHPLDQ 386
Query: 365 ALQRFTPHSSDVRSVR--FSP----GAYYLLTAGYDGRVVLADL-QGDLTCPLPSVPVAR 417
++ + HS +R FSP G Y+ T D V + DL GD L
Sbjct: 387 SVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVL-----KH 441
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTIP 449
H V WHP + +S+S D V W P
Sbjct: 442 HSSPVRDCNWHPYYPTLISSSWDGDLVKWEFP 473
Score = 43.2 bits (97), Expect = 4e-04
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 300 SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHD 359
SGS + ++ G ++ S G S G + S+ GR +V G D + ++D
Sbjct: 202 SGSTESHANVTEIHDG--LDFSSDEDGGYSFG--IFSVKFSTDGREVVAGSSDDSIYVYD 257
Query: 360 VRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVV-LADLQGDLTCPLPSVPVARH 418
+ +R R H+SDV +V F+ + L+ +G D + + D + + P+ + H
Sbjct: 258 LEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGH 317
Query: 419 PDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ V D F+S D+T LW I
Sbjct: 318 LEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 344 RLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
+ + G +D + ++D+ + HSS VR + P L+++ +DG +V +
Sbjct: 414 KYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFP 473
Query: 404 GDLTCPLPS 412
G P+ S
Sbjct: 474 GSGEAPIMS 482
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 54.8 bits (126), Expect = 1e-07
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 13/220 (5%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HK ++ +AW+ G LA+GS D+T ++ H + + +++EL H +V +C+
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHG-HSKAKDLELKGHTDSVDQLCW--- 74
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVR 308
K S LV+ +GD + + D GK Q + ++ Y G G++D +
Sbjct: 75 -DPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELT 133
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQR 368
D+R P + V +A + G GT + + L
Sbjct: 134 ILDVRK-------FKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDT 186
Query: 369 FTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTC 408
T H++ + P Y D V L D+ D+ C
Sbjct: 187 LTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDI-SDMLC 225
Score = 53.2 bits (122), Expect = 3e-07
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 32/225 (14%)
Query: 187 KHHKGSIYCLAWSPA-GDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCF 245
K H S+ L W P DL+AT S DK+V+L + C Q+VEL+ G ++ +
Sbjct: 63 KGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCT---QQVELS---GENINITY 116
Query: 246 IEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHS-GHVLSLYNWGGAMFVSGSQD 304
D T+ V+ G D ++ + D + F+ L + ++ W + G
Sbjct: 117 KPDGTH-----VAVGNRDDELTILDV---RKFKPLHRRKFNYEVNEIAWN----MPGD-- 162
Query: 305 KTVRFWDLRTG-GCVNIISPPAGQP-----SKGSAVASLAVDPSGRLLVCGHDDGTCALH 358
F+ L TG G V ++S P+ +P + + +A+DP GR G D +L
Sbjct: 163 ----FFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLW 218
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
D+ L+ FT VR++ F+ Y+ +A D + +A++Q
Sbjct: 219 DISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANVQ 263
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTIPP 450
H KV S W+ + S S D+TA +W I P
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEP 51
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 54.4 bits (125), Expect = 1e-07
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCF- 245
K HK + +AWSP G L +GS K+ ++ +N LEG LT H + + +
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGS--KSGEICCWNPKKGELEGSP--LTGHKKWITGISWE 203
Query: 246 -IEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGG-AMFVSGSQ 303
+ ++ + S GD +I+ D + K+ LSGH+ V + WGG + +GSQ
Sbjct: 204 PVHLSSPCRRFVTSSKDGDARIW--DITLKKSIICLSGHTLAVTCV-KWGGDGIIYTGSQ 260
Query: 304 DKTVRFWDLRTG 315
D T++ W+ G
Sbjct: 261 DCTIKMWETTQG 272
Score = 47.2 bits (107), Expect = 2e-05
Identities = 52/194 (26%), Positives = 75/194 (38%), Gaps = 17/194 (8%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG 315
++ G+ DC I + + GK + L GH + SL + +G+ D T R +
Sbjct: 254 IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQY----- 308
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSR-ALQRFTPHSS 374
PP + K + S LV G DD T L + S+ +R T H
Sbjct: 309 -------PPNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQ 361
Query: 375 DVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSF 434
V V FSP ++ +A +D V L +T +V H V W D
Sbjct: 362 LVNHVYFSPDGKWIASASFDKSV---RLWNGITGQFVTV-FRGHVGPVYQVSWSADSRLL 417
Query: 435 LSTSADKTAVLWTI 448
LS S D T +W I
Sbjct: 418 LSGSKDSTLKIWEI 431
Score = 46.8 bits (106), Expect = 3e-05
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 256 LVSGGAGDCKIYVTDCIIGKT-FQALSGHSGHVLSLY-NWGGAMFVSGSQDKTVRFWDLR 313
LVSG + D +++ + + K + L+GH V +Y + G S S DK+VR W+
Sbjct: 332 LVSG-SDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGI 390
Query: 314 TGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHS 373
TG V + G V ++ RLL+ G D T + ++R + Q H+
Sbjct: 391 TGQFVTVFRGHVGP------VYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHA 444
Query: 374 SDVRSVRFSPGAYYLLTAGYD 394
+V +V +SP +++ G D
Sbjct: 445 DEVFAVDWSPDGEKVVSGGKD 465
Score = 42.7 bits (96), Expect = 5e-04
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 18/181 (9%)
Query: 273 IGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKG 331
+ + Q ++GH+ VL + ++ G SGS D TVR WDL T +P
Sbjct: 98 VNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTE------TPLFTCKGHK 151
Query: 332 SAVASLAVDPSGRLLVCGHDDG-TCALHDVRGSRALQRFTPHSSDVRSVRFSP-----GA 385
+ V ++A P G+ LV G G C + +G T H + + + P
Sbjct: 152 NWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPC 211
Query: 386 YYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVL 445
+T+ DG + D+T + ++ H V +W D + + S D T +
Sbjct: 212 RRFVTSSKDGDARI----WDITLKKSIICLSGHTLAVTCVKWGGDGIIY-TGSQDCTIKM 266
Query: 446 W 446
W
Sbjct: 267 W 267
Score = 40.7 bits (91), Expect = 0.002
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 184 KRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDV 243
KR H+ + + +SP G +A+ S DK+V+L +N + GQ V TV G V V
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL--WN----GITGQFV--TVFRGHVGPV 405
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWG--GAMFVSG 301
+ + + S L+ G+ D + + + K Q L GH+ V ++ +W G VSG
Sbjct: 406 --YQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV-DWSPDGEKVVSG 462
Query: 302 SQDKTVRFW 310
+D+ ++ W
Sbjct: 463 GKDRVLKLW 471
Score = 33.9 bits (74), Expect = 0.22
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 11/149 (7%)
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALH 358
VSGS D T+ W+ P V + P G+ + D + L
Sbjct: 333 VSGSDDFTMFLWEPSVSK-----QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW 387
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD-LTCPLPSVPVAR 417
+ + + F H V V +S + LL+ D + + +++ L LP
Sbjct: 388 NGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPG----- 442
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLW 446
H D+V + W PD +S D+ LW
Sbjct: 443 HADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 32.7 bits (71), Expect = 0.51
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKL 216
H ++ C+++SP G LA+GS D TV+L
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRL 135
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 35 TVLEDLQAVRCAEFHPNGKLYAVGSNTKTLRI 66
T+ +AV C F P+GK A GS T+R+
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRL 135
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 54.0 bits (124), Expect = 2e-07
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 274 GKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG-GCVNIISPPAGQPSKGS 332
G+ +L GH+ V S+ + S S D +VR WD+ TG +N+ G
Sbjct: 262 GEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFC--------GK 313
Query: 333 AVASLAV-DPSGRLLVCGHDDGTCALHDVR--GSRA-LQRFTPHSSDVRSVRFSPGA-YY 387
A+ ++ V S L+ G D + D R G+ A + +F+ HSS + + ++ + ++
Sbjct: 314 ALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFH 373
Query: 388 LLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSAD 440
LL+A YDG+++L DL+ PL SV + H DKV+SA W + S +S AD
Sbjct: 374 LLSASYDGKIMLWDLR--TAWPL-SV-IDTHNDKVLSADWWKGE-SVVSGGAD 421
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 54.0 bits (124), Expect = 2e-07
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 280 LSGHS--GHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASL 337
L GH G+ LS + +SGSQD+ + WD+ +++ SA+A +
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 338 AVD-PSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP-GAYYLLTAGYDG 395
+ + L +DG + D R ++ + H +V + F+P + L TA D
Sbjct: 224 SWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDS 283
Query: 396 RVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSA-DKTAVLWTI 448
V L DL+ L PL ++ H +V W P+ + L++S D+ ++W +
Sbjct: 284 TVALFDLR-KLNAPLH--VMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDL 334
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 53.6 bits (123), Expect = 3e-07
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
++++ + H G + + ++ + ++ + D+++++ +H+ +E ++ T D TV
Sbjct: 94 VIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHS--VEPVQIIDTFLD-TVM 150
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG 301
V KT ++ GG+ D + D IG+ G + +S+ N G + ++G
Sbjct: 151 SVVL-----TKTEII--GGSVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCV-LAG 202
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
D T+R D TG + + G SK S + S ++ G +DG D+
Sbjct: 203 CLDSTLRLLDRTTGELLQVYK---GHISK-SFKTDCCLTNSDAHVIGGSEDGLVFFWDLV 258
Query: 362 GSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
++ L +F H V SV + P +LT+ DG +
Sbjct: 259 DAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294
Score = 49.6 bits (113), Expect = 4e-06
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 174 SAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVEL 233
SA PT K H+G++ ++ G+ T D+T++L +N H L
Sbjct: 2 SATELPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRL--WNPHRGIL---IKTY 56
Query: 234 TVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YN 292
H VRDV D S GD ++Y D G+ + GH G V ++ +N
Sbjct: 57 KSHGREVRDVHVTSDNAKFCSC-----GGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFN 111
Query: 293 WGGAMFVSGSQDKTVRFWDLRT 314
++ VS D+++R WD R+
Sbjct: 112 DSSSVVVSAGFDRSLRVWDCRS 133
Score = 46.4 bits (105), Expect = 4e-05
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSA 333
K L GH G VL+ +N G ++ +D+T+R W+ G + S G
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYK------SHGRE 62
Query: 334 VASLAV-DPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
V + V + + CG D DV R +++F H +V +V+F+ + +++AG
Sbjct: 63 VRDVHVTSDNAKFCSCG-GDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAG 121
Query: 393 YD 394
+D
Sbjct: 122 FD 123
Score = 38.7 bits (86), Expect = 0.008
Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 22/215 (10%)
Query: 236 HDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKT--FQALSGHSGHVLSLYNW 293
HDG V V F + +S++VS G D + V DC Q + V+S+
Sbjct: 101 HDGEVNAVKF----NDSSSVVVSAGF-DRSLRVWDCRSHSVEPVQIIDTFLDTVMSVV-L 154
Query: 294 GGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
+ GS D TVR +D+R G +S GQP V +++ G ++ G D
Sbjct: 155 TKTEIIGGSVDGTVRTFDMRIG---REMSDNLGQP-----VNCISISNDGNCVLAGCLDS 206
Query: 354 TCALHDVRGSRALQRFTPHSSDVRSVR--FSPGAYYLLTAGYDGRVVLADLQGDLTCPLP 411
T L D LQ + H S + +++ DG V DL + +
Sbjct: 207 TLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDL---VDAKVL 263
Query: 412 SVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
S H V S +HP + L++S D T +W
Sbjct: 264 S-KFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 53.6 bits (123), Expect = 3e-07
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 8/151 (5%)
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWD 311
TSL G + + + + G T GH V +L N G M VSG +K +R WD
Sbjct: 183 TSLRTVGSSNNISVQSSPSH-GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWD 241
Query: 312 LRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTP 371
RTG S V L +D +GR + G D L D+ R L +
Sbjct: 242 PRTG------SKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 372 HSSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
H+ V ++ +P ++ + G D + L DL
Sbjct: 296 HTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Score = 35.9 bits (79), Expect = 0.055
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 150 GFVSPVTNRAKQLLQESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGS 209
G PVT+ +I++ S PT+ K HK S+Y LA + G +L +G
Sbjct: 177 GANGPVTSLRTVGSSNNISVQSSPSHGYTPTI----AKGHKESVYALAMNDTGTMLVSGG 232
Query: 210 NDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVT 269
+K +++ T + + ++L H VR + D+T + L G+ D I +
Sbjct: 233 TEKVLRVWDPRTGS-----KSMKLRGHTDNVR--VLLLDSTGRFCL---SGSSDSMIRLW 282
Query: 270 DCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRT 314
D + + H+ V +L N + SG +D+ + DL T
Sbjct: 283 DLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 53.6 bits (123), Expect = 3e-07
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 8/151 (5%)
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWD 311
TSL G + + + + G T GH V +L N G M VSG +K +R WD
Sbjct: 183 TSLRTVGSSNNISVQSSPSH-GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWD 241
Query: 312 LRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTP 371
RTG S V L +D +GR + G D L D+ R L +
Sbjct: 242 PRTG------SKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 372 HSSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
H+ V ++ +P ++ + G D + L DL
Sbjct: 296 HTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Score = 35.9 bits (79), Expect = 0.055
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 150 GFVSPVTNRAKQLLQESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGS 209
G PVT+ +I++ S PT+ K HK S+Y LA + G +L +G
Sbjct: 177 GANGPVTSLRTVGSSNNISVQSSPSHGYTPTI----AKGHKESVYALAMNDTGTMLVSGG 232
Query: 210 NDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVT 269
+K +++ T + + ++L H VR + D+T + L G+ D I +
Sbjct: 233 TEKVLRVWDPRTGS-----KSMKLRGHTDNVR--VLLLDSTGRFCL---SGSSDSMIRLW 282
Query: 270 DCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRT 314
D + + H+ V +L N + SG +D+ + DL T
Sbjct: 283 DLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 52.8 bits (121), Expect = 5e-07
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H + C+ +S ++LA+GS D +K+ T C H V + F D
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRR-----FDAHSQGVTSLSFSRD 316
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTV 307
+ LL + +I+ GK + GH+ +V +++ G+ ++ S D TV
Sbjct: 317 GSQ---LLSTSFDQTARIHGLKS--GKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTV 371
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSG--RLLVC 348
+ WD +T C+ PP ++V S+ + P ++VC
Sbjct: 372 KVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVC 414
Score = 50.8 bits (116), Expect = 2e-06
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 283 HSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP 341
H VL + ++ M SGSQD ++ W +RTG C+ + V SL+
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFD------AHSQGVTSLSFSR 315
Query: 342 SGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLAD 401
G L+ D T +H ++ + L+ F H+S V F+ ++TA D V + D
Sbjct: 316 DGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 39.5 bits (88), Expect = 0.004
Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 6/154 (3%)
Query: 295 GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPS--GRLLVCGHDD 352
G S S D + WD +G + A + L +D S +L G D
Sbjct: 225 GQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQD 284
Query: 353 GTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPS 412
G + +R ++RF HS V S+ FS LL+ +D + L+
Sbjct: 285 GKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLK--- 341
Query: 413 VPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
H V A + D ++ S+D T +W
Sbjct: 342 -EFRGHTSYVNHAIFTSDGSRIITASSDCTVKVW 374
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 52.8 bits (121), Expect = 5e-07
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 180 TVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGT 239
T +LK+ H+ + C+ +SP LLATG++D VK+ + C + T H
Sbjct: 340 TYILKQQGHYF-DVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCF-----ITFTEHTNA 393
Query: 240 VRDVCFIEDTTNKTSLLVSGG--AGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAM 297
V + F+ D + S + G A D K Y KT+ + L+ + G +
Sbjct: 394 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNY----KTYTTPTPRQFVSLTA-DPSGDV 448
Query: 298 FVSGSQDKTVRF-WDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+G+ D F W +TG +I+S + V L P +LL D T
Sbjct: 449 VCAGTLDSFEIFVWSKKTGQIKDILS------GHEAPVHGLMFSPLTQLLASSSWDYTVR 502
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
L DV S+ H+ DV +V F P L ++ DG++
Sbjct: 503 LWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQI 543
Score = 52.0 bits (119), Expect = 8e-07
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 11/200 (5%)
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWG-GAMFVSGSQDKTV 307
T + S L++ GA D K+ V + + G F + H+ V +L+ +S S D TV
Sbjct: 356 TYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTV 415
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGH-DDGTCALHDVRGSRAL 366
R WD + + P + SL DPSG ++ G D + + +
Sbjct: 416 RAWDFKRYKNYKTYTTPTPRQ-----FVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIK 470
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISAR 426
+ H + V + FSP L ++ +D V L D+ +V RH V++
Sbjct: 471 DILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL----WDVFASKGTVETFRHNHDVLTVA 526
Query: 427 WHPDDFSFLSTSADKTAVLW 446
+ PD S++ D W
Sbjct: 527 FRPDGKQLASSTLDGQINFW 546
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 52.8 bits (121), Expect = 5e-07
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 180 TVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGT 239
T +LK+ H+ + C+ +SP LLATG++D VK+ + C + T H
Sbjct: 380 TYILKQQGHYF-DVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCF-----ITFTEHTNA 433
Query: 240 VRDVCFIEDTTNKTSLLVSGG--AGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAM 297
V + F+ D + S + G A D K Y KT+ + L+ + G +
Sbjct: 434 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNY----KTYTTPTPRQFVSLTA-DPSGDV 488
Query: 298 FVSGSQDKTVRF-WDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+G+ D F W +TG +I+S + V L P +LL D T
Sbjct: 489 VCAGTLDSFEIFVWSKKTGQIKDILS------GHEAPVHGLMFSPLTQLLASSSWDYTVR 542
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
L DV S+ H+ DV +V F P L ++ DG++
Sbjct: 543 LWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQI 583
Score = 52.0 bits (119), Expect = 8e-07
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 11/200 (5%)
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWG-GAMFVSGSQDKTV 307
T + S L++ GA D K+ V + + G F + H+ V +L+ +S S D TV
Sbjct: 396 TYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTV 455
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGH-DDGTCALHDVRGSRAL 366
R WD + + P + SL DPSG ++ G D + + +
Sbjct: 456 RAWDFKRYKNYKTYTTPTPRQ-----FVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIK 510
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISAR 426
+ H + V + FSP L ++ +D V L D+ +V RH V++
Sbjct: 511 DILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL----WDVFASKGTVETFRHNHDVLTVA 566
Query: 427 WHPDDFSFLSTSADKTAVLW 446
+ PD S++ D W
Sbjct: 567 FRPDGKQLASSTLDGQINFW 586
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 52.4 bits (120), Expect = 6e-07
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEG-QEVELTVHDGTVRDVCF 245
K H + LA AG + +GS D TV++ F L+ +++E + VR V +
Sbjct: 174 KGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPS-EGHQVRSVSW 232
Query: 246 IEDTTNKTSLLVSGGAGDCKIYVTDCI-IGKTFQA------LSGHSGHVLSLY--NWGGA 296
T+ L V+G A KI+ D + +G+ + L GH+ L W
Sbjct: 233 --SPTSGQFLCVTGSA-QAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPR 289
Query: 297 M---FVSGSQDKTVRFWDLRTG-GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDD 352
++ S+D ++R WD+ +I P +P + V + A D G+ + G D
Sbjct: 290 TKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGR-VPVTTCAWDRDGKRIAGGVGD 348
Query: 353 GTCALHDVR---GSRA-LQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
G+ + ++ GSR + H+ D+ SV+FS LL+ +DG + + DL+
Sbjct: 349 GSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLR 403
Score = 31.9 bits (69), Expect = 0.90
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 26/209 (12%)
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGKT--FQALSGHSGHV-LSLYNWG--GAMFVSGSQDKT 306
K ++L S G +I+ + + +T + G V ++ W G G D +
Sbjct: 291 KETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGS 350
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSA--VASLAVDPSGRLLVCGHDDGTCALHDVRGSR 364
++ W L+ G S P K + S+ GR+L+ DG+ + D+R +
Sbjct: 351 IQIWSLKPGWG----SRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMK 406
Query: 365 -ALQRFT--PHSSDVRSVRFSPGAYYLLTAGYDGRVVLAD-LQGDLTC-----PLPSVP- 414
AL+ F P+ +V FSP +LT G V D G L C L V
Sbjct: 407 EALKVFEGLPNYYPQTNVAFSPDEQIILT----GTSVEKDSTTGGLLCFYDRTKLEIVQK 462
Query: 415 VARHP-DKVISARWHPDDFSFLSTSADKT 442
V P V+ WHP +TS DK+
Sbjct: 463 VGISPTSSVVQCAWHPRLNQIFATSGDKS 491
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 52.4 bits (120), Expect = 6e-07
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 23/255 (9%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H ++ + +S G T DK +K T GQ + T G + V +
Sbjct: 325 HAKAVRDICFSNDGSKFLTAGYDKNIKYWDTET------GQVIS-TFSTGKIPYVVKLNP 377
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
+K ++L++G D KI D G+ Q H G V ++ + FV+ S DK++
Sbjct: 378 DDDKQNILLAG-MSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 436
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL- 366
R W+ + IS P ++ S++V P+G L D ++ R L
Sbjct: 437 RVWEFGIPVVIKYISEP-----HMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLN 491
Query: 367 --QRFTPH--SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKV 422
+RF H + V FSP ++++ +G+ D + +C + + H
Sbjct: 492 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK---SCKVFRT-LKCHNGVC 547
Query: 423 ISARWHPDDFSFLST 437
I A WHP + S ++T
Sbjct: 548 IGAEWHPLEQSKVAT 562
Score = 48.8 bits (111), Expect = 7e-06
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 9/160 (5%)
Query: 238 GTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCI-IGKTFQALSGHSGHVLSL-YNWGG 295
G + V I + LL+S G DCK+ + D GK + GH+ V + ++ G
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGM-DCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338
Query: 296 AMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGR-LLVCGHDDGT 354
+ F++ DK +++WD TG ++ S K V L D + +L+ G D
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTFS-----TGKIPYVVKLNPDDDKQNILLAGMSDKK 393
Query: 355 CALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYD 394
D+ Q + H V ++ F +T+ D
Sbjct: 394 IVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDD 433
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 343 GRLLVCGHDDGTCALHDVRGS-RALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLAD 401
G LL+ D + DV S + ++ + H+ VR + FS LTAGYD + D
Sbjct: 295 GHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWD 354
Query: 402 LQGDLTCPLPSVPVARHPDKVISARWHPDDFS---FLSTSADKTAVLWTI 448
+ + + + P V + +PDD L+ +DK V W I
Sbjct: 355 TETGQV--ISTFSTGKIPYVV---KLNPDDDKQNILLAGMSDKKIVQWDI 399
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 50.8 bits (116), Expect = 2e-06
Identities = 68/259 (26%), Positives = 99/259 (38%), Gaps = 44/259 (16%)
Query: 180 TVLLKRTKHHKGSIYCLAWSPAGD-LLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDG 238
TV + HK +I W P L TGS D +K+ NT Q V G
Sbjct: 93 TVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNT------AQAVVDFKMPG 146
Query: 239 TVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGA-- 296
V + T L++ G D ++ + D G LSGH V+S+ W +
Sbjct: 147 KVYRTAMSSMAMSHT--LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSV-EWSTSSE 203
Query: 297 -MFVSGSQDKTVRFWDLRTGGCVNIIS---------PP----AGQPSKGSAVASLAVDPS 342
+ +G D +RFWD+R GC ++ PP SK S+VA ++
Sbjct: 204 WVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSSLGGQ 263
Query: 343 GRL-----------LVCGHDDGTCALHDVRGSR-------ALQRFTPHSSDVRSVRFSPG 384
RL V G ++ R R L R T H V ++ +
Sbjct: 264 NRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATND 323
Query: 385 AYYLLTAGYDGRVVLADLQ 403
YLL+AG D R+ L D++
Sbjct: 324 GMYLLSAGSDSRIRLWDIE 342
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 238 GTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAM 297
G VC + T L + +G +I+ D + K + + GH V +L W ++
Sbjct: 207 GVDETVCSVGWALRGTHLAIGTSSGTVQIW--DVLRCKNIRTMEGHRLRVGALA-WSSSV 263
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
SGS+DK++ D+RT + +S G S+ + L R L G +D +
Sbjct: 264 LSSGSRDKSILQRDIRTQ--EDHVSKLKGHKSE---ICGLKWSSDNRELASGGNDNKLFV 318
Query: 358 HDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
+ ++ + RF H++ V+++ +SP + LL +G
Sbjct: 319 WNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASG 353
Score = 40.3 bits (90), Expect = 0.003
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 12/146 (8%)
Query: 169 LFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAG-DLLATGSNDKTVKLMAFNTHACNLE 227
LF N T P + R H ++ +AWSP LLA+G + +NT
Sbjct: 316 LFVWNQHSTQPVL---RFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTT---- 368
Query: 228 GQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV 287
L D T VC + + N L+ + G +I V L+GHS V
Sbjct: 369 --NTHLNCVD-TNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRV 425
Query: 288 LSL-YNWGGAMFVSGSQDKTVRFWDL 312
L L + G V+G+ D+T+RFW++
Sbjct: 426 LYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 34.7 bits (76), Expect = 0.13
Identities = 30/143 (20%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRD 242
++ + H+ + LAWS + +L++GS DK++ T QE ++ G +
Sbjct: 244 IRTMEGHRLRVGALAWSSS--VLSSGSRDKSILQRDIRT-------QEDHVSKLKGHKSE 294
Query: 243 VCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL----YNWGGAMF 298
+C ++ +++ L + G D K++V + + H+ V ++ +++G
Sbjct: 295 ICGLKWSSDNREL--ASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLAS 352
Query: 299 VSGSQDKTVRFWDLRTGGCVNII 321
G+ D+ +RFW+ T +N +
Sbjct: 353 GGGTADRCIRFWNTTTNTHLNCV 375
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.0 bits (114), Expect = 3e-06
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
++++ HKG I+ L +SP G LATG D VK+ +T+ D +
Sbjct: 190 MVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW--------------RITLSDSLLA 235
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG 301
++ N+ + LV I T FQ L GH+G VL L + +S
Sbjct: 236 SFLRQQEPINQQAALVLFPQKAFHIEETP------FQELYGHTGDVLDLAWSDSNLLLSA 289
Query: 302 SQDKTVRFWDLRTGGCV------NIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTC 355
S+DKTVR W C+ N ++ P + AS ++D R+ ++
Sbjct: 290 SKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS-EERVV 348
Query: 356 ALHDVRGSRALQRFTPHSS 374
A DVR S + + P+ +
Sbjct: 349 AWTDVRDSISAISYQPNGN 367
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 366 LQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
+Q+ H + +++FSP YL T G DG V
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVV 222
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 49.6 bits (113), Expect = 4e-06
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 288 LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLV 347
L+L +WG A ++ + D TV WD TG +++ KG V S+ P GR +
Sbjct: 143 LNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTI---DEEKG-PVTSINWAPDGRHVA 198
Query: 348 CGHDDGTCALHDVRGSRALQRFT-PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDL 406
G ++ L D +R L+ H S V S+ ++ + L T G DG ++ D+
Sbjct: 199 VGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN--NHILTTGGMDGLII----NNDV 252
Query: 407 TCPLPSVPVAR-HPDKVISARWHPDDFSFLSTSADKTAVLW 446
P V R H +V +W S D +W
Sbjct: 253 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 293
Score = 47.2 bits (107), Expect = 2e-05
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 171 RDNSAPTAPTVLLKRTKHHKGSIYCLAWSP-AGDLLATGSN--DKTVKLMAFNTHACNLE 227
R ++ + T L R + H ++ LAW P +LLATG D+T+K +T AC
Sbjct: 295 RSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGAC--- 351
Query: 228 GQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV 287
L D T VC + + N+ LL S G ++ + L+GH+ V
Sbjct: 352 -----LNSVD-TGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRV 405
Query: 288 LSL-YNWGGAMFVSGSQDKTVRFWDL 312
L + + G S + D+T+RFW++
Sbjct: 406 LYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 36.7 bits (81), Expect = 0.032
Identities = 63/281 (22%), Positives = 96/281 (34%), Gaps = 23/281 (8%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL--MAFNTHACNLEGQEVE 232
A T T L KG + + W+P G +A G N+ V+L A N L+G
Sbjct: 167 ASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG--- 223
Query: 233 LTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-Y 291
H V + + +L +GG I I + GH+ V L +
Sbjct: 224 ---HQSRVGSLAW------NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKW 274
Query: 292 NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGH 350
+ G SG D V WD + SAV +LA P LL G
Sbjct: 275 SGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGG 334
Query: 351 DDG--TCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA-GYDGRVVLADLQGDLT 407
G T + L S V S+ +S LL++ G+ + +
Sbjct: 335 GGGDRTIKFWNTHTGACLNS-VDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSM- 392
Query: 408 CPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ + H +V+ PD + S + D+T W +
Sbjct: 393 --VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 49.6 bits (113), Expect = 4e-06
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 288 LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLV 347
L+L +WG A ++ + D TV WD TG +++ KG V S+ P GR +
Sbjct: 133 LNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTI---DEEKG-PVTSINWAPDGRHVA 188
Query: 348 CGHDDGTCALHDVRGSRALQRFT-PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDL 406
G ++ L D +R L+ H S V S+ ++ + L T G DG ++ D+
Sbjct: 189 VGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN--NHILTTGGMDGLII----NNDV 242
Query: 407 TCPLPSVPVAR-HPDKVISARWHPDDFSFLSTSADKTAVLW 446
P V R H +V +W S D +W
Sbjct: 243 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 283
Score = 47.2 bits (107), Expect = 2e-05
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 171 RDNSAPTAPTVLLKRTKHHKGSIYCLAWSP-AGDLLATGSN--DKTVKLMAFNTHACNLE 227
R ++ + T L R + H ++ LAW P +LLATG D+T+K +T AC
Sbjct: 285 RSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGAC--- 341
Query: 228 GQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV 287
L D T VC + + N+ LL S G ++ + L+GH+ V
Sbjct: 342 -----LNSVD-TGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRV 395
Query: 288 LSL-YNWGGAMFVSGSQDKTVRFWDL 312
L + + G S + D+T+RFW++
Sbjct: 396 LYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 36.7 bits (81), Expect = 0.032
Identities = 63/281 (22%), Positives = 96/281 (34%), Gaps = 23/281 (8%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL--MAFNTHACNLEGQEVE 232
A T T L KG + + W+P G +A G N+ V+L A N L+G
Sbjct: 157 ASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG--- 213
Query: 233 LTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-Y 291
H V + + +L +GG I I + GH+ V L +
Sbjct: 214 ---HQSRVGSLAW------NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKW 264
Query: 292 NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGH 350
+ G SG D V WD + SAV +LA P LL G
Sbjct: 265 SGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGG 324
Query: 351 DDG--TCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA-GYDGRVVLADLQGDLT 407
G T + L S V S+ +S LL++ G+ + +
Sbjct: 325 GGGDRTIKFWNTHTGACLNS-VDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSM- 382
Query: 408 CPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ + H +V+ PD + S + D+T W +
Sbjct: 383 --VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 49.2 bits (112), Expect = 6e-06
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 21/213 (9%)
Query: 243 VCFIEDTTNKTSLLVSGGAG-DCKIYVTDCIIGKTFQALSGHSGHVLSLYNW-GGAMFVS 300
VCF T++ T+++ S G D + + K + GH V+SL GG F+S
Sbjct: 81 VCF---TSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFIS 137
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDV 360
GS D+TV WD R C ++ G+P + A D G + G + D
Sbjct: 138 GSLDRTVLLWDQRVEKCQGLLR-VQGRP-------AAAYDDQGLIFAIAF-GGYIRMFDA 188
Query: 361 R----GSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV-VLADLQGDLTCPLPSVPV 415
R G + S+ V+FS +L DG + VL +G L PV
Sbjct: 189 RMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPV 248
Query: 416 ARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
A + + A + P+ +S S D + W +
Sbjct: 249 A--GESTLDAAFSPEGMFVVSGSGDGSTHAWGV 279
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/83 (22%), Positives = 37/83 (44%)
Query: 320 IISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSV 379
++S + +P G + A P G +V G DG+ VR + + + S+ +
Sbjct: 239 LLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVI 298
Query: 380 RFSPGAYYLLTAGYDGRVVLADL 402
++ PG+ +T + V+ DL
Sbjct: 299 KWGPGSPMFVTGSSELAFVIPDL 321
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 49.2 bits (112), Expect = 6e-06
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 21/213 (9%)
Query: 243 VCFIEDTTNKTSLLVSGGAG-DCKIYVTDCIIGKTFQALSGHSGHVLSLYNW-GGAMFVS 300
VCF T++ T+++ S G D + + K + GH V+SL GG F+S
Sbjct: 78 VCF---TSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFIS 134
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDV 360
GS D+TV WD R C ++ G+P + A D G + G + D
Sbjct: 135 GSLDRTVLLWDQRVEKCQGLLR-VQGRP-------AAAYDDQGLIFAIAF-GGYIRMFDA 185
Query: 361 R----GSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV-VLADLQGDLTCPLPSVPV 415
R G + S+ V+FS +L DG + VL +G L PV
Sbjct: 186 RMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPV 245
Query: 416 ARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
A + + A + P+ +S S D + W +
Sbjct: 246 A--GESTLDAAFSPEGMFVVSGSGDGSTHAWGV 276
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/83 (22%), Positives = 37/83 (44%)
Query: 320 IISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSV 379
++S + +P G + A P G +V G DG+ VR + + + S+ +
Sbjct: 236 LLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVI 295
Query: 380 RFSPGAYYLLTAGYDGRVVLADL 402
++ PG+ +T + V+ DL
Sbjct: 296 KWGPGSPMFVTGSSELAFVIPDL 318
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 49.2 bits (112), Expect = 6e-06
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 238 GTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAM 297
G VC + T L V G K+ + D K + + GH V +L WG ++
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTG--KVQIWDASRCKRTRTMEGHRLRVGALA-WGSSV 306
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
SGS+DK++ D+R + +S AG S+ V L R L G +D +
Sbjct: 307 LSSGSRDKSILQRDIRCQ--EDHVSKLAGHKSE---VCGLKWSYDNRELASGGNDNRLFV 361
Query: 358 HDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
+ ++ + +++ H++ V+++ +SP + LL +G
Sbjct: 362 WNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASG 396
Score = 41.5 bits (93), Expect = 0.001
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 169 LFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSP-AGDLLATGSNDKTVKLMAFNTHACNLE 227
LF N T P + + H ++ +AWSP LLA+G + +NT N
Sbjct: 359 LFVWNQHSTQPVL---KYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNT-TTNTH 414
Query: 228 GQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV 287
++ T VC + + N L+ + G +I V L+GH+ V
Sbjct: 415 LSSID------TCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRV 468
Query: 288 LSL-YNWGGAMFVSGSQDKTVRFWDL 312
L L + G V+G+ D+T+RFW++
Sbjct: 469 LYLAVSPDGQTIVTGAGDETLRFWNV 494
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 180 TVLLKRTKHHKGSIYCLAWSPAGD-LLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDG 238
TV + HK +I W P + TGS D VK+ NT Q V G
Sbjct: 93 TVRKQHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNT------SQVVVDFKMPG 146
Query: 239 TVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGA-- 296
V + T L++ G D ++ + D G LSGH V+S+ W +
Sbjct: 147 KVYRTAMSSMAMSHT--LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSV-EWSTSSE 203
Query: 297 -MFVSGSQDKTVRFWDLRTGGCVNII 321
+ +G D +RFWD+R GC ++
Sbjct: 204 WVLYTGGCDGAIRFWDIRRAGCFRVL 229
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 48.4 bits (110), Expect = 1e-05
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNK 252
+ C ++S G LLA+ +DK K+ +N +E E H + DV F N
Sbjct: 511 VICCSFSYDGKLLASAGHDK--KVFIWNMETLQVESTPEE---HAHIITDVRF---RPNS 562
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDKTVRFW 310
T L S KI+ G + +SGH+ V+S+ + + S + +RFW
Sbjct: 563 TQLATSSFDKTIKIWDASDP-GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW 621
Query: 311 DLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGS-RALQRF 369
D+ CV + KG++ +G+ L ++ T ++ D+ + + + F
Sbjct: 622 DINAS-CVRAV--------KGASTQVRFQPRTGQFLAAASEN-TVSIFDIENNNKRVNIF 671
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
HSS+V SV +SP + + D + + GD
Sbjct: 672 KGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGD 707
Score = 35.1 bits (77), Expect = 0.097
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H +++ + WSP G+L+A+ S D VKL + ++ C EL+ V F
Sbjct: 672 KGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC-----IHELSNSGNKFHSVVF- 724
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDK 305
+ LLV GG +++ T + ++GH + +L + + S S DK
Sbjct: 725 --HPSYPDLLVIGGYQAIELWNT---MENKCMTVAGHECVISALAQSPSTGVVASASHDK 779
Query: 306 TVRFW 310
+V+ W
Sbjct: 780 SVKIW 784
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 373 SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF 432
+S V FS L +AG+D +V + +++ T + S P H + R+ P+
Sbjct: 508 ASKVICCSFSYDGKLLASAGHDKKVFIWNME---TLQVESTP-EEHAHIITDVRFRPNST 563
Query: 433 SFLSTSADKTAVLW 446
++S DKT +W
Sbjct: 564 QLATSSFDKTIKIW 577
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
K GHS +V S+ ++ G + S S+D V+ W L +G C++ +S
Sbjct: 666 KRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 713
Score = 29.5 bits (63), Expect = 4.8
Identities = 61/261 (23%), Positives = 93/261 (35%), Gaps = 24/261 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
+ H I + + P LAT S DKT+K+ + L G V I
Sbjct: 547 EEHAHIITDVRFRPNSTQLATSSFDKTIKIW-------DASDPGYFLRTISGHAAPVMSI 599
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKT 306
+ KT LL S + + I D I +A+ G S V G F++ + + T
Sbjct: 600 DFHPKKTELLCSCDSNN-DIRFWD-INASCVRAVKGASTQVRFQPRTG--QFLAAASENT 655
Query: 307 VRFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
V +D+ VNI S V S+ P+G L+ +D L +
Sbjct: 656 VSIFDIENNNKRVNIFK------GHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDC 708
Query: 366 LQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISA 425
+ + + SV F P LL G + L + T + VA H + +
Sbjct: 709 IHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN-----TMENKCMTVAGHECVISAL 763
Query: 426 RWHPDDFSFLSTSADKTAVLW 446
P S S DK+ +W
Sbjct: 764 AQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 1e-05
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNK 252
+ C ++S G LLA+ +DK K+ +N +E E H + DV F N
Sbjct: 513 VICCSFSYDGKLLASAGHDK--KVFIWNMETLQVESTPEE---HAHIITDVRF---RPNS 564
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDKTVRFW 310
T L S KI+ G + +SGH+ V+S+ + + S + +RFW
Sbjct: 565 TQLATSSFDKTIKIWDASDP-GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW 623
Query: 311 DLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGS-RALQRF 369
D+ CV + KG++ +G+ L ++ T ++ D+ + + + F
Sbjct: 624 DINAS-CVRAV--------KGASTQVRFQPRTGQFLAAASEN-TVSIFDIENNNKRVNIF 673
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
HSS+V SV +SP + + D + + GD
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGD 709
Score = 35.1 bits (77), Expect = 0.097
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H +++ + WSP G+L+A+ S D VKL + ++ C EL+ V F
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC-----IHELSNSGNKFHSVVF- 726
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDK 305
+ LLV GG +++ T + ++GH + +L + + S S DK
Sbjct: 727 --HPSYPDLLVIGGYQAIELWNT---MENKCMTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 306 TVRFW 310
+V+ W
Sbjct: 782 SVKIW 786
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 373 SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF 432
+S V FS L +AG+D +V + +++ T + S P H + R+ P+
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME---TLQVESTP-EEHAHIITDVRFRPNST 565
Query: 433 SFLSTSADKTAVLW 446
++S DKT +W
Sbjct: 566 QLATSSFDKTIKIW 579
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
K GHS +V S+ ++ G + S S+D V+ W L +G C++ +S
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Score = 29.5 bits (63), Expect = 4.8
Identities = 61/261 (23%), Positives = 93/261 (35%), Gaps = 24/261 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
+ H I + + P LAT S DKT+K+ + L G V I
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIW-------DASDPGYFLRTISGHAAPVMSI 601
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKT 306
+ KT LL S + + I D I +A+ G S V G F++ + + T
Sbjct: 602 DFHPKKTELLCSCDSNN-DIRFWD-INASCVRAVKGASTQVRFQPRTG--QFLAAASENT 657
Query: 307 VRFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
V +D+ VNI S V S+ P+G L+ +D L +
Sbjct: 658 VSIFDIENNNKRVNIFK------GHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDC 710
Query: 366 LQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISA 425
+ + + SV F P LL G + L + T + VA H + +
Sbjct: 711 IHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN-----TMENKCMTVAGHECVISAL 765
Query: 426 RWHPDDFSFLSTSADKTAVLW 446
P S S DK+ +W
Sbjct: 766 AQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 1e-05
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNK 252
+ C ++S G LLA+ +DK K+ +N +E E H + DV F N
Sbjct: 513 VICCSFSYDGKLLASAGHDK--KVFIWNMETLQVESTPEE---HAHIITDVRF---RPNS 564
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDKTVRFW 310
T L S KI+ G + +SGH+ V+S+ + + S + +RFW
Sbjct: 565 TQLATSSFDKTIKIWDASDP-GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW 623
Query: 311 DLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGS-RALQRF 369
D+ CV + KG++ +G+ L ++ T ++ D+ + + + F
Sbjct: 624 DINAS-CVRAV--------KGASTQVRFQPRTGQFLAAASEN-TVSIFDIENNNKRVNIF 673
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
HSS+V SV +SP + + D + + GD
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGD 709
Score = 35.1 bits (77), Expect = 0.097
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H +++ + WSP G+L+A+ S D VKL + ++ C EL+ V F
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC-----IHELSNSGNKFHSVVF- 726
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDK 305
+ LLV GG +++ T + ++GH + +L + + S S DK
Sbjct: 727 --HPSYPDLLVIGGYQAIELWNT---MENKCMTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 306 TVRFW 310
+V+ W
Sbjct: 782 SVKIW 786
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 373 SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF 432
+S V FS L +AG+D +V + +++ T + S P H + R+ P+
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME---TLQVESTP-EEHAHIITDVRFRPNST 565
Query: 433 SFLSTSADKTAVLW 446
++S DKT +W
Sbjct: 566 QLATSSFDKTIKIW 579
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
K GHS +V S+ ++ G + S S+D V+ W L +G C++ +S
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Score = 29.5 bits (63), Expect = 4.8
Identities = 61/261 (23%), Positives = 93/261 (35%), Gaps = 24/261 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
+ H I + + P LAT S DKT+K+ + L G V I
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIW-------DASDPGYFLRTISGHAAPVMSI 601
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKT 306
+ KT LL S + + I D I +A+ G S V G F++ + + T
Sbjct: 602 DFHPKKTELLCSCDSNN-DIRFWD-INASCVRAVKGASTQVRFQPRTG--QFLAAASENT 657
Query: 307 VRFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
V +D+ VNI S V S+ P+G L+ +D L +
Sbjct: 658 VSIFDIENNNKRVNIFK------GHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDC 710
Query: 366 LQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISA 425
+ + + SV F P LL G + L + T + VA H + +
Sbjct: 711 IHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN-----TMENKCMTVAGHECVISAL 765
Query: 426 RWHPDDFSFLSTSADKTAVLW 446
P S S DK+ +W
Sbjct: 766 AQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 1e-05
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNK 252
+ C ++S G LLA+ +DK K+ +N +E E H + DV F N
Sbjct: 513 VICCSFSYDGKLLASAGHDK--KVFIWNMETLQVESTPEE---HAHIITDVRF---RPNS 564
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDKTVRFW 310
T L S KI+ G + +SGH+ V+S+ + + S + +RFW
Sbjct: 565 TQLATSSFDKTIKIWDASDP-GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW 623
Query: 311 DLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGS-RALQRF 369
D+ CV + KG++ +G+ L ++ T ++ D+ + + + F
Sbjct: 624 DINAS-CVRAV--------KGASTQVRFQPRTGQFLAAASEN-TVSIFDIENNNKRVNIF 673
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
HSS+V SV +SP + + D + + GD
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGD 709
Score = 35.1 bits (77), Expect = 0.097
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H +++ + WSP G+L+A+ S D VKL + ++ C EL+ V F
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC-----IHELSNSGNKFHSVVF- 726
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDK 305
+ LLV GG +++ T + ++GH + +L + + S S DK
Sbjct: 727 --HPSYPDLLVIGGYQAIELWNT---MENKCMTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 306 TVRFW 310
+V+ W
Sbjct: 782 SVKIW 786
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 373 SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF 432
+S V FS L +AG+D +V + +++ T + S P H + R+ P+
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME---TLQVESTP-EEHAHIITDVRFRPNST 565
Query: 433 SFLSTSADKTAVLW 446
++S DKT +W
Sbjct: 566 QLATSSFDKTIKIW 579
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
K GHS +V S+ ++ G + S S+D V+ W L +G C++ +S
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Score = 29.5 bits (63), Expect = 4.8
Identities = 61/261 (23%), Positives = 93/261 (35%), Gaps = 24/261 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
+ H I + + P LAT S DKT+K+ + L G V I
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIW-------DASDPGYFLRTISGHAAPVMSI 601
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKT 306
+ KT LL S + + I D I +A+ G S V G F++ + + T
Sbjct: 602 DFHPKKTELLCSCDSNN-DIRFWD-INASCVRAVKGASTQVRFQPRTG--QFLAAASENT 657
Query: 307 VRFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
V +D+ VNI S V S+ P+G L+ +D L +
Sbjct: 658 VSIFDIENNNKRVNIFK------GHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDC 710
Query: 366 LQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISA 425
+ + + SV F P LL G + L + T + VA H + +
Sbjct: 711 IHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN-----TMENKCMTVAGHECVISAL 765
Query: 426 RWHPDDFSFLSTSADKTAVLW 446
P S S DK+ +W
Sbjct: 766 AQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 1e-05
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNK 252
+ C ++S G LLA+ +DK K+ +N +E E H + DV F N
Sbjct: 513 VICCSFSYDGKLLASAGHDK--KVFIWNMETLQVESTPEE---HAHIITDVRF---RPNS 564
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDKTVRFW 310
T L S KI+ G + +SGH+ V+S+ + + S + +RFW
Sbjct: 565 TQLATSSFDKTIKIWDASDP-GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW 623
Query: 311 DLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGS-RALQRF 369
D+ CV + KG++ +G+ L ++ T ++ D+ + + + F
Sbjct: 624 DINAS-CVRAV--------KGASTQVRFQPRTGQFLAAASEN-TVSIFDIENNNKRVNIF 673
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
HSS+V SV +SP + + D + + GD
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGD 709
Score = 35.1 bits (77), Expect = 0.097
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H +++ + WSP G+L+A+ S D VKL + ++ C EL+ V F
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC-----IHELSNSGNKFHSVVF- 726
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDK 305
+ LLV GG +++ T + ++GH + +L + + S S DK
Sbjct: 727 --HPSYPDLLVIGGYQAIELWNT---MENKCMTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 306 TVRFW 310
+V+ W
Sbjct: 782 SVKIW 786
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 373 SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF 432
+S V FS L +AG+D +V + +++ T + S P H + R+ P+
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME---TLQVESTP-EEHAHIITDVRFRPNST 565
Query: 433 SFLSTSADKTAVLW 446
++S DKT +W
Sbjct: 566 QLATSSFDKTIKIW 579
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
K GHS +V S+ ++ G + S S+D V+ W L +G C++ +S
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Score = 29.5 bits (63), Expect = 4.8
Identities = 61/261 (23%), Positives = 93/261 (35%), Gaps = 24/261 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
+ H I + + P LAT S DKT+K+ + L G V I
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIW-------DASDPGYFLRTISGHAAPVMSI 601
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKT 306
+ KT LL S + + I D I +A+ G S V G F++ + + T
Sbjct: 602 DFHPKKTELLCSCDSNN-DIRFWD-INASCVRAVKGASTQVRFQPRTG--QFLAAASENT 657
Query: 307 VRFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA 365
V +D+ VNI S V S+ P+G L+ +D L +
Sbjct: 658 VSIFDIENNNKRVNIFK------GHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDC 710
Query: 366 LQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISA 425
+ + + SV F P LL G + L + T + VA H + +
Sbjct: 711 IHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN-----TMENKCMTVAGHECVISAL 765
Query: 426 RWHPDDFSFLSTSADKTAVLW 446
P S S DK+ +W
Sbjct: 766 AQSPSTGVVASASHDKSVKIW 786
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 48.4 bits (110), Expect = 1e-05
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 280 LSGHSGHVLSLY-NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLA 338
L GH + LY + + +SGS+D T F LR G + + P+G SAV+ LA
Sbjct: 1107 LCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSG-----SAVSKLA 1161
Query: 339 VDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVV 398
GR+++ G DD + L+ + G + + + + S +L++AG G+++
Sbjct: 1162 ASHHGRIVLYGDDDLSLHLYSINGKHLAS--SESNGRINCLELSKCGEFLVSAGDQGQII 1219
Query: 399 LADL 402
+ +
Sbjct: 1220 VRSM 1223
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTV 214
+++ +HHK + C+A + +LATGS D TV
Sbjct: 1038 VVQSIRHHKDVVSCVAVTADSTILATGSYDTTV 1070
Score = 29.9 bits (64), Expect = 3.6
Identities = 47/189 (24%), Positives = 71/189 (37%), Gaps = 30/189 (15%)
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGS 302
CF + LVS G + +V G+ Q++ H V + + +GS
Sbjct: 1006 CFAAMQMPLENFLVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGS 1065
Query: 303 QDKTVRFWD---LRT------GGCVNIISPP---AGQPS-----KGSAVASLAVDPSGRL 345
D TV WD +RT ++ A PS + L V +
Sbjct: 1066 YDTTVMVWDILRMRTPEKRVRNTHAEVLRKDIVIADAPSHILCGHDDIITCLYVSTDLDI 1125
Query: 346 LVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPG-AYYLLTAGYDGRVVLADLQG 404
++ G DGTC H +R R +RS++ G A L A + GR+VL
Sbjct: 1126 VISGSKDGTCVFHTLREGRY----------IRSLKHPSGSAVSKLAASHHGRIVLYG-DD 1174
Query: 405 DLTCPLPSV 413
DL+ L S+
Sbjct: 1175 DLSLHLYSI 1183
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 48.4 bits (110), Expect = 1e-05
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ VS S+DK++ W L ++ V + + G+ + G DG
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRR-LTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVA 416
L D+ + +RF H+ DV SV FS +++A D + L + G+ + S
Sbjct: 89 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI-SEGGE 147
Query: 417 RHPDKVISARWHPDDF--SFLSTSADKTAVLWTI 448
H D V R+ P+ + +S S DKT +W +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Score = 44.4 bits (100), Expect = 2e-04
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 299 VSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALH 358
VS S DKTV+ W+L C + S AG V+++AV P G L G DG L
Sbjct: 168 VSASWDKTVKVWNL--SNC-KLRSTLAGHTGY---VSTVAVSPDGSLCASGGKDGVVLLW 221
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
D+ + L +S + ++ FSP Y+L A G + + DL+
Sbjct: 222 DLAEGKKLYSLEANSV-IHALCFSPNRYWLCAATEHG-IKIWDLE 264
Score = 38.3 bits (85), Expect = 0.010
Identities = 51/190 (26%), Positives = 72/190 (37%), Gaps = 16/190 (8%)
Query: 265 KIYVTDCIIGKTFQALSGHSGHVLSLY-NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISP 323
K+ D G + L+GHS V + + G +SGS D +R WDL G
Sbjct: 44 KLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRF-- 101
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGS---RALQRFTPHSSDVRSVR 380
G V S+A R +V D T L + G + H V VR
Sbjct: 102 -VGHTKD---VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 157
Query: 381 FSPGAYY--LLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTS 438
FSP +++A +D V + +L C L S +A H V + PD S
Sbjct: 158 FSPNTLQPTIVSASWDKTVKVWNLS---NCKLRST-LAGHTGYVSTVAVSPDGSLCASGG 213
Query: 439 ADKTAVLWTI 448
D +LW +
Sbjct: 214 KDGVVLLWDL 223
Score = 37.5 bits (83), Expect = 0.018
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 178 APTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHD 237
A V +R H + +A+S + + S D+T+KL +NT E + T+ +
Sbjct: 93 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL--WNTLG------ECKYTISE 144
Query: 238 GTV--RD-VCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNW 293
G RD V + + N + + D + V + K L+GH+G+V ++ +
Sbjct: 145 GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 204
Query: 294 GGAMFVSGSQDKTVRFWDLRTG 315
G++ SG +D V WDL G
Sbjct: 205 DGSLCASGGKDGVVLLWDLAEG 226
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 48.0 bits (109), Expect = 1e-05
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HKGSIY ++WSP G + T S DK+ K+ + + + G V D+
Sbjct: 231 HKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCL 290
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFV-SGSQDKT 306
N + VS G G I+ + FQ SGH +V SL G A ++ SGS D
Sbjct: 291 WQNDHIVTVSLG-GTISIFSASDLDKSPFQ-FSGHMKNVSSLAVLKGNADYILSGSYDGL 348
Query: 307 VRFWDLRTGGC 317
+ W L G C
Sbjct: 349 ICKWMLGRGFC 359
Score = 41.9 bits (94), Expect = 8e-04
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 334 VASLAVDPSG--RLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
V S A+ P+ R++ CG +D ++ + HS+ V VRF+P +T
Sbjct: 147 VLSCAIKPTRPFRIVTCG-EDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITV 205
Query: 392 GYDGRVVLADLQGDLTCPLPSVPVAR--HPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
D + ++ D + TC + + H + + W PD L+ SADK+A +W I
Sbjct: 206 SSDKKGIIYDGK---TCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 36.3 bits (80), Expect = 0.042
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTV 214
LK +H I CLAWSP ++ATGS D V
Sbjct: 527 LKNMLYHSARINCLAWSPNSTMVATGSLDTCV 558
Score = 34.7 bits (76), Expect = 0.13
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 331 GSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQR--FTPHSSDVRSVRFSPGAYYL 388
G V +LAV P G V G DG L+ + G + H + +R+SP
Sbjct: 447 GFIVTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMF 506
Query: 389 LTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+A + V+ D ++ + + H ++ W P+ + S D +++ +
Sbjct: 507 ASADLNREAVVWD---RVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEV 563
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 47.6 bits (108), Expect = 2e-05
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 184 KRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDV 243
K+ HKG + ++++ GD+L +GS+D+ V L + T + L + H +
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFD----SGHFNNIFQA 104
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSG-HSG--HVLSLYNWGGAMFVS 300
F+ + ++T +V+ A Y G+ +L G H G H L++ F +
Sbjct: 105 KFMPFSDDRT--IVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFYT 162
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP--SGRLLVCGHDDGTCALH 358
+D V+ +DLRT N+ + + + + ++AVDP G L V G D+ ++
Sbjct: 163 CGEDGAVKHFDLRTRVATNLFTCKEAKFNLVVYLHAIAVDPRNPGLLAVAGMDE-YARVY 221
Query: 359 DVRGSRA 365
D+R R+
Sbjct: 222 DIRSYRS 228
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 47.6 bits (108), Expect = 2e-05
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Query: 277 FQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
+++L +G LS+ ++ SGS D +R WD V I+ G GS +
Sbjct: 191 YRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELC 250
Query: 336 --SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
SL G +LV G G+ D + LQ + H DV ++ SP + +AG
Sbjct: 251 IWSLLSLRYG-VLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGA 309
Query: 394 DGRVVLADLQGDLTCPLPSVP-VARHPDKVISARWHPDDFSFLSTS 438
DG+V+L L G + P A+ D + R H D L+ +
Sbjct: 310 DGQVILYKLSGGTSRSQDFKPSSAQKWDYIGCVRAHTHDIRALTVA 355
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 47.2 bits (107), Expect = 2e-05
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 192 SIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTN 251
+I + + P G+++ATG + ++ ++ LE ++ +T + + +
Sbjct: 73 AIGAIEFDPTGEIIATGGIARKIRSYRLSSL---LESRDDHVTASESYICTPAKLSSLKW 129
Query: 252 KTSLLVSG---GAGDCKIYVTDCIIGKTFQALSG--HSGHVL-----SLYNWGGAMFVSG 301
+ SG G+GD VT+ + K H G + +LYN G + SG
Sbjct: 130 RPDF--SGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYN-GSLIGASG 186
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHDV 360
S D TV+ WD R GG + P G G+A+ S+ DP G + G D ++D+
Sbjct: 187 SDDGTVQMWDPRNGGTLEETVRPGG----GAAICSVEFDPFGGSSIAVGCADRNAYVYDI 242
Query: 361 RG-SRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
R L H+ V RF ++ ++T DG + D+
Sbjct: 243 RRLVDPLIVLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDI 284
Score = 36.7 bits (81), Expect = 0.032
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 202 GDLL-ATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE-DTTNKTSLLVSG 259
G L+ A+GS+D TV++ G +E TV G +C +E D +S+ V
Sbjct: 179 GSLIGASGSDDGTVQMWDPRN------GGTLEETVRPGGGAAICSVEFDPFGGSSIAV-- 230
Query: 260 GAGDCKIYVTDCI-IGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCV 318
G D YV D + L GH+ V V+GS D +++ WD+ G
Sbjct: 231 GCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGR-- 288
Query: 319 NIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
++ G + + V L+V G L+V G ++ ++D R
Sbjct: 289 RVVRTYRGHVNSRNFV-GLSVWRHGGLVVSGSENNQVFVYDKR 330
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 47.2 bits (107), Expect = 2e-05
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 16/158 (10%)
Query: 297 MFVSGSQDKTVRFWDL----RTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDD 352
+ S S D TVR W+ R+ C ++ + + V S A PSG+LL D
Sbjct: 41 ILASCSGDNTVRIWEQSSLSRSWTCKTVL-----EETHTRTVRSCAWSPSGQLLATASFD 95
Query: 353 GTCALHDVRGSR--ALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLAD-LQG-DLTC 408
GT + GS + H ++V+SV ++ L T D V + + L+G + C
Sbjct: 96 GTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDC 155
Query: 409 PLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
+ + H V +WHP S S D T +W
Sbjct: 156 ---AAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Score = 40.7 bits (91), Expect = 0.002
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 14/195 (7%)
Query: 166 SINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACN 225
++ ++ +S + T + H ++ AWSP+G LLAT S D T + + +
Sbjct: 50 TVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGI--WKNYGSE 107
Query: 226 LEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSG 285
E L H+ V+ V + N + ++ + D +++ + + G + + +G
Sbjct: 108 FECIST-LEGHENEVKSVSW-----NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTG 161
Query: 286 HV--LSLYNWGGAMFV--SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKG--SAVASLAV 339
H + + W M V S S D T++ W G+ + G S V S++
Sbjct: 162 HTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF 221
Query: 340 DPSGRLLVCGHDDGT 354
+ +G +V DD T
Sbjct: 222 NAAGDKMVTCSDDLT 236
Score = 35.5 bits (78), Expect = 0.073
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLE-GQEVELTVHDGTV---RDVC 244
H +++ ++++ AGD + T S+D T+K+ + T ++ G+E +H T+ D
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKI--WGTDIAKMQSGEEYAPWIHLCTLSGYHDRT 269
Query: 245 FIEDTTNKTSLLVSGGAGD--CKIYVT---DCIIGKTFQAL----SGHSGHVLSLYNW-- 293
++ ++ S GAGD +++V D + G ++ L H V S+ W
Sbjct: 270 IYSAHWSRDDIIAS-GAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSV-QWSP 327
Query: 294 --GGAMFVSGSQDKTVRFWDLRT 314
G + S S D V+ W L T
Sbjct: 328 GEGNRLLASASDDGMVKIWQLAT 350
Score = 34.3 bits (75), Expect = 0.17
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 372 HSSDVRSVRFSPGAYYLLTAGYDGRV-VLADLQGDLTCPLPSVPVARHPDKVISARWHPD 430
H+ VRS +SP L TA +DG + + + C + H ++V S W+
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFEC---ISTLEGHENEVKSVSWNAS 129
Query: 431 DFSFLSTSADKTAVLWTI 448
+ S DK+ +W +
Sbjct: 130 GSCLATCSRDKSVWIWEV 147
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 181 VLLKRTKHHKGSIYCLAWSP--AGDLLATGSNDKTVKLMAFNT 221
+LLK+ K H+ + + WSP LLA+ S+D VK+ T
Sbjct: 308 LLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLAT 350
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 46.8 bits (106), Expect = 3e-05
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 277 FQALSGHSGHVLSLYNWG--GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSA- 333
+++L SG LS+ W SGS D +R WD + C + AG GS+
Sbjct: 191 YRSLPRVSGRALSV-TWSPDAKRIFSGSSDGLIRCWDATS--CHEVYRITAGLGGLGSSS 247
Query: 334 ---VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLT 390
V SL + +LV G GT D L+ + H DV ++ +P + +
Sbjct: 248 EICVWSL-LSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFS 306
Query: 391 AGYDGRVVLADLQG 404
AG DG+V+L L G
Sbjct: 307 AGADGQVILYKLSG 320
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 46.8 bits (106), Expect = 3e-05
Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 19/211 (9%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE- 247
HK + A+S L TG +K +++ N L+ E+ G++R + ++
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLN----RLDAPPTEIDKSPGSIRTLTWLHG 156
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTV 307
D T +S GG + + D GK Q L S + + G +++ + TV
Sbjct: 157 DQTILSSCTDIGG-----VRLWDVRSGKIVQTLETKSPVTSAEVSQDGR-YITTADGSTV 210
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHDVRGSRAL 366
+FWD G V P + S +++P SG V G +D L D + +
Sbjct: 211 KFWDANHFGLVKSYDMPCN-------IESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEI 263
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
H V VRF+P + DG +
Sbjct: 264 GCNKGHHGPVHCVRFAPTGESYASGSEDGTI 294
Score = 37.1 bits (82), Expect = 0.024
Identities = 42/172 (24%), Positives = 64/172 (37%), Gaps = 15/172 (8%)
Query: 282 GHSGHVLSLY----NWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASL 337
GHS V+ L+ G +S S+D + TG + G AV S
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKG------AVWSS 67
Query: 338 AVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
+D + D + L D L F H VR+ FS YL+T G++ +
Sbjct: 68 CLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKIL 126
Query: 398 VLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAV-LWTI 448
+ DL P + + P + + W D + LS+ D V LW +
Sbjct: 127 RVFDLN---RLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDV 175
Score = 33.9 bits (74), Expect = 0.22
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
K H G ++C+ ++P G+ A+GS D T+++
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRI 296
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 257 VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFW 310
V+GG D + + D GK GH G V + + G + SGS+D T+R W
Sbjct: 244 VAGGE-DMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 43 VRCAEFHPNGKLYAVGSNTKTLRI 66
V C F P G+ YA GS T+RI
Sbjct: 273 VHCVRFAPTGESYASGSEDGTIRI 296
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.4 bits (105), Expect = 4e-05
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 27/230 (11%)
Query: 233 LTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-- 290
L ++ + D+ F+ D + L V+ + ++Y D L+GH VLSL
Sbjct: 354 LVGYNEEIADMKFLGD--EEQFLAVATNLEEVRVY--DVATMSCSYVLAGHKEVVLSLDT 409
Query: 291 --YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVC 348
+ G + V+GS+DKTVR W+ + C+ + G G +A S V
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV-----GTGHNGDILAVAFAKKSFSFFVS 464
Query: 349 GHDDGTCALHDVRG----------SRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVV 398
G D T + + G + H D+ SV + + T D
Sbjct: 465 GSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTAS 524
Query: 399 LADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ L DL + V + H ++ S + D ++ S DKT +W I
Sbjct: 525 IWRLP-DL---VHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAI 570
Score = 44.0 bits (99), Expect = 2e-04
Identities = 39/154 (25%), Positives = 54/154 (35%), Gaps = 8/154 (5%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ S + +R WDL T C+ G V +A SG LL D
Sbjct: 74 LLFSAGHSRQIRVWDLETLKCIRSWKGHEGP------VMGMACHASGGLLATAGADRKVL 127
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAY--YLLTAGYDGRVVLADLQGDLTCPLPSVP 414
+ DV G F H V S+ F P + L++ D V + DL T
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAI 187
Query: 415 VARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
+ +H V S D + S DK LW +
Sbjct: 188 MEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 43.6 bits (98), Expect = 3e-04
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 27/255 (10%)
Query: 205 LATGSNDKTVKLMAFNTHACN--LEG-QEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGA 261
LA +N + V++ T +C+ L G +EV L++ D C ++ ++L+ G+
Sbjct: 374 LAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSL------DTC----VSSSGNVLIVTGS 423
Query: 262 GDCKIYVTDCIIGKTFQALSGHSGHVLSLY--NWGGAMFVSGSQDKTVRFWDLRTGGCVN 319
D + + + +GH+G +L++ + FVSGS D+T++ W L G
Sbjct: 424 KDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL--DGISE 481
Query: 320 IISPPAGQPSKGSAVA------SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHS 373
P ++ A S+AV + L+ G +D T ++ + + H
Sbjct: 482 DSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK 541
Query: 374 SDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFS 433
+ SV FS ++TA D V + + D +C H V+ A + D
Sbjct: 542 RRIFSVEFSTVDQCVMTASGDKTVKIWAIS-DGSC---LKTFEGHTSSVLRASFITDGTQ 597
Query: 434 FLSTSADKTAVLWTI 448
F+S AD LW +
Sbjct: 598 FVSCGADGLLKLWNV 612
Score = 39.9 bits (89), Expect = 0.003
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 24/206 (11%)
Query: 204 LLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSG-GAG 262
L+ TGS DKTV+L + +C G T H+G + V F + S VSG G
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVG-----TGHNGDILAVAFAK---KSFSFFVSGSGDR 469
Query: 263 DCKIYVTDCIIG--------KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLR 313
K++ D I KT ++ H + S+ ++ +GS+D+T W R
Sbjct: 470 TLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIW--R 527
Query: 314 TGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHS 373
V++++ G + +V VD + ++ D T + + L+ F H+
Sbjct: 528 LPDLVHVVT-LKGHKRRIFSVEFSTVD---QCVMTASGDKTVKIWAISDGSCLKTFEGHT 583
Query: 374 SDVRSVRFSPGAYYLLTAGYDGRVVL 399
S V F ++ G DG + L
Sbjct: 584 SSVLRASFITDGTQFVSCGADGLLKL 609
Score = 39.5 bits (88), Expect = 0.004
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 22/179 (12%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFN--THACNLEGQEVELTVHDGTVRDVCFI 246
H I +A + L+ TGS D+T + H L+G + + + + D C +
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDK 305
+ +KT + + G C KTF+ GH+ VL + + G FVS D
Sbjct: 558 TASGDKTVKIWAISDGSCL---------KTFE---GHTSSVLRASFITDGTQFVSCGADG 605
Query: 306 TVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL-HDVRGS 363
++ W++ T C+ A V +LAV ++ G D L HD S
Sbjct: 606 LLKLWNVNTSECI------ATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTAS 658
Score = 39.1 bits (87), Expect = 0.006
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRD 242
++ K H+G + +A +G LLAT D+ V + + C H G V
Sbjct: 95 IRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCT-----HYFRGHKGVVSS 149
Query: 243 VCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKT----FQALSGHSGHVLSL-YNWGGAM 297
+ F D +NK ++L+S G+ D + V D T + H V S+ + G
Sbjct: 150 ILFHPD-SNK-NILIS-GSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLT 206
Query: 298 FVSGSQDKTVRFWDLRTGGC 317
S +DK V WDL C
Sbjct: 207 LFSAGRDKVVNLWDLHDYSC 226
Score = 37.1 bits (82), Expect = 0.024
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 15/172 (8%)
Query: 192 SIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTN 251
++ LA SP LL + + + +++ T C + H+G V +
Sbjct: 62 TLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKG-----HEGPVMGMA----CHA 112
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLY---NWGGAMFVSGSQDKTVR 308
LL + GA D K+ V D G GH G V S+ + + +SGS D TVR
Sbjct: 113 SGGLLATAGA-DRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVR 171
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDV 360
WDL A SAV S+A+ G L D L D+
Sbjct: 172 VWDLNAKNTEK--KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 36.3 bits (80), Expect = 0.042
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 10/150 (6%)
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
VR +D+ T C ++ AG ++ + L+V G D T L + +
Sbjct: 383 VRVYDVATMSCSYVL---AGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCI 439
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVV----LADLQGDLTCPL---PSVPVARHP 419
T H+ D+ +V F+ ++ +G R + L + D P+ VA H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 420 DKVISARWHPDDFSFLSTSADKTAVLWTIP 449
+ S +D + S D+TA +W +P
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLP 529
Score = 33.9 bits (74), Expect = 0.22
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHAC--NLEGQEVELTVHDGTVRDVC 244
K HK I+ + +S + T S DKTVK+ A + +C EG H +V
Sbjct: 538 KGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEG-------HTSSVLRAS 590
Query: 245 FIEDTTNKTSLLVSGGAGDCKIYVTDCI 272
FI D T S G + ++CI
Sbjct: 591 FITDGTQFVSCGADGLLKLWNVNTSECI 618
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 46.4 bits (105), Expect = 4e-05
Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 20/276 (7%)
Query: 183 LKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL--MAFNTHACNLEGQEVELTVHDGTV 240
L T K LA S G LA G + + + + + C ++ E E+ +
Sbjct: 378 LVETCGSKFGFRALAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSF 437
Query: 241 RDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGH--VLSL-YNWGGAM 297
+ + D+ N +SLL SGG G I++ D + + F + G V S+ + G
Sbjct: 438 PVLTNV-DSENASSLLASGGKGRA-IHIYD--VKRNFDPVGSVCGSAAVTSVKFACNGRK 493
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
++ D+ F R V + SP Q + +AVDP+ L+V D +
Sbjct: 494 MLTSGADRLQMFDVNRKASSVRL-SPSHTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINI 552
Query: 358 HDVRGSRALQRF---TPHSSDVRSVRFSPGAYYLLTAGYDGRVVLAD-LQGDLTCPLPSV 413
D+ + ++ F H V+ V P YL+ + + + D + G+L
Sbjct: 553 FDIESGKLVRSFKQDRDHGDPVK-VILDPSCNYLVCSYSNRTICFVDFVTGELV-----A 606
Query: 414 PVARHPDKVISARWHPDDFSFLSTSADKTAVLWTIP 449
H + V + PD +S ++D +W +P
Sbjct: 607 QATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKLP 642
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 275 KTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAG 326
K +L GHSG V + + GG M SGS DKT++ WDL T C+ + G
Sbjct: 249 KYLTSLEGHSGEV-TCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTG 299
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG 315
++ G+ D I + D + L H+G V SL W + +S S D T++ W
Sbjct: 270 MLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCL-ISSSLDGTIKVWAYSEN 328
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQR-FTPHS 373
G + ++ + S A++ + + ++ C + +GT + D+ + R F+ H+
Sbjct: 329 GILKVVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTHT 387
Score = 36.3 bits (80), Expect = 0.042
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 179 PTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDG 238
P L + H G + C A G +L +GS DKT+K+ NT C + ++ TV
Sbjct: 247 PFKYLTSLEGHSGEVTCFA--VGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL 304
Query: 239 TVRDVCFIEDTTNKT 253
D C I + + T
Sbjct: 305 LCWDKCLISSSLDGT 319
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 45.6 bits (103), Expect = 7e-05
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 28/294 (9%)
Query: 165 ESINLFRDNSA--PTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTH 222
++++L++D+ P+ ++ HK ++ + +S +G LAT S+D T +
Sbjct: 197 DAVSLYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKV--- 253
Query: 223 ACNLEGQEVELT-VHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDC-IIGKTFQAL 280
L+ +VEL + V F+ + + T LL G A K++ D ++ TF
Sbjct: 254 ---LDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFG-- 308
Query: 281 SGHSGHVLSLYNW--GGAMFVSGSQD--KTVRFWDLRTGGCVNIISPPAGQPSKGSAVAS 336
+ ++G +S W V GS D + + WD T G N I A + ++ V
Sbjct: 309 NNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWD--TDG--NEIK--AWRGTRIPKVVD 362
Query: 337 LAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFS-PGAYYLLTAGYDG 395
LAV P G ++ D + ++ ++R + S+ S G ++++
Sbjct: 363 LAVTPDGESMITVFSDKEIRILNL--ETKVERVISEEQPITSLSISGDGKFFIVNLSCQ- 419
Query: 396 RVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFL-STSADKTAVLWTI 448
+ L DL G+ PL R VI + + D SF+ S S D +W +
Sbjct: 420 EIHLWDLAGEWKQPL-KFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNL 472
Score = 35.1 bits (77), Expect = 0.097
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 254 SLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNW---GGAMFVSGSQDKTVRFW 310
S ++ G+ D ++Y+ + K + LSGHS ++ +W M S S D+T+R W
Sbjct: 455 SSFIASGSEDSQVYIWNLKNTKPLEVLSGHS-MTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 45.6 bits (103), Expect = 7e-05
Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 17/215 (7%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLM----AFNTHACNLEGQEVELTVHDGTVRDVC 244
H GSI+ + +S G LA+ D + + A L+ E+ L +G+
Sbjct: 412 HNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPEPTT 471
Query: 245 FIEDTTNKTSLLVSGGAGDCKIYVTDCIIG---KTFQALSGHSGHVLSLYNWGGAMFVSG 301
+TS+ + + I+V D + G K F + GH VL L +S
Sbjct: 472 MSPRRRGRTSISRKSLSLE-NIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSS 530
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHDV 360
S DKTVR W+L + C+ + S V + +P R + G D + +
Sbjct: 531 SMDKTVRLWNLSSQTCLKVF-------SHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSI 583
Query: 361 RGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDG 395
+ + + H V S ++P +L Y G
Sbjct: 584 PDRQVVDWYDLHEM-VTSACYTPDGQGVLVGSYKG 617
Score = 33.9 bits (74), Expect = 0.22
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 369 FTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWH 428
F H DV + +S + +LL++ D V L +L TC + V H D V +++
Sbjct: 509 FQGHVDDVLDLAWSK-SQHLLSSSMDKTVRLWNLSSQ-TC----LKVFSHSDYVTCIQFN 562
Query: 429 P-DDFSFLSTSADKTAVLWTIP 449
P DD F+S S D +W+IP
Sbjct: 563 PVDDRYFISGSLDAKVRVWSIP 584
Score = 29.5 bits (63), Expect = 4.8
Identities = 37/159 (23%), Positives = 58/159 (36%), Gaps = 21/159 (13%)
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
F+SGS D VR W + V+ V S P G+ ++ G G+C +
Sbjct: 569 FISGSLDAKVRVWSIPDRQVVDWYD-------LHEMVTSACYTPDGQGVLVGSYKGSCRM 621
Query: 358 HDVRGSRALQRF---------TPHSSDVRSVRFSPG-AYYLLTAGYDGRVVLADLQGDLT 407
+ ++ Q+ H + +F PG + +L D R+ + D DL
Sbjct: 622 YSASDNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVD-GTDLV 680
Query: 408 CPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
L R+ ISA D +S S D +W
Sbjct: 681 NKLKGF---RNTSSQISASITADGKYVVSASEDSHVYIW 716
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 45.2 bits (102), Expect = 9e-05
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQ-EVELT-VH---------- 236
H+G I+ + +SP LLA+ D + + + C + E LT +H
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHV--WEVQECEIMSMNEGSLTPIHPSMSGSTDKS 467
Query: 237 -DGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIG---KTFQALSGHSGHVLSLYN 292
+G +V + KTS+ G ++ + + K + +GH VL L +
Sbjct: 468 SEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDL-S 526
Query: 293 WGGA-MFVSGSQDKTVRFWDLRTGGCVNIIS 322
W + + +S S DKTVR WD+ T C+ + +
Sbjct: 527 WSRSQLLLSSSMDKTVRLWDIETQSCLKLFA 557
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 45.2 bits (102), Expect = 9e-05
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 275 KTFQALSGHSGHVLSLYNWG--GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGS 332
K L GH+ V+ L NW +M SGS D TV W++RTG C ++ S
Sbjct: 109 KAVMTLRGHTADVVDL-NWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLR------GHLS 161
Query: 333 AVASLAVDPSGRLLVCGHDDGT 354
V + DP G + DD T
Sbjct: 162 LVKGVTWDPIGSFIASQSDDKT 183
Score = 39.9 bits (89), Expect = 0.003
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 16/181 (8%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL---------MAFNT-HACNLEGQEV 231
LL + H GS+ C+ W+ +A+GS+D+ +++ F + A ++E +
Sbjct: 51 LLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKA 110
Query: 232 ELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLY 291
+T+ G DV + + + S+L SG D +++ + G L GH V +
Sbjct: 111 VMTLR-GHTADVVDL-NWSPDDSMLASGSL-DNTVHIWNMRTGMCTTVLRGHLSLVKGV- 166
Query: 292 NWG--GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCG 349
W G+ S S DKTV W G + + + L P G L
Sbjct: 167 TWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLGWSPCGHFLTTT 226
Query: 350 H 350
H
Sbjct: 227 H 227
Score = 33.5 bits (73), Expect = 0.29
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARH 418
DV +A+ H++DV + +SP L + D V + +++ + C + + H
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGM-C---TTVLRGH 159
Query: 419 PDKVISARWHPDDFSFLSTSADKTAVLW 446
V W P S S DKT ++W
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIW 187
Score = 31.9 bits (69), Expect = 0.90
Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 17/146 (11%)
Query: 320 IISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG----SRALQRFTPHSSD 375
I P +G + S+ V P+G G D D++ R L H
Sbjct: 2 IAEKPFWVKHEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGS 61
Query: 376 VRSVRFSPGAYYLLTAGYDGRVVLADLQ-GDLTCPLPS------------VPVARHPDKV 422
V VR++ + Y+ + D + + + + G T S + + H V
Sbjct: 62 VNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADV 121
Query: 423 ISARWHPDDFSFLSTSADKTAVLWTI 448
+ W PDD S S D T +W +
Sbjct: 122 VDLNWSPDDSMLASGSLDNTVHIWNM 147
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 45.2 bits (102), Expect = 9e-05
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 268 VTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTVRFWDLRT-GGCVNIISPPA 325
+ D GKT + LSGH S ++ G F +G+QDKT R WD+R V ++
Sbjct: 303 IVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNL 362
Query: 326 GQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGA 385
G A+ S+ G+ + ++DV ++ ++ + FSP
Sbjct: 363 G------AIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDT 416
Query: 386 YYLLTAGYD 394
L +D
Sbjct: 417 EALFIGVWD 425
Score = 31.9 bits (69), Expect = 0.90
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
H D ++ WHPD +F + + DKT +W I
Sbjct: 318 HLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 44.8 bits (101), Expect = 1e-04
Identities = 53/253 (20%), Positives = 103/253 (40%), Gaps = 21/253 (8%)
Query: 162 LLQESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNT 221
+++ S+N + S+ T P K HK + C +SP G ATG D ++KL
Sbjct: 4 IVRTSVNHAK-GSSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPK 62
Query: 222 HACNLEGQEVELTV------HDGTVRDVCFIEDTTNKTSLLVSGGAGDC-KIYVTDCIIG 274
+ G + H + D+ D ++++L+S +C K +
Sbjct: 63 VKQMISGDTQARPLIRTFYDHAEPINDL----DFHPRSTILISSAKDNCIKFFDFSKTTA 118
Query: 275 KTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKG-- 331
K + + +V S+ ++ G ++G+ +D+ T C P+ P G
Sbjct: 119 KRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCF----LPSNFPDSGVS 174
Query: 332 SAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRF-TPH-SSDVRSVRFSPGAYYLL 389
A+ + +G + + DG L D ++ ++ H S+V S F+ ++L
Sbjct: 175 GAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVL 234
Query: 390 TAGYDGRVVLADL 402
++G D V L ++
Sbjct: 235 SSGKDSTVKLWEI 247
Score = 39.9 bits (89), Expect = 0.003
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL--QRFTPH--SSDVRSVRFSPGAYYLL 389
V S++ PSG L+ G D L+DV + F S + VR+S +
Sbjct: 131 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYI 190
Query: 390 TAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
TA DG + L D G + S+ A +V SA + D LS+ D T LW I
Sbjct: 191 TASKDGAIRLFD--GVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 247
Score = 37.9 bits (84), Expect = 0.014
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 24 SSDSRPTFKPVTVLEDLQAVRCAEFHPNGKLYAVGSNTKTLRICSYPKIEDV 75
SS + P + T+ E VRCA F P+G +A G ++++ PK++ +
Sbjct: 15 SSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 66
Score = 31.5 bits (68), Expect = 1.2
Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 192 SIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTN 251
++ +++ P+G+ L G++ L NT+ C L + V G + V + +
Sbjct: 130 NVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGV-SGAINQVRY-----S 183
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGKTFQALS---GHSGHVLSLYNWGGAMFVSGSQDKTVR 308
T + + D I + D + K +++ G S +++ +S +D TV+
Sbjct: 184 STGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVK 243
Query: 309 FWDLRTGGCV 318
W++ +G V
Sbjct: 244 LWEIGSGRMV 253
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 44.8 bits (101), Expect = 1e-04
Identities = 59/274 (21%), Positives = 109/274 (39%), Gaps = 22/274 (8%)
Query: 141 VVMSLFDPLGFVSPVTNRAKQLLQESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSP 200
V S+ P + S T R + S+N + S+ T P K HK + C +SP
Sbjct: 76 VSSSVLLPSSYGSITTPRTASI-DFSVNHAK-GSSKTIPKHESKTLSEHKSVVRCARFSP 133
Query: 201 AGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTV------HDGTVRDVCFIEDTTNKTS 254
G ATG D ++KL + G + H + D+ D +++
Sbjct: 134 DGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPINDL----DFHPRST 189
Query: 255 LLVSGGAGDC-KIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDL 312
+L+S +C K + K + + +V S+ ++ G ++G+ +D+
Sbjct: 190 ILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDV 249
Query: 313 RTGGCVNIISPPAGQPSKG--SAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRF- 369
T C P+ P G A+ + +G + + DG L D ++ ++
Sbjct: 250 NTYQCF----LPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIG 305
Query: 370 TPH-SSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
H S+V S F+ ++L++G D V L ++
Sbjct: 306 NAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 339
Score = 39.9 bits (89), Expect = 0.003
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL--QRFTPH--SSDVRSVRFSPGAYYLL 389
V S++ PSG L+ G D L+DV + F S + VR+S +
Sbjct: 223 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYI 282
Query: 390 TAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
TA DG + L D G + S+ A +V SA + D LS+ D T LW I
Sbjct: 283 TASKDGAIRLFD--GVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 339
Score = 37.9 bits (84), Expect = 0.014
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 24 SSDSRPTFKPVTVLEDLQAVRCAEFHPNGKLYAVGSNTKTLRICSYPKIEDV 75
SS + P + T+ E VRCA F P+G +A G ++++ PK++ +
Sbjct: 107 SSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 158
Score = 31.5 bits (68), Expect = 1.2
Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 192 SIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTN 251
++ +++ P+G+ L G++ L NT+ C L + V G + V + +
Sbjct: 222 NVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGV-SGAINQVRY-----S 275
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGKTFQALS---GHSGHVLSLYNWGGAMFVSGSQDKTVR 308
T + + D I + D + K +++ G S +++ +S +D TV+
Sbjct: 276 STGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVK 335
Query: 309 FWDLRTGGCV 318
W++ +G V
Sbjct: 336 LWEIGSGRMV 345
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 44.4 bits (100), Expect = 2e-04
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 274 GKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG-GCVNIISPPAGQPSKGS 332
G+ +L GH+ V S+ + S S D +VR WD+ TG +N+ G
Sbjct: 262 GEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFC--------GK 313
Query: 333 AVASLAV-DPSGRLLVCGHDDGTCALHDVR--GSRA-LQRFTPHSSDVRSVRFSPGA-YY 387
A+ ++ V S L+ G D + D R G+ A + +F+ HSS + + ++ + ++
Sbjct: 314 ALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFH 373
Query: 388 LLTAGYDGRVVLADLQ 403
LL+A YDG+++L DL+
Sbjct: 374 LLSASYDGKIMLWDLR 389
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 44.0 bits (99), Expect = 2e-04
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 16/188 (8%)
Query: 274 GKTFQALSGHSGH-VLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPS-- 329
G T Q +S H G VL++ ++ + + D ++ W + +G + + Q S
Sbjct: 3 GGTIQ-ISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLT 61
Query: 330 -KGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSS------DVRSVRFS 382
G AV ++ PSG LL G D G + + S Q + H S DV +++S
Sbjct: 62 YHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWS 121
Query: 383 PGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKT 442
P YL++ D ++ D+ + + H V W P S S+D+T
Sbjct: 122 PDDAYLISGSVDNSCIIWDVNKGSVHQI----LDAHCHYVQGVAWDPLAKYVASLSSDRT 177
Query: 443 AVLWTIPP 450
++ P
Sbjct: 178 CRIYANKP 185
Score = 36.7 bits (81), Expect = 0.032
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 21/181 (11%)
Query: 189 HKGS-IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEV----ELTVHDGTVRDV 243
H G + + + P LLAT D +KL N+ + V LT H V +
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 244 CFIEDTTNKTSLLVSGGAGD----CKIYVTDCIIG-KTFQALSGHSGHVLSL-YNWGGAM 297
F + LL SG G K++ ++ K ++LS H VL L ++ A
Sbjct: 71 RF----SPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
+SGS D + WD+ G I+ + V +A DP + + D TC +
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILD------AHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Query: 358 H 358
+
Sbjct: 181 Y 181
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 188 HHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQ-EVELTVHDGTVRDVCFI 246
+H ++ + +SP+G+LLA+G++ + + + N + L+ H V D+ +
Sbjct: 62 YHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWS 121
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG-SQDK 305
D + L+SG D + D G Q L H +V + A +V+ S D+
Sbjct: 122 PD----DAYLISGSV-DNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDR 176
Query: 306 TVRFW 310
T R +
Sbjct: 177 TCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 44.0 bits (99), Expect = 2e-04
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 16/188 (8%)
Query: 274 GKTFQALSGHSGH-VLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPS-- 329
G T Q +S H G VL++ ++ + + D ++ W + +G + + Q S
Sbjct: 3 GGTIQ-ISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLT 61
Query: 330 -KGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSS------DVRSVRFS 382
G AV ++ PSG LL G D G + + S Q + H S DV +++S
Sbjct: 62 YHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWS 121
Query: 383 PGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKT 442
P YL++ D ++ D+ + + H V W P S S+D+T
Sbjct: 122 PDDAYLISGSVDNSCIIWDVNKGSVHQI----LDAHCHYVQGVAWDPLAKYVASLSSDRT 177
Query: 443 AVLWTIPP 450
++ P
Sbjct: 178 CRIYANKP 185
Score = 36.7 bits (81), Expect = 0.032
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 21/181 (11%)
Query: 189 HKGS-IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEV----ELTVHDGTVRDV 243
H G + + + P LLAT D +KL N+ + V LT H V +
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 244 CFIEDTTNKTSLLVSGGAGD----CKIYVTDCIIG-KTFQALSGHSGHVLSL-YNWGGAM 297
F + LL SG G K++ ++ K ++LS H VL L ++ A
Sbjct: 71 RF----SPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
+SGS D + WD+ G I+ + V +A DP + + D TC +
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILD------AHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Query: 358 H 358
+
Sbjct: 181 Y 181
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 188 HHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQ-EVELTVHDGTVRDVCFI 246
+H ++ + +SP+G+LLA+G++ + + + N + L+ H V D+ +
Sbjct: 62 YHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWS 121
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG-SQDK 305
D + L+SG D + D G Q L H +V + A +V+ S D+
Sbjct: 122 PD----DAYLISGSV-DNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDR 176
Query: 306 TVRFW 310
T R +
Sbjct: 177 TCRIY 181
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 300 SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHD 359
S D R WDLRT + I Q V S+ P+G L G +D C + D
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQ------VLSVDFSPNGYHLASGGEDNQCRIWD 200
Query: 360 VRGSRALQRFTPHSSDVRSVRFSP-GAYYLLTAGYDGRV 397
+R + L H + V V++ P Y+L TA +D V
Sbjct: 201 LRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNV 239
Score = 41.9 bits (94), Expect = 8e-04
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 352 DGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLP 411
D + D+R +R + F H V SV FSP Y+L + G D + + DL+ + L
Sbjct: 151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR--MRKLLY 208
Query: 412 SVPVARHPDKVISARWHPDDFSFLST-SADKTAVLWT 447
+P H + V ++ P + FL+T S D +W+
Sbjct: 209 IIPA--HVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 268 VTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAG 326
V D + GH VLS+ ++ G SG +D R WDLR + II
Sbjct: 156 VWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII----- 210
Query: 327 QPSKGSAVASLAVDPSGR-LLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSV 379
P+ + V+ + +P R L D + R ++ H S V S+
Sbjct: 211 -PAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 44.0 bits (99), Expect = 2e-04
Identities = 64/237 (27%), Positives = 94/237 (39%), Gaps = 26/237 (10%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGD-LLATGSNDKTVKLMAFNTHACNLEGQEVEL 233
AP AP V + ++Y + WS + D +L D +VK+ ++T
Sbjct: 45 APGAPGVTESVSYDTADAVYDVCWSESHDSVLIAAIGDGSVKI--YDTALPPPSNPIRSF 102
Query: 234 TVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIG-KTFQALSGHSGHVLSLYN 292
H V+ V + + T + S L S K++ D +TF+ H +Y
Sbjct: 103 QEHAREVQSVDY--NPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKE------HAYCVYQ 154
Query: 293 --WG---GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLL 346
W G +F S S D T+R WD+R G II P+ + S + +L
Sbjct: 155 AVWNPKHGDVFASASGDCTLRIWDVREPGSTMII------PAHDFEILSCDWNKYDDCIL 208
Query: 347 VCGHDDGTCALHDVRGSRA-LQRFTPHSSDVRSVRFSPGAYYLL-TAGYDGRVVLAD 401
D T + DVR R L H VR V+FSP L+ + YD V L D
Sbjct: 209 ATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 43.6 bits (98), Expect = 3e-04
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 18/193 (9%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQE----VELTVHD 237
LLK+ H S+ CL +S LL +GS D ++++ + + + Q+ E ++
Sbjct: 112 LLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNE 171
Query: 238 GTVRDVCFIEDTTNKTSLLVSGGAG-DCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGA 296
T+ + D ++++S CK++ GK + + S + GG
Sbjct: 172 HTMSVTDIVIDYGGCNAVIISSSEDRTCKVW--SLSRGKLLKNIIFPSVINALALDPGGC 229
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQ-----PSKGSAVASLAVDPSGRLLVCGHD 351
+F +G++D + G +N S Q KG A+ LA G LL+ G +
Sbjct: 230 VFYAGARDSKIYI------GAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSE 283
Query: 352 DGTCALHDVRGSR 364
DG + D + R
Sbjct: 284 DGVVCVWDPKSLR 296
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 43.6 bits (98), Expect = 3e-04
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 300 SGSQDKTVRFWDLRTGGCVNIISPPAGQPS-----KGSAVASLAVDPSGRLLVCGHDDGT 354
+G+ D ++FWD+R + P P+ + + SL+ D SG L D
Sbjct: 256 AGAPDSALKFWDIRKLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTYLTASCKDNR 315
Query: 355 CALHD-VRGSRA-LQRFTPHSSDVRSVR--FSPGAYYLLTAGYDGRVVLADLQGDLTCPL 410
L++ +R + +Q F+ D VR SP Y+L+ DG + + P
Sbjct: 316 IYLYNTLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDP- 374
Query: 411 PSVPVARHPDKVISARWHPDDFSFLSTSADK-TAVLWTI 448
+ + H +V + W P + ++T++D T LW I
Sbjct: 375 --IILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNI 411
Score = 36.7 bits (81), Expect = 0.032
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H +I+ ++W L T S D+T+K+ + C L H GTV+ +C
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCT-----GVLIGHTGTVKSMC--SH 179
Query: 249 TTNKTSLLVSGGAGDC 264
TN + LLVSG C
Sbjct: 180 PTN-SDLLVSGSRDGC 194
Score = 35.9 bits (79), Expect = 0.055
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 210 NDKTVKLMAFNTHACNLEGQEV-ELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYV 268
N + K + TH N E + H + D+ +I+ + LL + +GD I V
Sbjct: 100 NSSSKKFASSATHQENTEKARFRDWIAHYNAIFDISWIK---GDSCLLTA--SGDQTIKV 154
Query: 269 TDCIIGKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDKTVRFWDLR 313
D K L GH+G V S+ + + VSGS+D WDLR
Sbjct: 155 WDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLR 201
Score = 35.1 bits (77), Expect = 0.097
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 294 GGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGR-LLVCGHDD 352
G + ++ S D+T++ WD+ C ++ G V S+ P+ LLV G D
Sbjct: 139 GDSCLLTASGDQTIKVWDVEENKCTGVLIGHTG------TVKSMCSHPTNSDLLVSGSRD 192
Query: 353 GTCALHDVR--GSRALQRFTPHSSD-VRSVRFSP 383
G AL D+R S + F +S+ V+ SP
Sbjct: 193 GCFALWDLRCKSSSHKEEFCINSTGMVKGAHLSP 226
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 43.6 bits (98), Expect = 3e-04
Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 17/210 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HK + A+S L TG +K +++ N L+ E+ G++R + ++
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMN----RLDAPPTEVDKSPGSIRTLTWLH- 155
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVR 308
+++T L G +++ D GK Q L S + + G +++ + TV+
Sbjct: 156 -SDQTILSSCTDIGGVRLW--DVRSGKIVQTLETKSPVTSAEVSQDGR-YITTADGSTVK 211
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHDVRGSRALQ 367
FWD G V P + S +++P SG V G +D + D +
Sbjct: 212 FWDANHFGLVKSYDMPCN-------IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIG 264
Query: 368 RFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
H V VRF+P + DG +
Sbjct: 265 CNKGHHGPVHCVRFTPTGLSYASGSEDGTI 294
Score = 31.9 bits (69), Expect = 0.90
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQE 230
K H G ++C+ ++P G A+GS D T+++ + T N E E
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRI--WQTTPANPEENE 308
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 257 VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFW 310
V+GG D + V D G+ GH G V + + G + SGS+D T+R W
Sbjct: 244 VAGGE-DMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 43.6 bits (98), Expect = 3e-04
Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 17/210 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HK + A+S L TG +K +++ N L+ E+ G++R + ++
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMN----RLDAPPTEVDKSPGSIRTLTWLH- 155
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVR 308
+++T L G +++ D GK Q L S + + G +++ + TV+
Sbjct: 156 -SDQTILSSCTDIGGVRLW--DVRSGKIVQTLETKSPVTSAEVSQDGR-YITTADGSTVK 211
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHDVRGSRALQ 367
FWD G V P + S +++P SG V G +D + D +
Sbjct: 212 FWDANHFGLVKSYDMPCN-------IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIG 264
Query: 368 RFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
H V VRF+P + DG +
Sbjct: 265 CNKGHHGPVHCVRFTPTGLSYASGSEDGTI 294
Score = 31.9 bits (69), Expect = 0.90
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQE 230
K H G ++C+ ++P G A+GS D T+++ + T N E E
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRI--WQTTPANPEENE 308
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 257 VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFW 310
V+GG D + V D G+ GH G V + + G + SGS+D T+R W
Sbjct: 244 VAGGE-DMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 43.2 bits (97), Expect = 4e-04
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 334 VASLAVDPSG--RLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
V S A P+ R+ CG +D +D + HS+ V +R+SP +T
Sbjct: 11 VLSCAFKPTRPFRIATCG-EDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITV 69
Query: 392 GYDGRVVLADLQ-GDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
D + ++ D + GD L S H + + W PD L+ SADK+A +W +
Sbjct: 70 SSDKKGMIYDGKTGDKVGELASED--GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEV 125
Score = 35.5 bits (78), Expect = 0.073
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 331 GSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQR---FTPHSSDVRSVRFSPGAYY 387
G AVA+ + P G+ + G DG ++ V G L+ H + +R+SP
Sbjct: 311 GFAVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTM 370
Query: 388 LLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWT 447
+ + V+ D + T + + H ++ S W P++ + S D +++
Sbjct: 371 FASGDANREAVVWDRE---TKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYE 427
Query: 448 I 448
+
Sbjct: 428 V 428
Score = 35.1 bits (77), Expect = 0.097
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 181 VLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTV 240
V L H I LAWSP ++ATGS D V + + A + H G V
Sbjct: 390 VKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPA---SSRITARNAHLGGV 446
Query: 241 RDVCFIEDTTNKTS 254
V FI+D T +S
Sbjct: 447 NAVAFIDDCTVASS 460
Score = 34.3 bits (75), Expect = 0.17
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKL 216
HKGSIY ++WSP + T S DK+ K+
Sbjct: 95 HKGSIYAVSWSPDSKRVLTVSADKSAKV 122
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 43.2 bits (97), Expect = 4e-04
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 274 GKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGS 332
GKT LSGH S ++ G F +G+QDKT R WD+R N+ A
Sbjct: 307 GKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIR-----NLSKSVAVLRGNLG 361
Query: 333 AVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
A+ S+ G+ + ++DV ++ ++ + FSP L
Sbjct: 362 AIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGV 421
Query: 393 YD 394
+D
Sbjct: 422 WD 423
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
H D ++ WHPD F+F + + DKT +W I
Sbjct: 316 HLDFSFASAWHPDGFTFSTGNQDKTCRVWDI 346
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 42.7 bits (96), Expect = 5e-04
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 350 HDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCP 409
+ D C H + S+ Q H+ +V ++FS YL ++ D ++ ++ D
Sbjct: 252 YSDHQCGKHQIP-SQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHIS 310
Query: 410 LPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
L V H VI+ W PDD L+ A++ W +
Sbjct: 311 LKHTLVGHHKP-VIAILWSPDDRQVLTCGAEEVIRRWDV 348
Score = 36.7 bits (81), Expect = 0.032
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 214 VKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNK-TSLLVSGGAGDCKIYVTDCI 272
V L+ N+EG ++ + G R I ++ G+ D ++Y+
Sbjct: 460 VNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRS 519
Query: 273 IGKTFQALSGHSGHVLSLYNWGGA---MFVSGSQDKTVRFWDL 312
GK L GH+G V + +W M S S D T+R W L
Sbjct: 520 TGKLIVELPGHAGAV-NCVSWSPTNLHMLASASDDGTIRIWGL 561
Score = 31.5 bits (68), Expect = 1.2
Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 189 HKGSIYCLAWSPAG-DLLATGSNDKTVKL 216
H G++ C++WSP +LA+ S+D T+++
Sbjct: 530 HAGAVNCVSWSPTNLHMLASASDDGTIRI 558
Score = 31.1 bits (67), Expect = 1.6
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 4/134 (2%)
Query: 272 IIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSK 330
I +T Q L H+ V L ++ G S S+D+T W++ G +++ G
Sbjct: 262 IPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHK- 320
Query: 331 GSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLT 390
+A L ++L CG ++ DV + + S + P ++
Sbjct: 321 -PVIAILWSPDDRQVLTCGAEE-VIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIA 378
Query: 391 AGYDGRVVLADLQG 404
D + + DL G
Sbjct: 379 GMTDRSICMWDLDG 392
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 42.7 bits (96), Expect = 5e-04
Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSG--HVLSLYNWGGAMFVSGSQDKTVRFWDLR 313
+V+ G+ D K+ V D GK + H H ++ N+ + +SGS+D+TV D R
Sbjct: 229 IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGR 288
Query: 314 TGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHDVRGSRALQRFT-- 370
S + S + V LA DP S V DGT D R S F
Sbjct: 289 DP------SNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIH 342
Query: 371 PHSSDVRSVRFSPGAYYLLTAG-YDGRVVLADLQGD 405
H S+V S+ ++ A LL G D V L DL +
Sbjct: 343 AHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNN 378
Score = 41.5 bits (93), Expect = 0.001
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 291 YNWGGAMFV-SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCG 349
+NW V SGS+DK V+ WD+ TG C + K AVA P +L+ G
Sbjct: 222 FNWENRNIVASGSEDKKVKVWDVATGKCKVTME---HHEKKVHAVAWNNYTP--EVLLSG 276
Query: 350 HDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY-DGRVVLADLQ-GDLT 407
D T L D R + V + + P + + DG V D + DL+
Sbjct: 277 SRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLS 336
Query: 408 CPLPSVPVARHPDKVISARWHPDDFSFLST-SADKTAVLWTI 448
PS + H +V S ++ + L+T SAD++ LW +
Sbjct: 337 ---PSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDL 375
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 42.7 bits (96), Expect = 5e-04
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQ-EVELTVHDGTVRDVCFIE 247
H+G+++ + +S LA+G D+ + + + C L E LT ++ D E
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHV--WEVQECELMSMNEGSLTPIHPSLCDSSGNE 460
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCI---------IGKTFQALSGHSGHVLSLYNWGGA-M 297
T + G +G ++ D + K +L GH +L L +W + +
Sbjct: 461 ITVVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDL-SWSKSQL 519
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIIS 322
+S S DKTVR WD+ T C+ + +
Sbjct: 520 LLSSSMDKTVRLWDIETKTCLKLFA 544
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 329 SKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPH 372
S G V SL P G+ + G +DGT +LHDV + L+ PH
Sbjct: 62 SPGKPVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPH 105
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.9 bits (94), Expect = 8e-04
Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 21/209 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTH--ACNLEGQEVELTVHDGTVR----D 242
H GSI + +SP G +A+ D V++ + E EV+ V+ G + +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 243 VCFI--EDTTNKTSLLVSGGAGDCKIYVTDC--IIGKTFQALSGHSGHVLSLYNWGGAMF 298
I E T K+S L C + I K GH G +L L +W +
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDL-SWSEKGY 335
Query: 299 V-SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCA 356
+ S S D+TVR W + C+ + + V +A +P + G DG
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTF-------THNNFVTCVAFNPVDDNYFISGSIDGKVR 388
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGA 385
+ DV R + +T V +V + P A
Sbjct: 389 IWDVTRCRVVD-YTDIRDIVTAVCYRPDA 416
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 144 SLFDPLGFVSPVTNRAKQLLQESINLFRDNSAPTAPTVL---LKRTKHHKGSIYCLAWSP 200
S +PL + T + L++S + PT ++ L K H G I L+WS
Sbjct: 273 SQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSE 332
Query: 201 AGDLLATGSNDKTVKLMAFNTHAC 224
G LL++ S D+TV+L C
Sbjct: 333 KGYLLSS-SVDETVRLWRVGCDEC 355
Score = 28.7 bits (61), Expect = 8.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYD 394
Q F+ H + +++FSP Y+ +AG D
Sbjct: 212 QEFSAHDGSILAMKFSPDGKYIASAGED 239
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.9 bits (94), Expect = 8e-04
Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 21/209 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTH--ACNLEGQEVELTVHDGTVR----D 242
H GSI + +SP G +A+ D V++ + E EV+ V+ G + +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 243 VCFI--EDTTNKTSLLVSGGAGDCKIYVTDC--IIGKTFQALSGHSGHVLSLYNWGGAMF 298
I E T K+S L C + I K GH G +L L +W +
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDL-SWSEKGY 335
Query: 299 V-SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCA 356
+ S S D+TVR W + C+ + + V +A +P + G DG
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTF-------THNNFVTCVAFNPVDDNYFISGSIDGKVR 388
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGA 385
+ DV R + +T V +V + P A
Sbjct: 389 IWDVTRCRVVD-YTDIRDIVTAVCYRPDA 416
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 144 SLFDPLGFVSPVTNRAKQLLQESINLFRDNSAPTAPTVL---LKRTKHHKGSIYCLAWSP 200
S +PL + T + L++S + PT ++ L K H G I L+WS
Sbjct: 273 SQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSE 332
Query: 201 AGDLLATGSNDKTVKLMAFNTHAC 224
G LL++ S D+TV+L C
Sbjct: 333 KGYLLSS-SVDETVRLWRVGCDEC 355
Score = 28.7 bits (61), Expect = 8.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYD 394
Q F+ H + +++FSP Y+ +AG D
Sbjct: 212 QEFSAHDGSILAMKFSPDGKYIASAGED 239
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 41.5 bits (93), Expect = 0.001
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 262 GDCKIYVTDCIIGKTFQALSGH--SGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVN 319
GD + + DC GK + L+GH + V+ + + SGS D VR W+ +TG C+
Sbjct: 123 GDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIR 182
Query: 320 IISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG--SRALQRFTPHSSDVR 377
+ +P +AS+A G LL H +G A +R
Sbjct: 183 --THDFYRP-----IASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLKTRRSLR 235
Query: 378 SVRFSP-GAYYLLTA 391
+V F P G LLTA
Sbjct: 236 AVHFHPHGVPLLLTA 250
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP 383
P P + + A+ + D GR L H D T + D + L+ T H VRF P
Sbjct: 98 PLVPPPRSTIAAAFSSD--GRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHP 155
Query: 384 GAYYLLTAG 392
++ +G
Sbjct: 156 RHSEIVASG 164
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 41.5 bits (93), Expect = 0.001
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 262 GDCKIYVTDCIIGKTFQALSGH--SGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVN 319
GD + + DC GK + L+GH + V+ + + SGS D VR W+ +TG C+
Sbjct: 123 GDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIR 182
Query: 320 IISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG--SRALQRFTPHSSDVR 377
+ +P +AS+A G LL H +G A +R
Sbjct: 183 --THDFYRP-----IASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLKTRRSLR 235
Query: 378 SVRFSP-GAYYLLTA 391
+V F P G LLTA
Sbjct: 236 AVHFHPHGVPLLLTA 250
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP 383
P P + + A+ + D GR L H D T + D + L+ T H VRF P
Sbjct: 98 PLVPPPRSTIAAAFSSD--GRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHP 155
Query: 384 GAYYLLTAG 392
++ +G
Sbjct: 156 RHSEIVASG 164
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 268 VTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAG 326
+ D G+T L GH + S ++ G F +G+QDKT R WD R + A
Sbjct: 303 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTR-----KLSESVAV 357
Query: 327 QPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAY 386
AV S+ GR + ++D + ++ ++ + FSP
Sbjct: 358 LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTE 417
Query: 387 YLLTAGYD 394
L +D
Sbjct: 418 SLFIGVWD 425
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLW 446
H D ++ WHP+ +F + + DKT +W
Sbjct: 318 HLDYSFASAWHPNGVTFATGNQDKTCRIW 346
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H + AW P G ATG+ DKT ++ ++T L L + G VR + F
Sbjct: 316 KGHLDYSFASAWHPNGVTFATGNQDKTCRI--WDTR--KLSESVAVLKGNLGAVRSIRFT 371
Query: 247 ED 248
D
Sbjct: 372 SD 373
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 268 VTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAG 326
+ D G+T L GH + S ++ G F +G+QDKT R WD R + A
Sbjct: 297 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTR-----KLSESVAV 351
Query: 327 QPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAY 386
AV S+ GR + ++D + ++ ++ + FSP
Sbjct: 352 LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTE 411
Query: 387 YLLTAGYD 394
L +D
Sbjct: 412 SLFIGVWD 419
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLW 446
H D ++ WHP+ +F + + DKT +W
Sbjct: 312 HLDYSFASAWHPNGVTFATGNQDKTCRIW 340
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H + AW P G ATG+ DKT ++ ++T L L + G VR + F
Sbjct: 310 KGHLDYSFASAWHPNGVTFATGNQDKTCRI--WDTR--KLSESVAVLKGNLGAVRSIRFT 365
Query: 247 ED 248
D
Sbjct: 366 SD 367
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAF-----NTHACNLEGQE---VEL-TVHDGT 239
HKGSI+ + +S G LA+ D +++ +++ QE + L + +G+
Sbjct: 362 HKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLANGS 421
Query: 240 VRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIG---KTFQALSGHSGHVLSLYNWGGA 296
V +TS + D + V + + G K + GH VL L +W +
Sbjct: 422 PEPVSMSPKRRGRTSFSRKSVSLD-NVLVPEAVFGLSEKPVCSFVGHLDDVLDL-SWSKS 479
Query: 297 M-FVSGSQDKTVRFWDLRTGGCVNIIS 322
+S S DKTVR WDL + C+ + S
Sbjct: 480 QHLLSSSMDKTVRLWDLSSKTCLKVFS 506
Score = 36.3 bits (80), Expect = 0.042
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 369 FTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWH 428
F H DV + +S + +LL++ D V L DL TC + V H D V +++
Sbjct: 464 FVGHLDDVLDLSWSK-SQHLLSSSMDKTVRLWDLSSK-TC----LKVFSHSDYVTCIQFN 517
Query: 429 P-DDFSFLSTSADKTAVLWTIP 449
P DD F+S S D +W+IP
Sbjct: 518 PVDDNYFISGSLDAKVRIWSIP 539
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 243 VCFIEDTTNKTSLLVSGGAGDCKIYV-TDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG 301
VC ++ T + + + G +++ T C K + + GH + W + SG
Sbjct: 218 VCSVQWTREGSYISIGTSHGQVQVWDGTQC---KRVRTMGGHQTRT-GVLAWNSRILSSG 273
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
S+D+ + D+R + +S G S+ V L R L G +D + +
Sbjct: 274 SRDRNILQHDIRVQS--DFVSKLVGHKSE---VCGLKWSHDDRELASGGNDNQLLVWNNH 328
Query: 362 GSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
+ + + T H++ V+++ +SP LL +G
Sbjct: 329 SQQPILKLTEHTAAVKAITWSPHQSSLLASG 359
Score = 39.1 bits (87), Expect = 0.006
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 182 LLKRTKHHKGSIYCLAWSP-AGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTV 240
+LK T+H ++ + WSP LLA+G + +NT G ++ ++ G+
Sbjct: 333 ILKLTEH-TAAVKAITWSPHQSSLLASGGGTADRCIRFWNT----TNGNQLN-SIDTGS- 385
Query: 241 RDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNW-GGAMFV 299
VC + + N ++ + G +I + L+GHS VL L G V
Sbjct: 386 -QVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIV 444
Query: 300 SGSQDKTVRFWDL 312
+G+ D+T+RFW++
Sbjct: 445 TGAGDETLRFWNV 457
Score = 29.9 bits (64), Expect = 3.6
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 26/213 (12%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+ LAW+ +L++GS D+ + H ++ V V G +VC ++
Sbjct: 256 HQTRTGVLAWNSR--ILSSGSRDRNIL-----QHDIRVQSDFVSKLV--GHKSEVCGLKW 306
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWG---GAMFVSG--SQ 303
+ + L + G D ++ V + + L+ H+ V ++ W ++ SG +
Sbjct: 307 SHDDREL--ASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAI-TWSPHQSSLLASGGGTA 363
Query: 304 DKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVC--GHDDGTCALHDVR 361
D+ +RFW+ G +N I GS V +LA + +V G+ L
Sbjct: 364 DRCIRFWNTTNGNQLNSI-------DTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYP 416
Query: 362 GSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYD 394
+ T HS V + SP ++T D
Sbjct: 417 SMSKVATLTGHSMRVLYLATSPDGQTIVTGAGD 449
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 278 QALSGHSGHVLSL-YNWGGA-MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q GHS +V+ + +N F S S D+T++ W+L G + A Q KG
Sbjct: 136 QIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL--GSPDPNFTLDAHQ--KGVNCV 191
Query: 336 SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDG 395
L+ G DD T + D + +Q H+ +V +V F P ++T DG
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 396 RV 397
V
Sbjct: 252 TV 253
Score = 37.9 bits (84), Expect = 0.014
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
V S P + +V G DD +++ ++ F HS +R V P Y+L++
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 394 DGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF-SFLSTSADKTAVLWTI 448
D + L D + C + H V+ ++P D +F S S D+T +W +
Sbjct: 120 DMLIKLWDWENGWAC---TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
Score = 33.5 bits (73), Expect = 0.29
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 206 ATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCK 265
A+ S D+T+K+ NL + T+ D + V ++ T + G+ D
Sbjct: 159 ASASLDRTIKIW-------NLGSPDPNFTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
Query: 266 IYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPP 324
V D Q L GH+ +V ++ ++ + ++GS+D TVR W T N ++
Sbjct: 211 AKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
Query: 325 AGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
V ++ S R +V G+D+GT
Sbjct: 271 L------ERVWAIGYIKSSRRVVIGYDEGT 294
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 278 QALSGHSGHVLSL-YNWGGA-MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q GHS +V+ + +N F S S D+T++ W+L G + A Q KG
Sbjct: 136 QIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL--GSPDPNFTLDAHQ--KGVNCV 191
Query: 336 SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDG 395
L+ G DD T + D + +Q H+ +V +V F P ++T DG
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 396 RV 397
V
Sbjct: 252 TV 253
Score = 37.9 bits (84), Expect = 0.014
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
V S P + +V G DD +++ ++ F HS +R V P Y+L++
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 394 DGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF-SFLSTSADKTAVLWTI 448
D + L D + C + H V+ ++P D +F S S D+T +W +
Sbjct: 120 DMLIKLWDWENGWAC---TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
Score = 33.5 bits (73), Expect = 0.29
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 206 ATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCK 265
A+ S D+T+K+ NL + T+ D + V ++ T + G+ D
Sbjct: 159 ASASLDRTIKIW-------NLGSPDPNFTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
Query: 266 IYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPP 324
V D Q L GH+ +V ++ ++ + ++GS+D TVR W T N ++
Sbjct: 211 AKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
Query: 325 AGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
V ++ S R +V G+D+GT
Sbjct: 271 L------ERVWAIGYIKSSRRVVIGYDEGT 294
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 278 QALSGHSGHVLSL-YNWGGA-MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q GHS +V+ + +N F S S D+T++ W+L G + A Q KG
Sbjct: 136 QIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL--GSPDPNFTLDAHQ--KGVNCV 191
Query: 336 SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDG 395
L+ G DD T + D + +Q H+ +V +V F P ++T DG
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 396 RV 397
V
Sbjct: 252 TV 253
Score = 37.9 bits (84), Expect = 0.014
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY 393
V S P + +V G DD +++ ++ F HS +R V P Y+L++
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 394 DGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDF-SFLSTSADKTAVLWTI 448
D + L D + C + H V+ ++P D +F S S D+T +W +
Sbjct: 120 DMLIKLWDWENGWAC---TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
Score = 33.5 bits (73), Expect = 0.29
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 206 ATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCK 265
A+ S D+T+K+ NL + T+ D + V ++ T + G+ D
Sbjct: 159 ASASLDRTIKIW-------NLGSPDPNFTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
Query: 266 IYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPP 324
V D Q L GH+ +V ++ ++ + ++GS+D TVR W T N ++
Sbjct: 211 AKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
Query: 325 AGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
V ++ S R +V G+D+GT
Sbjct: 271 L------ERVWAIGYIKSSRRVVIGYDEGT 294
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 41.1 bits (92), Expect = 0.001
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 15/211 (7%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFN------THACNLEGQEVELTVHDGTVRD 242
H G+++C S L TGS D+T KL T + V+ +V D
Sbjct: 78 HSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLA-- 135
Query: 243 VCFIEDTTNKTSLL-VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG 301
V + +S + V A D + V D ++ Q+ G +++ VSG
Sbjct: 136 VITTDHFVGTSSAIHVKRIAEDPEDQVGDSVL--VLQSPDGKKKINRAVWGPLNQTIVSG 193
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
+D +R WD TG + G A+ SL + G D T L D+R
Sbjct: 194 GEDAAIRIWDAETGKLLKQSDEEVGHK---EAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
Query: 362 GSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
++ +T V +V SP +++ G
Sbjct: 251 TLTLIKTYTT-VVPVNAVAMSPLLNHVVLGG 280
Score = 36.7 bits (81), Expect = 0.032
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 18/185 (9%)
Query: 274 GKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGS 332
G+ GHSG V + + ++GS D+T + WD+++G + + G P++
Sbjct: 69 GERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSG--KELFTFKFGAPARS- 125
Query: 333 AVASLAVDPSGRLLVCGHDDGT-CALH---------DVRGSRALQRFTPH-SSDVRSVRF 381
+V ++ H GT A+H D G L +P + +
Sbjct: 126 --VDFSVGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVW 183
Query: 382 SPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADK 441
P +++ G D + + D + V H + + S DD FL+ S DK
Sbjct: 184 GPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVG-HKEAITSLCKAADDSHFLTGSHDK 242
Query: 442 TAVLW 446
TA LW
Sbjct: 243 TAKLW 247
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLE 227
K H G I LA+SP G ++G D V+L F+++ N++
Sbjct: 314 KGHFGPINALAFSPDGKSFSSGGEDGYVRLHHFDSNYFNIK 354
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 329 SKGSAVASLAVDPSG-RLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP-GAY 386
S A+ SL+ P+ + L G D G + D+R +++ + H + S+ F+P +
Sbjct: 303 STDEAIFSLSQRPNDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPH 362
Query: 387 YLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSAD 440
+ T+ DG L DL+ ++ H V SA + P S +TS D
Sbjct: 363 VMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLATTSLD 416
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 334 VASLAVDPSG-RLLVCGHDDGTCALHDVRGSRALQRFT----PHSSDVRSVRFSPGAYYL 388
+ S+ +P ++ DGT L D+R A + T HS V S FSP L
Sbjct: 351 INSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSL 410
Query: 389 LTAGYDGRV-VLADLQGDLTCPLPSVPVARHPDKVISARWHPDD 431
T D + VL+ + TC + +R K A W DD
Sbjct: 411 ATTSLDNYIGVLSGANFENTCMIYHNNTSRWISK-FKAVWGWDD 453
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 369 FTPHSSDVRSVRFSPGAY-YLLTAGYDGRVVLADLQ 403
FTPHS+ V S+ F + ++++ YDG + L D++
Sbjct: 259 FTPHSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVE 294
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 278 QALSGHSGHVLSL-YNWGGA-MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q GHS +V+ + +N F S S D+T++ W+L G + A Q KG
Sbjct: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL--GSPDPNFTLDAHQ--KGVNCV 191
Query: 336 SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDG 395
L+ G DD T + D + +Q H+ +V +V F P ++T DG
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 396 RV 397
V
Sbjct: 252 TV 253
Score = 36.3 bits (80), Expect = 0.042
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 346 LVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
+V G DD +++ ++ F HS +R V P Y+L++ D + L D +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
Query: 406 LTCPLPSVPVARHPDKVISARWHPDDF-SFLSTSADKTAVLWTI 448
C + H V+ ++P D +F S S D+T +W +
Sbjct: 132 WAC---TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Score = 33.5 bits (73), Expect = 0.29
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 206 ATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCK 265
A+ S D+T+K+ NL + T+ D + V ++ T + G+ D
Sbjct: 159 ASASLDRTIKIW-------NLGSPDPNFTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
Query: 266 IYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPP 324
V D Q L GH+ +V ++ ++ + ++GS+D TVR W T N ++
Sbjct: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
Query: 325 AGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
V ++ S R +V G+D+GT
Sbjct: 271 L------ERVWAIGYIKSSRRVVIGYDEGT 294
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 40.7 bits (91), Expect = 0.002
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 196 LAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSL 255
L +S D L S DK V+L +T++ L+G+ +H G V D CF +D +
Sbjct: 23 LRFSNNSDHLLVSSWDKRVRLYDVSTNS--LKGE----FLHGGAVLDCCFHDDFSG---- 72
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLR 313
S GA D K+ +GK L H V + Y++ ++GS DKTV+ WD R
Sbjct: 73 -FSVGA-DYKVRRIVFNVGKE-DILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWDPR 128
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 40.7 bits (91), Expect = 0.002
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 236 HDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWG 294
H+G VR V F N L VSGG D KI V + + L GH ++ ++ ++
Sbjct: 50 HEGPVRGVHF----HNSQPLFVSGG-DDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHE 104
Query: 295 GAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
VS S D+T+R W+ ++ CV++++
Sbjct: 105 YPWIVSASDDQTIRIWNWQSRTCVSVLT 132
Score = 39.5 bits (88), Expect = 0.004
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
++ WD R G ++ G P +G + S L V G DD + + + R L
Sbjct: 33 IQLWDYRMGTLIDRFDEHEG-PVRG-----VHFHNSQPLFVSGGDDYKIKVWNYKNHRCL 86
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISAR 426
H +R+V+F ++++A D + + + Q TC SV + H V+ A
Sbjct: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR-TCV--SV-LTGHNHYVMCAS 142
Query: 427 WHPDDFSFLSTSADKTAVLWTI 448
+HP + +S S D+T +W I
Sbjct: 143 FHPKEDLVVSASLDQTVRVWDI 164
Score = 34.3 bits (75), Expect = 0.17
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
L+ R H+G + + + + L +G +D +K+ + H C L H +R
Sbjct: 43 LIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLF-----TLLGHLDYIR 97
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVS 300
V F ++ +VS + D I + + L+GH+ +V+ + ++ + VS
Sbjct: 98 TVQF----HHEYPWIVS-ASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVS 152
Query: 301 GSQDKTVRFWDL 312
S D+TVR WD+
Sbjct: 153 ASLDQTVRVWDI 164
Score = 32.3 bits (70), Expect = 0.68
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQA--LSGHSGHVLS-LYNWGGAMFVSGSQDKTVRFWDL 312
L+ GA D ++ + K ++ L GH +V S +++ + VS S+DK++R WD
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Query: 313 RTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
+ + LAV P LL GHD G
Sbjct: 278 TKRTGLQTFR------REHDRFWILAVHPEMNLLAAGHDSG 312
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 40.3 bits (90), Expect = 0.003
Identities = 60/274 (21%), Positives = 113/274 (41%), Gaps = 31/274 (11%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
+ K+ + HKG + ++++ GD+L +GS+D+ V L + V+L+ H G
Sbjct: 51 IYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQL-------GNVKLSFHSGHAN 103
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQA--LSGHSG--HVLSLYNWGGAM 297
+V + + A D + + G + L H G H L + +
Sbjct: 104 NVFQAKFMPFSDDRTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHI 163
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA----SLAVDP-SGRLLVCGHDD 352
F + +D V+ +DLRT + + + P + + A ++A+DP + L G +
Sbjct: 164 FYTCGEDGLVQRFDLRTEAPTELFTCRSVDPRRRNMDAIQLNAIAIDPRNSNLFAVGGME 223
Query: 353 GTCALHDVRG---------SRALQRF-TPH---SSDV--RSVRFSPGAYYLLTAGYDGRV 397
L+D+R +RA F PH + DV + FS + L++ +
Sbjct: 224 EYARLYDIRRFQGEGLNGFTRAADHFCPPHLIGNEDVGITGLAFSEQSELLVSYNDEFIY 283
Query: 398 VLADLQGDLTCPLPSVPVARHPDKVISARWHPDD 431
+ G + P+PS P+++ P + P D
Sbjct: 284 LFTPGMGLGSNPIPSSPISKSPVSKSESSSSPKD 317
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 39.9 bits (89), Expect = 0.003
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 174 SAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVEL 233
+A + P + T SI L++SP D+L S D V+ + +L
Sbjct: 9 TANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKAS 68
Query: 234 TVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNW 293
HD V + +D T + SGG D + + + G ++ H G + ++ W
Sbjct: 69 ISHDQPVLCSAWKDDGTT----VFSGGC-DKQAKMWPLLSGGQPVTVAMHEGPIAAMA-W 122
Query: 294 --GGAMFVSGSQDKTVRFWDLR 313
G + +GS DKT+++WD R
Sbjct: 123 IPGMNLLATGSWDKTLKYWDTR 144
Score = 35.9 bits (79), Expect = 0.055
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 370 TPHSSD-VRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVAR--HPDKVISAR 426
TP +D + S+ FSP A L+ +D +V ++ L S P A H V+ +
Sbjct: 21 TPSPADSISSLSFSPRADILVATSWDNQVRCWEISRS-GASLASAPKASISHDQPVLCSA 79
Query: 427 WHPDDFSFLSTSADKTAVLWTI 448
W D + S DK A +W +
Sbjct: 80 WKDDGTTVFSGGCDKQAKMWPL 101
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 351 DDGTCALHD-VRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCP 409
D TC + S ++ H S+V+SV ++ L T G D V + ++Q +
Sbjct: 69 DGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDE 128
Query: 410 LPSVPV-ARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
++ V H + V WHP S S D T +W
Sbjct: 129 FDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
Score = 32.7 bits (71), Expect = 0.51
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 12/130 (9%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE-LTVHDGTVRDVCFIE 247
H+ + ++W+ +G LLAT DK+V + E E + + V G DV +
Sbjct: 91 HESEVKSVSWNASGSLLATCGRDKSVWIWEIQPE----EDDEFDTIAVLTGHSEDVKMVL 146
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIG--KTFQALS----GHSGHVLSL-YNWGGAMFVS 300
L KI+ ++ G Q LS GHS V S+ +N G V+
Sbjct: 147 WHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVT 206
Query: 301 GSQDKTVRFW 310
S D V+ W
Sbjct: 207 CSDDLAVKIW 216
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 183 LKRTKHHKGSIYCLAWSPAGD-LLATGSNDKTVKL 216
+++ + H ++ +AW+PA D ++A+ S DKTV++
Sbjct: 13 VQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRI 47
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 39.5 bits (88), Expect = 0.004
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 278 QALSGHSGHVLSL-YNWGGA-MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q GHS +V+ + +N F S S D+T++ W+L + + KG
Sbjct: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHL----KGVNCV 191
Query: 336 SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDG 395
L+ G DD T + D + +Q H+ +V +V F P ++T DG
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDG 251
Query: 396 RV 397
V
Sbjct: 252 TV 253
Score = 31.1 bits (67), Expect = 1.6
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 206 ATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCK 265
A+ S D+T+K+ NL + T+ D ++ V ++ T + G+ D
Sbjct: 159 ASASLDRTIKIW-------NLGSPDPNFTL-DAHLKGVNCVDYFTGGDKPYLITGSDDHT 210
Query: 266 IYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRT 314
V D Q L GH+ +V ++ ++ + ++GS+D TVR W T
Sbjct: 211 AKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATT 260
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 39.5 bits (88), Expect = 0.004
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H ++ CL+ + LL + S D+TVK+ + C +E + HD V V
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKC-IE----SIKAHDDAVNSV----- 183
Query: 249 TTNKTSLLVSGGA-GDCKIYVTDCIIGK-----TFQALSGHSGHVLSLYNWGGAMFVSGS 302
T SL+ +G A G K++ + I GK FQ L V +L A++ SGS
Sbjct: 184 -TTAESLVFTGSADGTVKVWKRE-IRGKRTAHSLFQTLLKQESAVTALVTSHMAVY-SGS 240
Query: 303 QDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG 362
D V FW++ G ++ + K +A L + +G+LL G D + G
Sbjct: 241 SDGAVNFWEM---GDKKLLK--HCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWRREG 295
Query: 363 S--RALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVL 399
+ T H+ V+ + + G DGR+VL
Sbjct: 296 KVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVL 334
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 39.5 bits (88), Expect = 0.004
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 255 LLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVSGSQDKTVRFWDLR 313
L V G + +C I +D GK +L GH + S ++ G + +G+QD R WD+R
Sbjct: 263 LAVVGDSTECLI--SDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIR 320
Query: 314 TGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHS 373
N A A+ L P GR L + D + +
Sbjct: 321 -----NPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLF 375
Query: 374 SDVRSVRFSP 383
++ + FSP
Sbjct: 376 GEIAGISFSP 385
Score = 31.1 bits (67), Expect = 1.6
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 6/110 (5%)
Query: 340 DPSGRL-LVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVV 398
DPSG L L+ ++D + D + + F S V + SP L G +
Sbjct: 215 DPSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWS-VNNTSVSPDGKLLAVVGDSTECL 273
Query: 399 LADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
++D + H D ++ WHP+ + + D LW I
Sbjct: 274 ISDSHSGKVIS----SLRGHKDYSFASAWHPNGLILATGNQDTACRLWDI 319
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
++ + HK + AW P G +LATG+ D +L
Sbjct: 282 VISSLRGHKDYSFASAWHPNGLILATGNQDTACRL 316
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 39.1 bits (87), Expect = 0.006
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 288 LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLV 347
L+L +WG A ++ + TV WD +G +++ KG V S+ G L
Sbjct: 129 LNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTI---DEDKG-PVTSINWTQDGLDLA 184
Query: 348 CGHDDGTCALHDVRGSRALQRFT-PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDL 406
G D+ L D +R ++ H S V S+ + + L T G DG++V D++ +
Sbjct: 185 VGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWD--NHILTTGGMDGKIVNNDVR--I 240
Query: 407 TCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
+ + H ++V +W S D +W
Sbjct: 241 RSSIVETYLG-HTEEVCGLKWSESGNKQASGGNDNVVHIW 279
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGH--DDGTCALH 358
G D ++FW+ TG C+N + GS V SL S R L+ H L
Sbjct: 321 GVGDGKIKFWNTHTGACLNSV-------ETGSQVCSLLWSQSERELLSSHGFTQNQLTLW 373
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
+ H+S V + SP + +A D + L ++ G+
Sbjct: 374 KYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 39.1 bits (87), Expect = 0.006
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 15/211 (7%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFN------THACNLEGQEVELTVHDGTVRD 242
H G+++C S L TGS D+T KL T N + V+ V D
Sbjct: 51 HNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLA-- 108
Query: 243 VCFIEDTTNKTSLL-VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG 301
V + ++T+ + V A D + + ++ G +++ VSG
Sbjct: 109 VITTDHFVDRTAAIHVKRIAEDPEEQDAESVL--VLHCPDGKKRINRAVWGPLNQTIVSG 166
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
+DK +R WD TG + G +++ A D + G D T L D+R
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH---FLTGSLDKTAKLWDMR 223
Query: 362 GSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
L+ +T V +V SP +++ G
Sbjct: 224 TLTLLKTYTT-VVPVNAVSLSPLLNHVVLGG 253
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLE 227
K H G I LA++P G ++G D V+L F++ N++
Sbjct: 287 KGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDSDYFNIK 327
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 39.1 bits (87), Expect = 0.006
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 15/211 (7%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFN------THACNLEGQEVELTVHDGTVRD 242
H G+++C S L TGS D+T KL T N + V+ V D
Sbjct: 51 HNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLA-- 108
Query: 243 VCFIEDTTNKTSLL-VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG 301
V + ++T+ + V A D + + ++ G +++ VSG
Sbjct: 109 VITTDHFVDRTAAIHVKRIAEDPEEQDAESVL--VLHCPDGKKRINRAVWGPLNQTIVSG 166
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
+DK +R WD TG + G +++ A D + G D T L D+R
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH---FLTGSLDKTAKLWDMR 223
Query: 362 GSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
L+ +T V +V SP +++ G
Sbjct: 224 TLTLLKTYTT-VVPVNAVSLSPLLNHVVLGG 253
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLE 227
K H G I LA++P G ++G D V+L F++ N++
Sbjct: 287 KGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDSDYFNIK 327
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 39.1 bits (87), Expect = 0.006
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVR 241
L+ R H+G + + + + L +G +D +K+ + TH C L H +R
Sbjct: 43 LIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLF-----TLLGHLDYIR 97
Query: 242 DVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVL-SLYNWGGAMFVS 300
V F ++ +VS + D I + + L+GH+ +V+ + ++ + VS
Sbjct: 98 TVQF----HHENPWIVS-ASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVAS---LAVDPSGRLLVCGHDDG 353
S D+TVR WD+ G + PA + S + S VD + ++ GHD G
Sbjct: 153 ASLDQTVRVWDI--GALKKKSASPADDLMRFSQMNSDLFGGVDAIVKYVLEGHDRG 206
Score = 38.3 bits (85), Expect = 0.010
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Query: 307 VRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRAL 366
++ WD R G ++ G P +G + S L V G DD + + + R L
Sbjct: 33 IQLWDYRMGTLIDRFDEHEG-PVRG-----VHFHNSQPLFVSGGDDYKIKVWNYKTHRCL 86
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISAR 426
H +R+V+F ++++A D + + + Q TC SV + H V+ A
Sbjct: 87 FTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSR-TCI--SV-LTGHNHYVMCAS 142
Query: 427 WHPDDFSFLSTSADKTAVLWTI 448
+HP + +S S D+T +W I
Sbjct: 143 FHPKEDLVVSASLDQTVRVWDI 164
Score = 33.9 bits (74), Expect = 0.22
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVK-----------------LMAFNTHACNLEG--Q 229
H + C ++ P DL+ + S D+TV+ LM F+ +L G
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLFGGVD 193
Query: 230 EVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQA--LSGHSGHV 287
+ V +G R V + + + T L+ GA D ++ + K ++ L GH +V
Sbjct: 194 AIVKYVLEGHDRGVNWA--SFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNV 251
Query: 288 LS-LYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLL 346
S +++ + VS S+DK++R WD + + LAV P LL
Sbjct: 252 SSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFR------REHDRFWILAVHPEINLL 305
Query: 347 VCGHDDG 353
GHD+G
Sbjct: 306 AAGHDNG 312
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 275 KTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGC 317
K +L GH ++ + GG + SGS DKT++ WDL T C
Sbjct: 302 KYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQC 344
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 188 HHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
HH G + C G++L +GS DKT+K+ NT C + ++ TV D C I
Sbjct: 310 HHSGEVTCFV--VGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLIS 367
Query: 248 DTTNKT 253
+ + T
Sbjct: 368 SSLDGT 373
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 38.7 bits (86), Expect = 0.008
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 288 LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLV 347
L+L +WG + ++ + TV WD +G +++ + V S+ G L
Sbjct: 95 LNLLDWGSSNVLAIALGDTVYLWDASSGSTYKLVT----IDEEEGPVTSINWTQDGLDLA 150
Query: 348 CGHDDGTCALHDVRGSRALQRFT-PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDL 406
G D+ L D +R ++ H S V S+ ++ + L T G DG++V D++ +
Sbjct: 151 IGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVR--I 206
Query: 407 TCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
+ + H ++V +W S D +W
Sbjct: 207 RSSIVETYLG-HTEEVCGLKWSESGKKLASGGNDNVVHIW 245
Score = 35.9 bits (79), Expect = 0.055
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 14/141 (9%)
Query: 260 GAGDCKIYVTDCIIGKTFQAL-SGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCV 318
G + ++ + DC+ + + L GH V SL W + +G D + D+R
Sbjct: 152 GLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL-AWNNHILTTGGMDGKIVNNDVRIRS-- 208
Query: 319 NIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRA-------LQRFTP 371
+I+ G + V L SG+ L G +D + D R + L RF
Sbjct: 209 SIVETYLGHTEE---VCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEE 265
Query: 372 HSSDVRSVRFSPGAYYLLTAG 392
H++ VR++ + P LL G
Sbjct: 266 HTAAVRALAWCPFQASLLATG 286
Score = 29.9 bits (64), Expect = 3.6
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGH--DDGTCALH 358
G D ++FW+ TG C+N + GS V SL S R L+ H L
Sbjct: 288 GVGDGKIKFWNTHTGACLNSV-------ETGSQVCSLLWSKSERELLSSHGFTQNQLTLW 340
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
+ H+S V + SP + +A D + L ++ G+
Sbjct: 341 KYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQE--VELTVHDGTVRDVCFI 246
H + L WS +G LA+G ND V + + A + ++ H VR + +
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 247 EDTTNKTSLLVSGGAGDCKI 266
+ L GG GD KI
Sbjct: 277 --PFQASLLATGGGVGDGKI 294
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 38.7 bits (86), Expect = 0.008
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 196 LAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSL 255
L +S D L S DK+V+L ++ + + G+ H G V D CF +D++ +
Sbjct: 22 LRFSNNSDHLLVSSWDKSVRL--YDANGDLMRGE----FKHGGAVLDCCFHDDSSGFSV- 74
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLR 313
D K+ D GK L H V + Y++ ++GS DKT++ WD R
Sbjct: 75 -----CADTKVRRIDFNAGKE-DVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPR 127
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 371 PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPD 430
P S + ++RFS + +LL + +D V L D GDL +H V+ +H D
Sbjct: 14 PPSDGISNLRFSNNSDHLLVSSWDKSVRLYDANGDL-----MRGEFKHGGAVLDCCFH-D 67
Query: 431 DFSFLSTSAD 440
D S S AD
Sbjct: 68 DSSGFSVCAD 77
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 38.3 bits (85), Expect = 0.010
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 22/220 (10%)
Query: 192 SIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTN 251
S+ +AWSP G+ + ++L AF+ N Q E+ H G V D+ F N
Sbjct: 409 SVTRVAWSPDGNFIGVAFTKHLIQLYAFS--GPNDLRQHTEIDAHVGAVNDLAFA--NPN 464
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL---YNWGGAMFVSGSQDKTVR 308
+ +++ GD K+ + G+ GH V S+ Y S + D ++
Sbjct: 465 RQLCVIT--CGDDKLIKVWDVSGRKHFTFEGHDAPVYSICPHYKENIQFIFSTAIDGKIK 522
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCG-HDDGTCAL---HDVRGS- 363
W G + + A P K + D + RL CG DG L ++ GS
Sbjct: 523 AWLYDNLG--SRVDYDA--PGKWCTRMLYSADGT-RLFSCGTSKDGDSFLVEWNESEGSI 577
Query: 364 -RALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADL 402
R + F + V V+F + L G DG++ D+
Sbjct: 578 KRTYKEFQKKLAGV--VQFDTSKNHFLAVGEDGQIKFWDM 615
Score = 29.5 bits (63), Expect = 4.8
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLL-VCGHDDGTCA 356
F++ +D ++FWD+ + G P A+ L + G LL V D+G
Sbjct: 601 FLAVGEDGQIKFWDMNNINVLTSTDAEGGLP----ALPHLRFNKDGNLLAVTTADNGFKI 656
Query: 357 LHDVRGSRALQRF-TPHSSDVRS-VRFS--PGA 385
L + G R+L+ TP S +R+ V F PGA
Sbjct: 657 LANPAGFRSLRAMETPASETMRTPVDFKAVPGA 689
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 38.3 bits (85), Expect = 0.010
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 192 SIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTN 251
S+ +AWSP G+LL + + A+ +L Q +E+ H G V D+ F N
Sbjct: 411 SVTRVAWSPDGNLLGVSFTKHLIHVYAY--QGSDLR-QHLEIDAHVGCVNDLAFAH--PN 465
Query: 252 KTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL 290
K +V+ GD K+ + GK GH V S+
Sbjct: 466 KQMCVVT--CGDDKLIKVWDLSGKKLFTFEGHEAPVYSI 502
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLL-VCGHDDGTCA 356
F++ +D ++FW++ + ++ G P+ + L + G LL V D+G
Sbjct: 602 FLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPN----LPRLRFNKDGNLLAVTTADNGFKI 657
Query: 357 LHDVRGSRALQRFTPHS 373
L + G R L+ F S
Sbjct: 658 LANTDGLRTLRAFEARS 674
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 38.3 bits (85), Expect = 0.010
Identities = 48/202 (23%), Positives = 77/202 (38%), Gaps = 15/202 (7%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFN------THACNLEGQEVELTVHDGTVRD 242
H G+++C S L TGS D+T KL T N + V+ V D
Sbjct: 51 HNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLA-- 108
Query: 243 VCFIEDTTNKTSLL-VSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSG 301
V + ++T+ + V A D + + ++ G +++ VSG
Sbjct: 109 VITTDHFVDRTAAIHVKRIAEDPEEQDAESVL--VLHCPDGKKRINRAVWGPLNQTIVSG 166
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
+DK +R WD TG + G +++ A D + G D T L D+R
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH---FLTGSLDKTAKLWDMR 223
Query: 362 GSRALQRFTPHSSDVRSVRFSP 383
L+ +T V +V SP
Sbjct: 224 TLTLLKTYTT-VVPVNAVSLSP 244
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 38.3 bits (85), Expect = 0.010
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 298 FVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL 357
FV+G++ VR +D+ T P + +A+ S+A DP G + G+ A
Sbjct: 231 FVTGTKSHQVRLYDISTQR-----RPVLSFDFRETAITSIAEDPDGHTIYVGNASADLAS 285
Query: 358 HDVRGSRALQRFTPH-SSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
D+R + L F S +RSV P + + G D + + D++
Sbjct: 286 FDIRTGKLLGSFLGKCSGSIRSVVRHPQHQVIASCGLDRYLRVYDVK 332
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 37.9 bits (84), Expect = 0.014
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 262 GDCKIYVTDCIIGKTFQALSGH--SGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVN 319
GD + + DC G + L+GH + V+ + + SGS D VR W+ T C+
Sbjct: 126 GDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSECIR 185
Query: 320 IISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALH-DVRGSRALQRFTPHS-SDVR 377
S +P +AS+A G LL H + RG + + +R
Sbjct: 186 --SHLFYRP-----IASIAFHAEGELLAVASGHKLHMWHYNRRGEGSSPTVVLKTRRSLR 238
Query: 378 SVRFSP-GAYYLLTA 391
+V F P GA LLTA
Sbjct: 239 AVHFHPHGAPLLLTA 253
Score = 32.7 bits (71), Expect = 0.51
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 324 PAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSP 383
P G P + + A+ + D GR L H D T + D L+ T H VRF P
Sbjct: 101 PLGAPPRSTIAAAFSTD--GRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHP 158
Query: 384 GAYYLLTAG 392
++ +G
Sbjct: 159 HHSEIVASG 167
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 37.9 bits (84), Expect = 0.014
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 288 LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLV 347
L+L +WG A ++ + TV WD +G +++ KG V S+ G L
Sbjct: 126 LNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTI---DEDKG-PVTSINWTQDGLDLA 181
Query: 348 CGHDDGTCALHDVRGSRALQRFT-PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQ 403
G D+ L D +R ++ H S V S+ ++ + L T G DG++V D++
Sbjct: 182 VGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVR 236
Score = 29.5 bits (63), Expect = 4.8
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 9/107 (8%)
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGH--DDGTCALH 358
G D ++FW+ TG C+N + GS V SL R L+ H L
Sbjct: 319 GVGDGKIKFWNTHTGACLNSV-------ETGSQVCSLLWSQRERELLSSHGFTQNQLTLW 371
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
+ H+S V + SP + +A D + L ++ G+
Sbjct: 372 KYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 37.9 bits (84), Expect = 0.014
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 181 VLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTV 240
VL+ + H+ ++ +A S + S+D TVK+ ++ + LT H
Sbjct: 1072 VLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRS-RLTYHLEGS 1130
Query: 241 RDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCI---IGKTFQALSG---------HSGHVL 288
R +C N T ++V G ++ D I +G + SG G ++
Sbjct: 1131 RGMCTTM-LRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALV 1189
Query: 289 SLYNW-----GGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSG 343
SL N+ G M + +Q+ + WD R+ + P +G V+SL P G
Sbjct: 1190 SLLNYTADSLSGPMVMYSTQNCGIHLWDTRSDLDAWTLK---ANPEEGY-VSSLVTSPCG 1245
Query: 344 RLLVCGHDDGTCALHDVR 361
V G G L D+R
Sbjct: 1246 NWFVSGSSRGVLTLWDLR 1263
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 37.9 bits (84), Expect = 0.014
Identities = 51/183 (27%), Positives = 73/183 (39%), Gaps = 22/183 (12%)
Query: 237 DGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKT-----FQALSGHSGHVLSL- 290
D + +C I + + LLV+ G +I+ GK F ++ GH L
Sbjct: 1072 DKGISKLCLINELDDSL-LLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPGARDLN 1130
Query: 291 --YNW---GGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRL 345
+W G ++ SG + TV WDL V S P+ S+ A A G
Sbjct: 1131 AVVDWQQQSGYLYASG-ETSTVTLWDLEKEQLVR--SVPS--ESECGVTALSASQVHGGQ 1185
Query: 346 LVCGHDDGTCALHDVRGSRALQRFT-PHSSDVRSV--RFSPG--AYYLLTAGYDGRVVLA 400
L G DG+ L+DVR L T PH R V F PG +++A G +
Sbjct: 1186 LAAGFADGSLRLYDVRSPEPLVCATRPHQKVERVVGLSFQPGLDPAKVVSASQAGDIQFL 1245
Query: 401 DLQ 403
DL+
Sbjct: 1246 DLR 1248
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 37.5 bits (83), Expect = 0.018
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 186 TKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVE-----LTVHDGTV 240
T H +I +A S GD+ TGS+D+ +K+ N + N++ + L+ H+ +
Sbjct: 204 TNAHDDAINAVALSENGDIY-TGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGI 262
Query: 241 RDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQA---LSGHSGHVLSLYNWGGAM 297
+ TN SLL SGG+ D I V + G L GH+ VL L +
Sbjct: 263 NALAL--SGTNG-SLLHSGGS-DGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDIL 318
Query: 298 FVSGSQDKTVRFW 310
SGS DKTVR W
Sbjct: 319 -CSGSADKTVRLW 330
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 37.5 bits (83), Expect = 0.018
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGD-LLATGSNDKTVKLMAFNTHACNLEGQEVEL 233
A T + K K H ++C+ W+P D L+ TGS D TV+L F+ G +
Sbjct: 322 ARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRL--FDRRKLTANGVGSPI 379
Query: 234 TVHDGTVRDVCFIEDTTNKTSLLVSGGA-GDCKIYVTDCIIGKTFQALSGHSG 285
+G V ++ + +K+S+ S G I+ D + K+ +A +G
Sbjct: 380 YKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAG 432
Score = 31.9 bits (69), Expect = 0.90
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCA-LHDVR-GSRALQRFTP-HSSDVRSVRFSP-GAYYLL 389
V +A P+ C D +C L D R G+ + + H +D+ V ++P +L
Sbjct: 295 VEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLIL 354
Query: 390 TAGYDGRVVLADLQGDLTCPLPSVPVAR---HPDKVISARWHPDDFSFLSTSAD 440
T D V L D + LT P+ + H V+ +W PD S +SA+
Sbjct: 355 TGSADNTVRLFDRR-KLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAE 407
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 37.5 bits (83), Expect = 0.018
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 341 PSGRLLVC-GHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVL 399
PSG L V ++D T L D L RF H S V ++ SP + G +L
Sbjct: 245 PSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNISTSPDGKLVAVLGDSPECLL 303
Query: 400 ADL-QGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
AD G + L H D S+ WHP+ + + D T LW +
Sbjct: 304 ADTGSGKVIHGLEG-----HLDYSFSSAWHPNGQILATGNQDTTCRLWDV 348
Score = 37.1 bits (82), Expect = 0.024
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 336 SLAVDPSGRLLVCGHDDGTCALHDVRG-SRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
S A P+G++L G+ D TC L DVR S++L+ + +R++RF+ +L A
Sbjct: 324 SSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMA 380
Score = 35.9 bits (79), Expect = 0.055
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 18/187 (9%)
Query: 199 SPAGDL-LATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLV 257
+P+G L + T +ND TV+L A L +V++ I + + + V
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATNFAL-LNRFAFHWSVNN--------ISTSPDGKLVAV 294
Query: 258 SGGAGDCKIYVTDCIIGKTFQALSGHSGHVLS-LYNWGGAMFVSGSQDKTVRFWDLRTGG 316
G + +C + D GK L GH + S ++ G + +G+QD T R WD+R
Sbjct: 295 LGDSPECLL--ADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVR--- 349
Query: 317 CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDV 376
N+ A+ +L GR L L D + + ++
Sbjct: 350 --NLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAGYSQCQEIDLFGEI 407
Query: 377 RSVRFSP 383
+ FSP
Sbjct: 408 AGISFSP 414
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
A T ++ + H + AW P G +LATG+ D T +L
Sbjct: 304 ADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRL 345
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 37.5 bits (83), Expect = 0.018
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHA 223
L+ + + HK I+ +W+P G AT S DKTVK+ + A
Sbjct: 688 LMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDA 729
Score = 37.1 bits (82), Expect = 0.024
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 331 GSAVASLAVDPSGRLLV--CGHDDGTCA---LHDVRGSRALQRFTPHSSDVRSVRFSPGA 385
G+ + SL D G L+ C + A L +V +A+ R HS V + FS
Sbjct: 600 GNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDD 659
Query: 386 YYLLTAGYDGRVVLADLQ----GDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADK 441
LL+ D + +Q G+++ L + V H + + W+P F ++S DK
Sbjct: 660 TLLLSVSRDRHFSVFSIQRTDNGEVSHKLMA-KVEAHKRIIWACSWNPFGHQFATSSRDK 718
Query: 442 TAVLWTI 448
T +W++
Sbjct: 719 TVKIWSV 725
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 291 YNWGGAMFVSGSQDKTVRFWDLRTGGCVN--IISPPAGQPSKGSAVASLAVDPSGRLLVC 348
+N G F + S+DKTV+ W + + ++ PP G A L + +
Sbjct: 704 WNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVTAVAWTGLDRNEKSGCVAV 763
Query: 349 GHDDGTCALHDVR 361
G + G L +V+
Sbjct: 764 GMESGLIELSNVK 776
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 37.1 bits (82), Expect = 0.024
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+G + + ++ GD+L +GS+D+ + L + + + L + H V FI
Sbjct: 54 HEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYP----SGHCENVFQTKFIPF 109
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKT-FQALSGHSGHVLSLYNWGG--AMFVSGSQDK 305
T ++T ++ SG G ++ GK + L H G V L G +F S +D
Sbjct: 110 TDDRT-IITSGADGQVRLGQI-LENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGEDG 167
Query: 306 TVRFWDLRTGGCVNII-SPPAGQ------PSKGSAVASLAVDP-SGRLLVCGHDDGTCAL 357
V+ +D+R+ ++ S P Q S + S+A+DP + L G D +
Sbjct: 168 FVQHFDIRSNSATMVLYSSPFTQGCRRHHSSSRIRLNSIAIDPRNSYYLAVGGSDEYARV 227
Query: 358 HDVR 361
+D R
Sbjct: 228 YDTR 231
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 37.1 bits (82), Expect = 0.024
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 261 AGDCK--IYVTDCIIGKTFQALSGHSGHVLSLYN--WGGA---MFVSGSQDKTVRFWDLR 313
+GDCK I++ + G +GH S+ + W A +F S S D +V WD+R
Sbjct: 241 SGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIR 300
Query: 314 TGGCVNIISPPAGQPSKGSAVASLAVDP-SGRLLVCGHDDGTCALHDVR----GSRALQR 368
G SP + + V ++ + + +L G DDGT ++ D+R G +
Sbjct: 301 LGK-----SPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAH 355
Query: 369 FTPHSSDVRSVRFSP-GAYYLLTAGYDGRVVLADL 402
F H + S+ +S A L D ++ + DL
Sbjct: 356 FEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDL 390
Score = 32.3 bits (70), Expect = 0.68
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 14/157 (8%)
Query: 163 LQESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSP--AGDLLATGSNDKTVKLMAFN 220
L ES +D ++P L HK Y + WSP AG LL S D + +
Sbjct: 196 LAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLL---SGDCKSMIHLWE 252
Query: 221 THACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQAL 280
+ + + H +V D+ + N + + + D + V D +GK+ AL
Sbjct: 253 PASGSWAVDPIPFAGHTASVEDLQWSPAEEN----VFASCSVDGSVAVWDIRLGKS-PAL 307
Query: 281 S--GHSG--HVLSLYNWGGAMFVSGSQDKTVRFWDLR 313
S H+ +V+S M SGS D T DLR
Sbjct: 308 SFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLR 344
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 37.1 bits (82), Expect = 0.024
Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 17/210 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
HK + A+S L TG +K +++ N + E+ G++R V ++
Sbjct: 96 HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRP----DAPPKEVGNSPGSIRTVEWLH- 150
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVR 308
++ T L GD +++ D K L S + + G +++ + +V+
Sbjct: 151 -SDNTILSSCTDTGDIRLW--DIRSDKIVHTLETKSPVTSAEVSQDGR-YITTADGSSVK 206
Query: 309 FWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPS-GRLLVCGHDDGTCALHDVRGSRALQ 367
FWD + G + P V S +++P G + G +D D + +
Sbjct: 207 FWDAKNFGLLKSYDMPCN-------VESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIG 259
Query: 368 RFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
H V VR++PG + DG V
Sbjct: 260 CNKGHHGPVHCVRYAPGGESYTSGSEDGTV 289
Score = 33.5 bits (73), Expect = 0.29
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 260 GAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFW 310
G D ++ D G+ GH G V + Y GG + SGS+D TVR W
Sbjct: 241 GGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
Score = 33.1 bits (72), Expect = 0.39
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
K H G ++C+ ++P G+ +GS D TV++
Sbjct: 262 KGHHGPVHCVRYAPGGESYTSGSEDGTVRI 291
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 36.7 bits (81), Expect = 0.032
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 185 RTKHHKGSIYCLAWSP--AGDLLATGSNDKTVKLMAFNTHACN--LEGQEVELTVHDGTV 240
+ + H Y L+WS G LL+ GS+D + L N N L+ Q++ H+G V
Sbjct: 173 KLRGHSSEGYGLSWSKFKQGHLLS-GSDDAQICLWDINATPKNKSLDAQQI-FKAHEGVV 230
Query: 241 RDVCFIEDTTNKTSLLVSGGAGDCK-IYVTDC---IIGKTFQALSGHSGHV--LSLYNWG 294
DV + + + G GD + + + D K Q++ HS V L+ +
Sbjct: 231 EDVAW-----HLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFN 285
Query: 295 GAMFVSGSQDKTVRFWDLR 313
+ +GS DKTV+ +DLR
Sbjct: 286 EWVVATGSTDKTVKLFDLR 304
Score = 34.7 bits (76), Expect = 0.13
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 11/177 (6%)
Query: 280 LSGHS--GHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASL 337
L GHS G+ LS + +SGS D + WD+ + + V +
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV 233
Query: 338 AVDPSGRLLVCG-HDDGTCALHDVRG---SRALQRFTPHSSDVRSVRFSP-GAYYLLTAG 392
A L DD + D+R S+ +Q HS +V + F+P + + T
Sbjct: 234 AWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGS 293
Query: 393 YDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFL-STSADKTAVLWTI 448
D V L DL+ L+ L + H ++V W+P + + L S + ++W +
Sbjct: 294 TDKTVKLFDLR-KLSTALHTFD--SHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 36.7 bits (81), Expect = 0.032
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 205 LATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDC 264
LA+GS+D +VKL N C G T+ + + +VC ++ + + LL G + D
Sbjct: 812 LASGSDDCSVKLWNINERNCL--G-----TIRN--IANVCCVQFSPQSSHLLAFGSS-DF 861
Query: 265 KIYVTDCIIGKT-FQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLR 313
+ Y D +T + LSGH+ V V+ S D T++ WDL+
Sbjct: 862 RTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLK 911
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 36.3 bits (80), Expect = 0.042
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 195 CLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTS 254
CL W P+ + G +D + +++F NLE + E HD + F D N
Sbjct: 124 CLDWDPSSTSIVVGLSDGSASVVSFTDS--NLETVQ-EWKGHDFELWTASF--DLNNPN- 177
Query: 255 LLVSGGAGDCKIYVTDC----IIGKTFQALSGHSGHVLSLYNWGGAMF--VSGSQDKTVR 308
LV G+ DCK D + FQ H+ V + + + +GS D+T+R
Sbjct: 178 -LVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 309 FWDLRT 314
WD R+
Sbjct: 237 VWDTRS 242
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 36.3 bits (80), Expect = 0.042
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 253 TSLLVSG-GAGDCKIYVTDCIIGKTFQALSG-HSGHVLSLYNWGGAMFV-SGSQDKTVRF 309
TS+LV G G GD + D G+ +S H G V ++ + A + SG D V
Sbjct: 85 TSVLVLGTGGGD--VLALDVASGQLKWRISDCHPGGVNAVSSSAKASCIYSGGADGMVCQ 142
Query: 310 WDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRF 369
D +G + + V+SL V P G++LV + + +Q+F
Sbjct: 143 IDPHSGNLIRKFK------ASTKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKF 194
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYDGRVV 398
T H VR V F+ Y+L++ R +
Sbjct: 195 TGHPGVVRCVAFTEDGKYVLSSAVGERYI 223
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 36.3 bits (80), Expect = 0.042
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H+G + LAW+ G LL +GS+D + + +++ L + T H + F+ +
Sbjct: 49 HQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKL-LHSID---TGHTANIFCTKFVPE 104
Query: 249 TTNKTSLLVSGGAGDCKI 266
T+++ LV GAGD ++
Sbjct: 105 TSDE---LVVSGAGDAEV 119
Score = 35.9 bits (79), Expect = 0.055
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 13/143 (9%)
Query: 278 QALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWD---------LRTGGCVNIISPPAGQ 327
Q L GH G V +L +N G++ +SGS D + W+ + TG NI
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 328 PSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPG-AY 386
+ V S A D RL G + AL + H+ V+ + PG
Sbjct: 104 ETSDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSAL--YQCHTRRVKKLAVEPGNPN 161
Query: 387 YLLTAGYDGRVVLADLQGDLTCP 409
+ +A DG + D + +CP
Sbjct: 162 VVWSASEDGTLRQHDFRESTSCP 184
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 36.3 bits (80), Expect = 0.042
Identities = 61/271 (22%), Positives = 102/271 (37%), Gaps = 26/271 (9%)
Query: 165 ESINLFRDN--SAPTAPTVLLKRTKHHKGSIYCLAWSPAGD-LLATGSNDKTVKLMAFNT 221
+ I+L+R N S T P + + +++S G + +G + VK+
Sbjct: 65 KKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQR 124
Query: 222 HACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALS 281
C + L H T+ V + + S+ V G + V + G L
Sbjct: 125 KLCIKK-----LKGHTSTITGVMYNCKDEHLASVSVGGD-----LIVHNLASGARATELK 174
Query: 282 GHSGHVLSLYNWGGA---MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSA-VASL 337
+G VL L ++ + + V+ D TV WD TG SP + SA A +
Sbjct: 175 DPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDT-TGR-----SPKMSWLKQHSAPTAGV 228
Query: 338 AVDPSGRLLVCGHD-DGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGR 396
PS ++ D +D GSR + + S+ F Y L+ +GR
Sbjct: 229 CFSPSNEKIIASVGMDKKLYTYD-SGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSNGR 287
Query: 397 VVLADLQGDLTCPLPSVPVARHPDKVISARW 427
VV D++G P+ + + + V S W
Sbjct: 288 VVFYDIRGK-PQPVTVLHAFSNSEDVTSLSW 317
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 36.3 bits (80), Expect = 0.042
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 282 GHSGHVLSLY-NWGGAMFVSGSQDKTVRFWDLRTGGCVNI 320
GH+G V S+ + G SGS D +VR W++ TG C+ +
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKV 460
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHAC 224
K H G++ ++ +G+ +A+GS D +V++ T C
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRC 457
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 36.3 bits (80), Expect = 0.042
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKT-FQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFW 310
+S +++ GA D + V + + + L+GHS V ++ S S DKT+R W
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVW 243
Query: 311 DLRTGGCVNII 321
+L G C+ +I
Sbjct: 244 ELSRGVCIRVI 254
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 35.9 bits (79), Expect = 0.055
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 272 IIGKTFQALSGHSGHVLSLYNWGGAMFV-SGSQDKTVRFWDLRTGGCVNIIS 322
I+ K GH+G VL + +W ++ S S DKTVR W + + C+ + +
Sbjct: 316 IMEKPLYEFRGHTGEVLDI-SWSKDNYLLSASMDKTVRLWKVGSNDCLGVFA 366
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.9 bits (79), Expect = 0.055
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 260 GAGDCKIYVTDCIIGKTFQAL-SGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCV 318
G + ++ V DC+ + + L GH V SL W + +G D + D+R
Sbjct: 170 GLDNSEVQVWDCVSNRHVRTLRGGHESRVGSL-AWNNHILTTGGMDGKIVNNDVRIRS-- 226
Query: 319 NIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHD--VRGSRA----LQRFTPH 372
+II G + V L SG+ L G +D + D + S L RF H
Sbjct: 227 SIIGTYVGHTEE---VCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEH 283
Query: 373 SSDVRSVRFSPGAYYLLTAG 392
++ VR++ + P LL G
Sbjct: 284 TAAVRALAWCPFQASLLATG 303
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEV-ELTVHDGTVRDVCFIE 247
H + L WS +G LA+G ND V + + + N Q + H VR + +
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC- 293
Query: 248 DTTNKTSLLVSGGAGDCKI 266
+ L GG GD KI
Sbjct: 294 -PFQASLLATGGGVGDGKI 311
Score = 29.1 bits (62), Expect = 6.3
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 9/107 (8%)
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGH--DDGTCALH 358
G D + FW+ TG C+N + GS V SL S R L+ H L
Sbjct: 305 GVGDGKINFWNTHTGACLNSV-------ETGSQVCSLLWSKSERELLSAHGFTQNQLTLW 357
Query: 359 DVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
+ H+S V + SP + +A D + L ++ G+
Sbjct: 358 KYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 35.9 bits (79), Expect = 0.055
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 10/123 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H I + W P+GD LA+ S D VK+ T + EG+ V +G C
Sbjct: 817 HANPINSVCWDPSGDFLASVSED-MVKVWTLGTGS---EGECVHELSCNGNKFQSCVFHP 872
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTV 307
SLLV G +++ + KT L H G + SL + + S S DK V
Sbjct: 873 A--YPSLLVIGCYQSLELW--NMSENKT-MTLPAHEGLITSLAVSTATGLVASASHDKLV 927
Query: 308 RFW 310
+ W
Sbjct: 928 KLW 930
Score = 34.3 bits (75), Expect = 0.17
Identities = 42/205 (20%), Positives = 76/205 (37%), Gaps = 22/205 (10%)
Query: 193 IYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNK 252
+ C +S G +LA+ +DK L +T + L H + D+ F +
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRF-----SP 703
Query: 253 TSLLVSGGAGDCKIYVTDCII-GKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDKTVRF 309
+ L ++ + D + V D G + + GHS V SL + + S D +R+
Sbjct: 704 SQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRY 763
Query: 310 WDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRF 369
W + G C + + Q V S L+ + H ++G
Sbjct: 764 WSINNGSCTRVYKGGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQG------- 816
Query: 370 TPHSSDVRSVRFSPGAYYLLTAGYD 394
H++ + SV + P +L + D
Sbjct: 817 --HANPINSVCWDPSGDFLASVSED 839
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 35.9 bits (79), Expect = 0.055
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 295 GAMFVS--GSQDKTVRFWDLRTGGCVNII-------SPPAGQPSKGSAVA-SLAVDPSGR 344
G FV+ G Q V WDL TG + + SP A +G +A L P +
Sbjct: 170 GTTFVAVVGEQPTEVEIWDLNTGDKIIQLPQSSPDESPNASTKGRGMCMAVQLFCPPESQ 229
Query: 345 ---LLVCGHDDGTCALHDVRGSR-ALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLA 400
++ G++DG+ L D+R ++ L HS V S+ + ++ G D ++V+
Sbjct: 230 GFLHVLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMY 289
Query: 401 DL 402
+L
Sbjct: 290 NL 291
Score = 29.1 bits (62), Expect = 6.3
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 333 AVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHS--SDVRSVRFSP--GAYYL 388
+V ++ PS LL G DG + D RA+ HS + V +V SP G +
Sbjct: 19 SVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGEDKI 78
Query: 389 LTAGYDGRVVLADLQ 403
++ G DG V D++
Sbjct: 79 ISQGRDGTVKCWDIE 93
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 35.9 bits (79), Expect = 0.055
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 17/201 (8%)
Query: 190 KGSIYCLAWSP-AGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
+ + CL+W+ + +A+ + V + T +E +E H+ V F
Sbjct: 420 RSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEE-----HEKRAWSVDF--- 471
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVS-GSQDKTV 307
+ + S+LVSG + DCK+ V + + + YN G + +++ GS D +
Sbjct: 472 SRTEPSMLVSG-SDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHI 530
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQ 367
++DLR IS P S S S L D T L DV+ + ++
Sbjct: 531 HYYDLRN------ISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVR 584
Query: 368 RFTPHSSDVRSVRFSPGAYYL 388
F H+++ V + + YL
Sbjct: 585 TFRGHTNEKNFVGLTVNSEYL 605
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 35.9 bits (79), Expect = 0.055
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFI 246
K H ++ +A S G + TGS D+ +++ A T L H V +
Sbjct: 232 KAHDDAVNAIAVSTNGTVY-TGSADRRIRVWAKPTGE-KRHTLVATLEKHKSAVNALALN 289
Query: 247 EDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQA----LSGHSGHVLSLYNWGGAMFVSGS 302
+D S+L SG D I V + + A L GH +LSL+N + +SGS
Sbjct: 290 DDG----SVLFSGSC-DRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSD-LLLSGS 343
Query: 303 QDKTVRFW 310
D+TVR W
Sbjct: 344 ADRTVRIW 351
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 35.5 bits (78), Expect = 0.073
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 294 GGAMFV--SGSQDKTVRFWDLRTGGCVNI-ISPPAGQPSKGSAVASLAVDPSGRLLVC-G 349
GGA V SGS D T++ WD R ++ + PAG SAV + DPSG V G
Sbjct: 31 GGASTVGASGSDDGTMQVWDPRCPPEESVGVVRPAG--ICRSAVCCVEFDPSGGPAVAVG 88
Query: 350 HDDGTCALHDVRG--SRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDG 395
D ++D+R AL H+ V VRF G ++TAG DG
Sbjct: 89 CADRKGYVYDIRKLVDPAL-TLQGHTKTVSYVRFLDGG-TVVTAGTDG 134
Score = 29.9 bits (64), Expect = 3.6
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 190 KGSIYCLAWSPAGD-LLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
+ ++ C+ + P+G +A G D+ K ++ L + L H TV V F++
Sbjct: 69 RSAVCCVEFDPSGGPAVAVGCADR--KGYVYDIR--KLVDPALTLQGHTKTVSYVRFLDG 124
Query: 249 TTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGH--SGHVLSLYNW-GGAMFVSGSQDK 305
T ++ +G G K++ + G+ + GH + + + L W GA+F GS++
Sbjct: 125 GT----VVTAGTDGCLKLWSVED--GRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENN 178
Query: 306 TVRFWDLRTGGCVNIIS-PPAGQPSKGSA--VASLAVDPSG---RLLVCGHDDGTCALH 358
V +D R G V + P G S V+S+ SG LV G DG ++
Sbjct: 179 RVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVY 237
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 35.5 bits (78), Expect = 0.073
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSP-AGDLLATGSNDKTVKLMAFNTHACNLEGQEVEL 233
A T + +K K H ++C+ W+P +L+ TGS D TV++ F+ G +
Sbjct: 311 ARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRV--FDRRNLTSNGVGSPV 368
Query: 234 TVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDC 271
+G V ++ + +K+S+ S A D + + DC
Sbjct: 369 YKFEGHRAAVLCVQWSPDKSSVFGS-SAEDGLLNIWDC 405
Score = 34.7 bits (76), Expect = 0.13
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 13/201 (6%)
Query: 251 NKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFW 310
++ LL+ G D + + C + F LSG + L+N + ++GS K+
Sbjct: 198 SRPDLLLIGHQDDAEFALAMCPT-EPF-VLSGGKDKSVILWNIQDHITMAGSDSKSPGSS 255
Query: 311 DLRTGGCVNIISPPAGQP-----SKGSAVASLAVDPSGRLLVCGHDDGTCA-LHDVRG-- 362
+TG + P+ P V +A PS C D +C L D R
Sbjct: 256 FKQTGEGSDKTGGPSVGPRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGT 315
Query: 363 SRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVAR---HP 419
S A++ H +D+ V ++P L+ G V + +LT PV + H
Sbjct: 316 SPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHR 375
Query: 420 DKVISARWHPDDFSFLSTSAD 440
V+ +W PD S +SA+
Sbjct: 376 AAVLCVQWSPDKSSVFGSSAE 396
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 35.5 bits (78), Expect = 0.073
Identities = 56/266 (21%), Positives = 108/266 (40%), Gaps = 22/266 (8%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEV--ELTVHDGTV---RDV 243
H+G++ L S G++L + D TV+L +N +LE + E + ++
Sbjct: 98 HQGAVRGLTASTDGNVLVSCGTDCTVRL--WNVPRPSLEDSSISSENFIEPSATYVWKNA 155
Query: 244 CFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGA-MFVSG 301
+ D + L + GA ++ + + + Q+ + V+S+ +N G + +
Sbjct: 156 FWAVDHQFEGDLFATAGA---QLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATS 212
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
+ D+++ +DLR I +K +++A ++P L ++DG+C D R
Sbjct: 213 ASDRSITIYDLRLSSAARKII----MMTKTNSIAWNPMEPMN--LTAANEDGSCYSFDGR 266
Query: 362 G-SRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPD 420
A H S V + FSP +T YD V + G + + +
Sbjct: 267 KLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHS---REIYHTKRMQ 323
Query: 421 KVISARWHPDDFSFLSTSADKTAVLW 446
+V ++ D +S S D LW
Sbjct: 324 RVFCVKYSCDATYVISGSDDTNLRLW 349
Score = 29.5 bits (63), Expect = 4.8
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 12/151 (7%)
Query: 300 SGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHD 359
S S D +R WD+ + V P AV L G +LV D T L +
Sbjct: 74 SASMDGDIRLWDISSRRTV------CQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWN 127
Query: 360 V-RGSRALQRFTPHSSDVRSVRFS-PGAYYLLTAGYDGRV-VLADLQGDLTCPLPSVPVA 416
V R S + + S + A++ + ++G + A Q D+ S PV
Sbjct: 128 VPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQLDIWNHNRSQPVQ 187
Query: 417 RHP---DKVISARWHPDDFSFLSTSADKTAV 444
D VIS R++P + + L+TSA ++
Sbjct: 188 SFQWGTDSVISVRFNPGEPNLLATSASDRSI 218
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFN 220
K H ++ + +SP G TGS D++V++ +N
Sbjct: 276 KDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYN 309
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 35.5 bits (78), Expect = 0.073
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ S S DK V+ WD+ TG C + + AVA P +L+ G D T
Sbjct: 248 ILASASADKKVKVWDVATGTCKITME---HHTKEVQAVAWNHYAP--EVLLSGSFDQTVV 302
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGY-DGRVVLADL-QGDLTC--PLPS 412
L D R SDV S+ + P + + DG V D+ Q ++ PS
Sbjct: 303 LKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPS 362
Query: 413 VPVARHPDKVISARWHPDDFSFLST-SADKTAVLWTI 448
+ H + S ++ + L+T S D+T LW +
Sbjct: 363 FTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDL 399
Score = 30.7 bits (66), Expect = 2.1
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 201 AGDLLATGSNDKTVKL--MAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVS 258
A +LLATGS D+TVKL ++ N +C + H+ + FI + + LL
Sbjct: 381 APNLLATGSKDRTVKLWDLSNNEPSC--------IATHNPNAGGLFFIAFSPDNPFLLAM 432
Query: 259 GGA-GDCKIYVT 269
GG G+ K++ T
Sbjct: 433 GGVMGELKLWDT 444
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 52 GKLYAVGSN-TKTLRICSYPKIEDV-NLLETLGENENGNQVELYKPEEKTERVLGLIWKT 109
G AVGS+ T T+ I D+ ++ G+N+ GN YK T VLGL W
Sbjct: 188 GNFLAVGSDGTPTIEIWDLDAWFDMLPCVQLGGQNKEGN----YKQGSHTRSVLGLAWNK 243
Query: 110 E 110
E
Sbjct: 244 E 244
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 35.5 bits (78), Expect = 0.073
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 253 TSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGA----MFVSGSQDKTV 307
T++ VS K+Y + G+ + GHS V + ++ A + S S D T+
Sbjct: 54 TAIAVSLSTNTVKLYSP--VTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTI 111
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQ 367
R WD R+ V+ I Q + S + + L+ G L D R S+ +
Sbjct: 112 RSWDTRSFQQVSRIDTGNDQ-----EIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVA 166
Query: 368 RF-TPHSSDVRSVRFSPG-AYYLLTAGYDGRVVLADLQGDL 406
H DV V F P LL+A DG + L + +GD+
Sbjct: 167 CLEESHMDDVTQVHFVPNKPNKLLSASVDGLICLFNTEGDI 207
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 35.5 bits (78), Expect = 0.073
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 324 PAGQPSKGSAVAS---LAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVR 380
P Q S + S +A+ G ++ GH D + L G++ L+ H + V +
Sbjct: 2616 PQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLA 2675
Query: 381 FSPGAYYLLTAGYDGRVVL 399
SP +L+T D V+L
Sbjct: 2676 LSPDNNFLVTGSRDSTVLL 2694
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 166 SINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
SI L + A T T H + CLA SP + L TGS D TV L
Sbjct: 2649 SIKLVSSDGAKTLETAF-----GHCAPVTCLALSPDNNFLVTGSRDSTVLL 2694
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 35.5 bits (78), Expect = 0.073
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 1/150 (0%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG 315
L+ G+ D + V K +++ H V ++ + + +GS D T++ W
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVFTGSADGTLKVWKREVQ 318
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSD 375
G + +AV +LAV+ + ++ CG DGT + R + T H
Sbjct: 319 GKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE-RQKYLTHKGTIHGHR 377
Query: 376 VRSVRFSPGAYYLLTAGYDGRVVLADLQGD 405
+ + + LL+ G D + + GD
Sbjct: 378 MAVLCLATAGSLLLSGGADKNICVWKRNGD 407
Score = 34.3 bits (75), Expect = 0.17
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 18/130 (13%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H ++ CL+ + LL +GS DKT+K+ + C LE E HD V V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKC-LESIE----AHDDAVNTV----- 293
Query: 249 TTNKTSLLVSGGA-GDCKIYVTDCIIGKTF-----QALSGHSGHVLSL-YNWGGAMFVSG 301
+ L+ +G A G K++ + + GK Q L V +L N A+ G
Sbjct: 294 VSGFDDLVFTGSADGTLKVWKRE-VQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCG 352
Query: 302 SQDKTVRFWD 311
S D TV FW+
Sbjct: 353 SSDGTVNFWE 362
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 35.1 bits (77), Expect = 0.097
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 269 TDCIIGKTFQALSGHSGHVLSLYN---WGGA-------MFVSGSQDKTVRFWDLRTGGCV 318
TD ++ K Q L GH+G VL L +G A + +SGS D T+R WDL +G +
Sbjct: 515 TDPLVYK--QRLLGHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVI 572
Query: 319 NIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPH 372
I+ + + P + + DD AL + R + F H
Sbjct: 573 MIMHHHVAPVRQIILSPAPTKRPWSKCFLSVGDDSCVALSSLETLRVERMFPGH 626
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 35.1 bits (77), Expect = 0.097
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 278 QALSGHSGHV--LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q + H G V LS+ W VS S D T++ W R + ++ P G P +
Sbjct: 315 QIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFV 374
Query: 336 SLAVDPSGRLLVCG 349
+ P +L+ G
Sbjct: 375 TSPERPDHIILITG 388
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 35.1 bits (77), Expect = 0.097
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 278 QALSGHSGHV--LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q + H G V LS+ W VS S D T++ W R + ++ P G P +
Sbjct: 350 QIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFV 409
Query: 336 SLAVDPSGRLLVCG 349
+ P +L+ G
Sbjct: 410 TSPERPDHIILITG 423
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 35.1 bits (77), Expect = 0.097
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 337 LAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGR 396
+ V+P ++ GH GT + L + H V SV F P + + T+G + +
Sbjct: 245 MEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERK 304
Query: 397 VVLADLQ 403
+ + DL+
Sbjct: 305 IKIWDLR 311
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 43 VRCAEFHPNGKLYAVGSNTKTLRICSYPKIEDVNLLET 80
V FHPNG L A + ++I K E+V + +
Sbjct: 284 VSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHS 321
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 34.7 bits (76), Expect = 0.13
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 185 RTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVC 244
R H+GSI+ + WS G + + S+D++ ++ ++ E L H V D C
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQ----EVVGPVLFGHSVRVWDCC 285
Query: 245 FIEDTTNKTSLLVSGGAG-DCKIYVTDCIIGKTFQALSGHSGHVL--SLYNWGGAMFVSG 301
I D SL+V+ G C+++ D G + + H G + LY+ ++ V+
Sbjct: 286 -ISD-----SLIVTAGEDCTCRVWGVD---GTQLEVIKEHIGRGIWRCLYDPNSSLLVTA 336
Query: 302 SQDKTVRFWDLRTGG 316
D ++ L G
Sbjct: 337 GFDSAIKVHQLHNRG 351
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 34.7 bits (76), Expect = 0.13
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 185 RTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVC 244
R H+GSI+ + WS G + + S+D++ ++ ++ E L H V D C
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQ----EVVGPVLFGHSVRVWDCC 285
Query: 245 FIEDTTNKTSLLVSGGAG-DCKIYVTDCIIGKTFQALSGHSGHVL--SLYNWGGAMFVSG 301
I D SL+V+ G C+++ D G + + H G + LY+ ++ V+
Sbjct: 286 -ISD-----SLIVTAGEDCTCRVWGVD---GTQLEVIKEHIGRGIWRCLYDPNSSLLVTA 336
Query: 302 SQDKTVRFWDLRTGG 316
D ++ L G
Sbjct: 337 GFDSAIKVHQLHNRG 351
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 34.7 bits (76), Expect = 0.13
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 186 TKHHKGSIYCLAWSPAGDL-LATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVC 244
T+H K + + + +SP+ +GS+D +VKL + N E + + T+ +VC
Sbjct: 805 TEHQKRA-WSVDFSPSDPTKFVSGSDDCSVKLWSIN------EKRSLG-TIWSPA--NVC 854
Query: 245 FIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKT-FQALSGHSGHVLSLYNWGGAMFVSGSQ 303
++ ++ LL G A D K+Y D KT + L+GH V + VS S
Sbjct: 855 CVQFSSYSNHLLAFGSA-DYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSAST 913
Query: 304 DKTVRFWDL 312
D +++ W+L
Sbjct: 914 DNSLKLWNL 922
Score = 30.3 bits (65), Expect = 2.7
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 5/140 (3%)
Query: 189 HKGSIYC-LAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIE 247
+ S+ C L++ P + +A K +K+ FN G L + C
Sbjct: 714 NSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCW 773
Query: 248 DTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL--YNWGGAMFVSGSQDK 305
++ K L + G +I+ D G+ F + H S+ FVSGS D
Sbjct: 774 NSYIKNYLASTDYDGVVQIW--DAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDC 831
Query: 306 TVRFWDLRTGGCVNIISPPA 325
+V+ W + + I PA
Sbjct: 832 SVKLWSINEKRSLGTIWSPA 851
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 34.3 bits (75), Expect = 0.17
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 279 ALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
+L+GH+ V++LY ++ SGS DKT++ W L C+ ++
Sbjct: 269 SLTGHTLAVVTLYVGANRLY-SGSMDKTIKVWSLDNLQCIQTLT 311
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 294 GGAMFVSGSQDKTVRFWDLRTGGCVNII 321
G +GS+D+T+R WD +G C ++
Sbjct: 162 GSDKLYTGSKDETLRVWDCASGQCTGVL 189
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 261 AGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLR 313
+G C+++ D + H G+V L + VS S DKT+R WDLR
Sbjct: 433 SGQCRLF--DLRENGFISSWRAHDGYVTKLVAPESHLLVSSSLDKTLRIWDLR 483
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 171 RDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
++ S +P +LL +G IY LA S GDLL TGS+ K +++
Sbjct: 79 KEKSTNHSPNILLGSLVREEGHIYSLATS--GDLLYTGSDSKNIRV 122
Score = 32.3 bits (70), Expect = 0.68
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 204 LLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGD 263
L+ TGS D TVK+ A + + E + +D ++++ LV G+ D
Sbjct: 266 LVFTGSADGTVKVWRREDQAKDTKHFFSETLLK----QDCAVTAIAVDQSATLVYCGSSD 321
Query: 264 CKIYVTDCIIG-KTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGG----CV 318
+ + K L GH VL L G MF SGS D +R W GG C+
Sbjct: 322 GTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNLMF-SGSADLGIRVWRRPEGGGEHVCL 380
Query: 319 NIISPPAGQPSKGSAV 334
++++ AG P K AV
Sbjct: 381 SVLTGHAG-PVKCLAV 395
Score = 31.9 bits (69), Expect = 0.90
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 278 QALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASL 337
++++ H V ++ + + +GS D TV+ W + AV ++
Sbjct: 247 ESVNAHEDAVNAVVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAI 306
Query: 338 AVDPSGRLLVCGHDDGT 354
AVD S L+ CG DGT
Sbjct: 307 AVDQSATLVYCGSSDGT 323
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/98 (27%), Positives = 41/98 (41%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG 315
L+ + D I V K +++ H V S+ + A+ SGS D TV+ W
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQ 279
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
G + + SAV +LAV +G + G DG
Sbjct: 280 GKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDG 317
Score = 33.9 bits (74), Expect = 0.22
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 27/198 (13%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H ++ CL+ + LL + S D+T+K+ C LE + HD V V
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKC-LE----SIPAHDDAVNSVV---S 256
Query: 249 TTNKTSLLVSGGA-GDCKIYVTDCIIGK-----TFQALSGHSGHVLSL-YNWGGAMFVSG 301
TT +++ SG A G K + D GK Q L+ V +L + GA G
Sbjct: 257 TTE--AIVFSGSADGTVKAWKRD-QQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFG 313
Query: 302 SQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVR 361
S D V FW+ +N G KG +A L ++ +G L+ G D T +
Sbjct: 314 SSDGLVNFWEREKQ--LNY-----GGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRD 366
Query: 362 GS--RALQRFTPHSSDVR 377
G+ L T H+ V+
Sbjct: 367 GNIHTCLSVLTGHTGPVK 384
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 333 AVASLAVDPS-GRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
A LA P ++ G DD T +++VR + HS + + FS L+++
Sbjct: 867 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 926
Query: 392 GYDGRVVLADLQG--DLTCPLPSVPVARHPDKVISAR--WHPDDFSFLSTSADKTAVLWT 447
G D ++ + + G + +P R + R +H D FL + A+ T
Sbjct: 927 GADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYET 986
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 333 AVASLAVDPS-GRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
A LA P ++ G DD T +++VR + HS + + FS L+++
Sbjct: 867 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 926
Query: 392 GYDGRVVLADLQG--DLTCPLPSVPVARHPDKVISAR--WHPDDFSFLSTSADKTAVLWT 447
G D ++ + + G + +P R + R +H D FL + A+ T
Sbjct: 927 GADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYET 986
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 34.3 bits (75), Expect = 0.17
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 260 GAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVN 319
G+GD I G +SGH V +L G ++ SGS D TVR W L +
Sbjct: 603 GSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLY-SGSWDGTVRLWSLSDNSLLT 661
Query: 320 II 321
++
Sbjct: 662 VL 663
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 34.3 bits (75), Expect = 0.17
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 291 YNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVAS-----LAVDPSGRL 345
Y+ G +FVS DK V+ W + C+N + + + A++S D G +
Sbjct: 71 YSTSGKLFVSAGDDKLVKIWSADSWRCLNTVC--SEKRVSAVAISSDDSHVCYADKFGVV 128
Query: 346 LVC---GHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
V G +DG L +G+ L + S + S+ FSP Y+L+A D ++
Sbjct: 129 WVIELDGINDGK-TLPSKKGALLLSHY---CSIITSLEFSPDGRYILSADRDFKI 179
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 299 VSGSQDKTVRFWDLRTGGCVNI--ISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+SGS D TVR WD+ +G ++ +S AG + V + + A
Sbjct: 223 MSGSGDSTVRLWDITSGSLLDTCEVSTVAGHAESNENESPTQVTVTDICAIPNSSLAAVA 282
Query: 357 LHDVRGSRALQ-RFTPHSSDVRSVRFSPGAYYLLTA 391
+ +G L T H+ + V PG ++ T+
Sbjct: 283 IQSFQGIFLLSCDLTAHTLSITKVIKIPGESFIPTS 318
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 33.9 bits (74), Expect = 0.22
Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 6/154 (3%)
Query: 250 TNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSGHV--LSLYNWGGAMFVSGSQDKTV 307
TN L V IY D + + L G G V + G ++ G +D +
Sbjct: 223 TNSGMLAVGSYGQTTGIYREDNM--ELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYI 280
Query: 308 RFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQ 367
WD+R V I+ + ++P GR L G DG ++D++ +
Sbjct: 281 LCWDIRKS--VEIVYKLYRATENTNQRVFFDIEPCGRHLGTGGQDGLVHMYDLQTGNWVS 338
Query: 368 RFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLAD 401
+ S V + F P T+ R + D
Sbjct: 339 GYQAASDTVNAFSFHPYLPMAATSSGHRRFAIPD 372
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 416 ARHPDKVISA-RWHPDDFSFLSTSADKTAVLWTIP 449
AR+P+ + +W PD FL++S D T L+ +P
Sbjct: 47 ARNPNNFLKGLKWSPDGSCFLASSEDNTLSLFHLP 81
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 33.5 bits (73), Expect = 0.29
Identities = 52/194 (26%), Positives = 79/194 (40%), Gaps = 25/194 (12%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGT-----VRDV 243
H GSI + +S G LA+ D V++ +N E E+ D + + D
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRV--WNIIEDERRDNEFEVAESDSSCVYFGMNDK 313
Query: 244 CFIED--TTNKT-----SLLVSGGAGDCKIYVTDCI-IGKTFQ-ALSGHSGHVLSLYNWG 294
IE T N+ LL C + + I +T Q GH+G +L L +W
Sbjct: 314 SQIEPLKTENEKIEKSRGLLRKKSESTCAVLPSKVFSISETPQHEFRGHTGEILDL-SWS 372
Query: 295 GAMFV-SGSQDKTVRFWDLRTGG-CVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDD 352
F+ S S D+TVR W + + C+ + S S + VA VD + + G D
Sbjct: 373 EKGFLLSSSVDETVRLWRVGSSDECIRVFS----HKSFVTCVAFNPVDDN--YFISGSID 426
Query: 353 GTCALHDVRGSRAL 366
G + DV R +
Sbjct: 427 GKVRIWDVSQFRVV 440
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 33.5 bits (73), Expect = 0.29
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDL 312
L +GG D +++ D + QA GH V L + +G + SGS D+TV+ W++
Sbjct: 237 LATGGV-DRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNV 293
Score = 32.7 bits (71), Expect = 0.51
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 300 SGSQDKTVRFWDLRTGGCVNIISP--------------PAGQPSKGSAVASLAVDPSGRL 345
S S+D T+ WD+ +G I P P + ++A LAV GR
Sbjct: 178 SASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLA-LAVSSDGRY 236
Query: 346 LVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAGYDGRV 397
L G D + DVR +Q F H + V + F G L + +D V
Sbjct: 237 LATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTV 288
>At3g19440.1 68416.m02465 pseudouridine synthase family protein low
similarity to SP|P23851 Ribosomal large subunit
pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate
synthase) (Uracil hydrolyase) {Escherichia coli};
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 477
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 396 RVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW-TIPP 450
R+ A L+ L P++ ++P K +SA H S+ +T D + W T+PP
Sbjct: 5 RLATATLRRQLQSSSPTISTFKNPTKALSAAAHQSTRSYSTTQTDDSRGKWLTLPP 60
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 33.5 bits (73), Expect = 0.29
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 278 QALSGHSGHV--LSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVA 335
Q + H G V LS+ W VS S D TV+ W R + ++ P G P +
Sbjct: 334 QIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFV 393
Query: 336 SLAVDPSGRLLVCG 349
+ P +L+ G
Sbjct: 394 TSPERPDHIILITG 407
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 33.1 bits (72), Expect = 0.39
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 272 IIGKTFQALSGHSGHVLSLYNWG-GAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
++ K GHSG +L + +W +S S D +VR W + C+ I S
Sbjct: 344 VLDKPLHEFLGHSGDILDI-SWSKNNRLLSASVDNSVRLWQIGCEDCLGIFS 394
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVP 414
Q H + +++FSP YL +AG DG + + + D C VP
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVP 292
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 33.1 bits (72), Expect = 0.39
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 272 IIGKTFQALSGHSGHVLSLYNWG-GAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
++ K GHSG +L + +W +S S D +VR W + C+ I S
Sbjct: 344 VLDKPLHEFLGHSGDILDI-SWSKNNRLLSASVDNSVRLWQIGCEDCLGIFS 394
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 367 QRFTPHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVP 414
Q H + +++FSP YL +AG DG + + + D C VP
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVP 292
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 33.1 bits (72), Expect = 0.39
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Query: 301 GSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDV 360
GSQ+ ++ W++ T + GS+V S P+ ++ G DG +H++
Sbjct: 157 GSQEGPLQLWNINTKKMLYQFK------GWGSSVTSCVSSPALDVVAIGCADGKIHVHNI 210
Query: 361 RGSRALQRFTPHSSD-VRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHP 419
+ + F S V ++ FS LL +G G + + L SV H
Sbjct: 211 KLDEEIVTFEHASRGAVTALSFSTDGRPLLASG--GSFGVISIWNLNKKRLQSVIRDAHD 268
Query: 420 DKVISARWHPDDFSFLSTSADKTAVLW 446
+IS + ++ +S SAD + +W
Sbjct: 269 SSIISLNFLANEPVLMSASADNSLKMW 295
Score = 29.1 bits (62), Expect = 6.3
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 256 LVSGGAGDCKIYVTDCIIGK---TFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDL 312
+V+ G D KI+V + + + TF+ S + LS G + SG + W+L
Sbjct: 195 VVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNL 254
Query: 313 RTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCAL--HDVR-GSRALQRF 369
++I + + S++ SL + +L+ D + + D G L RF
Sbjct: 255 NKKRLQSVI-----RDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRF 309
Query: 370 -TPHSSDVRSVRFSPGAYYLLTAGYD 394
+ HS+ +RF ++L+AG D
Sbjct: 310 RSGHSAPPLCIRFYSNGRHILSAGQD 335
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 331 GSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLT 390
G ++ + LL DD L+DV + ++ F H+ + + FS ++++
Sbjct: 515 GCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVIS 574
Query: 391 AGYDGR-----VVLADLQGDLTCPLPSVPVARHPDKVISARWHPD 430
+ DG V+LA + +P ++ P+ + A H D
Sbjct: 575 SSMDGSLRIWDVILAKQIDGVHVDVPITALSLSPNMDVLATAHSD 619
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.1 bits (72), Expect = 0.39
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 333 AVASLAVDPS-GRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
A LA P ++ G DD T +++VR + HS + + FS L+++
Sbjct: 878 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 937
Query: 392 GYDGRVVLADLQG-----DLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
G D ++ + + G PLP P ++H D FL + A+
Sbjct: 938 GADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAPSDT-RVQFHQDQAHFLVVHETQLAIYE 996
Query: 447 T 447
T
Sbjct: 997 T 997
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.1 bits (72), Expect = 0.39
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 333 AVASLAVDPS-GRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA 391
A LA P ++ G DD T +++VR + HS + + FS L+++
Sbjct: 878 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 937
Query: 392 GYDGRVVLADLQG-----DLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKTAVLW 446
G D ++ + + G PLP P ++H D FL + A+
Sbjct: 938 GADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAPSDT-RVQFHQDQAHFLVVHETQLAIYE 996
Query: 447 T 447
T
Sbjct: 997 T 997
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 32.7 bits (71), Expect = 0.51
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIED 248
H ++ CL+ + LL +GS DKT+K+ + C LE + HD + V D
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKC-LE----SIQAHDDAINTVAAGFD 302
Query: 249 TTNKTSLLVSGGA-GDCKIYVTDCIIGK-----TFQALSGHSGHVLSL-YNWGGAMFVSG 301
LL +G A G K++ + + GK L V +L N A+ G
Sbjct: 303 -----DLLFTGSADGTLKVWKRE-LQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCG 356
Query: 302 SQDKTVRFWD 311
S D TV FW+
Sbjct: 357 SSDGTVNFWE 366
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFW--DLR 313
L+ G+ D + V K +++ H + ++ + +GS D T++ W +L+
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLFTGSADGTLKVWKRELQ 322
Query: 314 TGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGT 354
G + + + +AV +LAV+ + ++ CG DGT
Sbjct: 323 GKGTKHFLVNVLMKQE--NAVTALAVNITAAVVYCGSSDGT 361
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 32.7 bits (71), Expect = 0.51
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 182 LLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
LL K HK ++ C + S G+ + +GS DKT+++
Sbjct: 887 LLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRV 921
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 32.7 bits (71), Expect = 0.51
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 135 KREALKVVMSLFDPLGFVS-PVTNRAKQLL--QESINLFRDNSAPTAPTVLLKRTKHHKG 191
+R AL+ + S P FV PV ++ + + + + D + T + LL HK
Sbjct: 124 ERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLG----HKD 179
Query: 192 SIYCLAWSPAGD-LLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTT 250
+ C SP D +L TGS D TVK+ H N E+ H V DV ++
Sbjct: 180 YVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIA-EIN---HGLPVEDVVYLP--- 232
Query: 251 NKTSLLVSGGAGDCKIYVTDCI-IGKTFQALSGHSGHVLSL 290
L+ + G K++ D I GK ++ H+ V SL
Sbjct: 233 -SGGLIATAGGNSVKVW--DLIGGGKMVCSMESHNKTVTSL 270
Score = 31.9 bits (69), Expect = 0.90
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVL--SLYNWGGAMFVSGSQDKTVRFWDLR 313
LVSGG D + D L GH +V +M V+GS D TV+ WD R
Sbjct: 151 LVSGG-DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
Query: 314 TGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHS 373
S + + G V + PSG L+ + + G + + H+
Sbjct: 210 VH-----TSNWIAEINHGLPVEDVVYLPSGGLIATAGGNSVKVWDLIGGGKMVCSMESHN 264
Query: 374 SDVRSVR 380
V S+R
Sbjct: 265 KTVTSLR 271
Score = 31.1 bits (67), Expect = 1.6
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Query: 334 VASLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFS-PGAYYLLTAG 392
V+S+ G L G + D++ AL+ HS+ R V++ +L++ G
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 393 YDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLST-SADKTAVLW 446
DG V D+ G + H D V P + S L T S D T +W
Sbjct: 156 DDGVVKYWDVAGATVIS----DLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 32.7 bits (71), Expect = 0.51
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 25/207 (12%)
Query: 196 LAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSL 255
L +SP + L S D ++L + + +LE + D CF ++T+ TS
Sbjct: 19 LRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNS------QAALLDCCFENESTSFTS- 71
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRT 314
G G + Y D G T + H S+ Y++ +S D+ ++FWD R
Sbjct: 72 ---GSDGFIRRY--DLNAG-TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQ 125
Query: 315 GGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG-SRALQRFTPH- 372
+ + S A G AV + V L+VC D + ++D+R A Q +
Sbjct: 126 RESL-VFSTDA-----GGAVGCVTVS-GNNLVVC--VDASMHIYDLRNLDEAFQSYASQV 176
Query: 373 SSDVRSVRFSPGAYYLLTAGYDGRVVL 399
+R + P + DGRV +
Sbjct: 177 EVPIRCITSVPYSRGYAVGSVDGRVAV 203
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 32.7 bits (71), Expect = 0.51
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 25/207 (12%)
Query: 196 LAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSL 255
L +SP + L S D ++L + + +LE + D CF ++T+ TS
Sbjct: 19 LRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNS------QAALLDCCFENESTSFTS- 71
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGGAMFVSGSQDKTVRFWDLRT 314
G G + Y D G T + H S+ Y++ +S D+ ++FWD R
Sbjct: 72 ---GSDGFIRRY--DLNAG-TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQ 125
Query: 315 GGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRG-SRALQRFTPH- 372
+ + S A G AV + V L+VC D + ++D+R A Q +
Sbjct: 126 RESL-VFSTDA-----GGAVGCVTVS-GNNLVVC--VDASMHIYDLRNLDEAFQSYASQV 176
Query: 373 SSDVRSVRFSPGAYYLLTAGYDGRVVL 399
+R + P + DGRV +
Sbjct: 177 EVPIRCITSVPYSRGYAVGSVDGRVAV 203
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 32.3 bits (70), Expect = 0.68
Identities = 23/98 (23%), Positives = 40/98 (40%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTG 315
L+ + D I V K +++ H + S+ + + +GS D TV+ W
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSADGTVKVWKRELQ 308
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDG 353
G + + +AV +LAV ++ CG DG
Sbjct: 309 GKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDG 346
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 273 IGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGS 332
+ +T+ L S V+ V+G + + V+FWD+ + ++ + G PS
Sbjct: 590 VKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQ-VKFWDMDSVDLLSSTAAEGGLPSS-- 646
Query: 333 AVASLAVDPSGRLL-VCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGA 385
L ++ G LL V D+G L + GSR L D S R PG+
Sbjct: 647 --PCLRINKEGTLLAVSTTDNGIKILANAEGSRILHSMANRGLD--SSRAPPGS 696
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 31.9 bits (69), Expect = 0.90
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 273 IGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGS 332
+ +T+ L S V+ V+G + + V+FWD+ + ++ + G PS
Sbjct: 590 VKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQ-VKFWDMDSVDLLSSTAAEGGLPSS-- 646
Query: 333 AVASLAVDPSGRLL-VCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGA 385
L ++ G LL V D+G L + GSR L D S R PG+
Sbjct: 647 --PCLRINKEGTLLAVSTTDNGIKILANAEGSRILHSMANRGLD--SSRAPPGS 696
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 31.9 bits (69), Expect = 0.90
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 370 TPHSSD-VRSVRFSPGAYYLLTAGYDGRVVLADL---QGDLTCPLPSVPVARHPDKVISA 425
TP ++D + S+ FSP A L+ +D +V ++ G + P V ++ H V+ +
Sbjct: 22 TPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASE-PKVSMS-HDQPVLCS 79
Query: 426 RWHPDDFSFLSTSADKTAVLWTI 448
W D + + DK A +W +
Sbjct: 80 AWKDDGTTVFTGGCDKQAKMWPL 102
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVK 215
H +AW P +LL TGS DKT+K
Sbjct: 114 HDAPFNQIAWIPGMNLLVTGSWDKTLK 140
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 31.5 bits (68), Expect = 1.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 418 HPDKVISARWHPDDFSFLSTSADKTAVLWTI 448
H V+ +W PDD +S S D + ++W +
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDV 82
Score = 30.3 bits (65), Expect = 2.7
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 275 KTFQALSGHSGHVLSLYNWG--GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGS 332
K ++LS H VL L W A +SGS D + WD+ G I+ +
Sbjct: 44 KVHKSLSFHRKDVLDL-QWSPDDAYLISGSVDNSCIIWDVNKGSVHQILD------AHCH 96
Query: 333 AVASLAVDPSGRLLVCGHDDGTCALH 358
V +A DP + + D TC ++
Sbjct: 97 YVQGVAWDPLAKYVASLSSDRTCRIY 122
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSG--RLLVCGHD 351
+ ++ S+D++VR W++ TG C+ I AG V S+ PS R CG D
Sbjct: 143 LVITASKDESVRLWNVETGICILIF---AGAGGHRYEVLSVDFHPSDIYRFASCGMD 196
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 239 TVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKT-FQALSGHSGHVLSLYNWGGAM 297
T +VC ++ ++ L G A D K+Y D K + GHS V + +
Sbjct: 659 TKANVCCVQFPSDSGRSLAFGSA-DHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSST 717
Query: 298 FVSGSQDKTVRFWDL 312
VS S D T++ WDL
Sbjct: 718 LVSSSTDNTLKLWDL 732
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 336 SLAVDPSGRLLVCGHDDGTCALHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTAG 392
+LA +P G +L G +DGT + L + S V+ + FS +L++ G
Sbjct: 158 ALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLG 214
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 275 KTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNII 321
KT L GH G + SL ++F SGS D +VR WD + CV +
Sbjct: 248 KTEFRLWGHEGPITSLALDMTSIF-SGSWDMSVRIWDRSSMKCVKTL 293
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 189 HKGSIYCLAWSPAGDLLATGSNDKTVKL 216
H+G+ Y LA S GD L TG D +K+
Sbjct: 335 HEGTTYSLARSHTGDFLFTGGEDGGIKM 362
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 22 IESSDSRPTFKPVTVLEDLQAVRCAEFHPNGKLYAVGSNTKTLRICSY 69
+E ++ PT + +L +A C ++ P +AVGS KT+ IC Y
Sbjct: 84 LEGAEWVPT---LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 128
Score = 29.1 bits (62), Expect = 6.3
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELT 234
A PT+++ R + C+ WSP + A GS KTV + + N ++
Sbjct: 87 AEWVPTLVILRLNR---AALCVQWSPKENKFAVGSGAKTV-CICYYEQENNWWVSKLIRK 142
Query: 235 VHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVT 269
H+ +V V + N L + G C+++ T
Sbjct: 143 RHESSVTSVAW---HPNNVLLATTSTDGKCRVFST 174
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 22 IESSDSRPTFKPVTVLEDLQAVRCAEFHPNGKLYAVGSNTKTLRICSY 69
+E ++ PT + +L +A C ++ P +AVGS KT+ IC Y
Sbjct: 84 LEGAEWVPT---LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 128
Score = 29.1 bits (62), Expect = 6.3
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELT 234
A PT+++ R + C+ WSP + A GS KTV + + N ++
Sbjct: 87 AEWVPTLVILRLNR---AALCVQWSPKENKFAVGSGAKTV-CICYYEQENNWWVSKLIRK 142
Query: 235 VHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVT 269
H+ +V V + N L + G C+++ T
Sbjct: 143 RHESSVTSVAW---HPNNVLLATTSTDGKCRVFST 174
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 22 IESSDSRPTFKPVTVLEDLQAVRCAEFHPNGKLYAVGSNTKTLRICSY 69
+E ++ PT + +L +A C ++ P +AVGS KT+ IC Y
Sbjct: 84 LEGAEWVPT---LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 128
Score = 29.1 bits (62), Expect = 6.3
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 175 APTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDKTVKLMAFNTHACNLEGQEVELT 234
A PT+++ R + C+ WSP + A GS KTV + + N ++
Sbjct: 87 AEWVPTLVILRLNR---AALCVQWSPKENKFAVGSGAKTV-CICYYEQENNWWVSKLIRK 142
Query: 235 VHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVT 269
H+ +V V + N L + G C+++ T
Sbjct: 143 RHESSVTSVAW---HPNNVLLATTSTDGKCRVFST 174
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 30.7 bits (66), Expect = 2.1
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 20/208 (9%)
Query: 202 GDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRD----VCFIEDTTNKTSLLV 257
G+ AT +K +K+ F + +G+++ V + R +C+ ++ K+ +
Sbjct: 496 GEFFATAGVNKKIKI--FECESIIKDGRDIHYPVVELASRSKLSGICW--NSYIKSQVAS 551
Query: 258 SGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGG-AMFVSGSQDKTVRFWDLRTG 315
S G +++ D + + H V S+ Y+ + SGS D +V+ W + G
Sbjct: 552 SNFEGVVQVW--DVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSR-ALQRFTPHSS 374
+ I +K + +GR L G D +D+R + L H
Sbjct: 610 VSIGTIK------TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHK 663
Query: 375 DVRSVRFSPGAYYLLTAGYDGRVVLADL 402
V VRF + L+++ D + L DL
Sbjct: 664 TVSYVRFVDSS-TLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 30.7 bits (66), Expect = 2.1
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 20/208 (9%)
Query: 202 GDLLATGSNDKTVKLMAFNTHACNLEGQEVELTVHDGTVRD----VCFIEDTTNKTSLLV 257
G+ AT +K +K+ F + +G+++ V + R +C+ ++ K+ +
Sbjct: 496 GEFFATAGVNKKIKI--FECESIIKDGRDIHYPVVELASRSKLSGICW--NSYIKSQVAS 551
Query: 258 SGGAGDCKIYVTDCIIGKTFQALSGHSGHVLSL-YNWGG-AMFVSGSQDKTVRFWDLRTG 315
S G +++ D + + H V S+ Y+ + SGS D +V+ W + G
Sbjct: 552 SNFEGVVQVW--DVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 316 GCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCALHDVRGSR-ALQRFTPHSS 374
+ I +K + +GR L G D +D+R + L H
Sbjct: 610 VSIGTIK------TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHK 663
Query: 375 DVRSVRFSPGAYYLLTAGYDGRVVLADL 402
V VRF + L+++ D + L DL
Sbjct: 664 TVSYVRFVDSS-TLVSSSTDNTLKLWDL 690
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 ALSGHSGHV----LSLYNWGGAMFVSGSQDKTVRFWD 311
++ GH+ V SL+ G +SG DKTV+ WD
Sbjct: 243 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 ALSGHSGHV----LSLYNWGGAMFVSGSQDKTVRFWD 311
++ GH+ V SL+ G +SG DKTV+ WD
Sbjct: 269 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 280 LSGHSGHVLSLYNWGGA-MFVSGSQDKTVRFWDLRTGGCVNIIS 322
L GH V + G+ + S+D+TVR WD +G C +++
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLN 183
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 279 ALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIIS 322
+L GH+ V+SLY ++ SG+ D +++ W L C+ ++
Sbjct: 262 SLLGHTLAVVSLYVGANRLY-SGAMDNSIKVWSLDNLQCIQTLT 304
>At4g14310.1 68417.m02204 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 1087
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 343 GRLLVCGHDDGTCALHDVRGSRALQRFTP 371
G ++ HDDG+C+ +DV S ++P
Sbjct: 531 GEAVILAHDDGSCSYYDVANSEVKSVYSP 559
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 30.3 bits (65), Expect = 2.7
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 293 WGGA-MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHD 351
WGG +F S S+D +VR +DLR II +G+PS S +
Sbjct: 186 WGGVGVFASVSEDGSVRVFDLRDKEHSTIIY-ESGEPSTPLVRLSWNKQDPRYMATVIMG 244
Query: 352 DGTCALHDVR-GSRALQRFTPHSSDVRSVRFSP-GAYYLLTAGYDGRVVLADL 402
+ D+R + + H + V ++ ++P + ++ +AG D + ++ D+
Sbjct: 245 SAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDI 297
>At3g06650.1 68416.m00774 ATP-citrate synthase, putative /
ATP-citrate (pro-S-)-lyase, putative / citrate cleavage
enzyme, putative strong similarity to ATP:citrate lyase
[Capsicum annuum] GI:13160653; contains Pfam profiles
PF00549: CoA-ligase, PF02629: CoA binding domain
Length = 608
Score = 30.3 bits (65), Expect = 2.7
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 133 PTKREALKV-VMSLFDPL---GFVSPVTNRAKQLLQESINLFRDNSAPTAPTVLLKRTKH 188
PT EAL+V + FD L G VSP+ + E ++ + APT ++
Sbjct: 300 PTSFEALEVAIKETFDKLVEEGKVSPIKEVTPPQIPEDLSSAIKSGKVRAPTHIISTISD 359
Query: 189 HKGSIYCLAWSPAGDLLATG 208
+G C A P ++ G
Sbjct: 360 DRGEEPCYAGVPMSSIIEQG 379
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 387 YLLTAGYDG-RVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKT-AV 444
Y+ T D +VV+ D++ +P + RH V + W P + + D T A+
Sbjct: 234 YMATILMDSNKVVILDIRSPT---MPVAELERHQASVNAIAWAPQSCKHICSGGDDTQAL 290
Query: 445 LWTIPPV 451
+W +P V
Sbjct: 291 IWELPTV 297
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 387 YLLTAGYDG-RVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKT-AV 444
Y+ T D +VV+ D++ +P + RH V + W P + + D T A+
Sbjct: 234 YMATILMDSNKVVILDIRSPT---MPVAELERHQASVNAIAWAPQSCKHICSGGDDTQAL 290
Query: 445 LWTIPPV 451
+W +P V
Sbjct: 291 IWELPTV 297
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 387 YLLTAGYDG-RVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSADKT-AV 444
Y+ T D +VV+ D++ +P + RH V + W P + + D T A+
Sbjct: 234 YMATILMDSNKVVILDIRSPT---MPVAELERHQASVNAIAWAPQSCKHICSGGDDTQAL 290
Query: 445 LWTIPPV 451
+W +P V
Sbjct: 291 IWELPTV 297
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 29.9 bits (64), Expect = 3.6
Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 14/150 (9%)
Query: 256 LVSGGAGDCKIYVTDCIIGKTFQALSG-HSGH--VLSLYNWGGAMFVSGSQDKTVRFWDL 312
L SG + D +Y D G Q + H H V+ N +F + S DK V+ WDL
Sbjct: 556 LASGYSKDVALY--DIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDL 613
Query: 313 RTGGCVNIISPPAGQPSKGSAVASLAVDPSGR-LLVCGHDDGTCALHDVRGSRALQ-RFT 370
R S P S + P R LL D+ L V G L
Sbjct: 614 RQEP-----SRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLHLNFEIV 668
Query: 371 PHSSDVRSVR--FSPGAYYLLTAGYDGRVV 398
P S + R + G Y+++ D V+
Sbjct: 669 PRVSSMNYTRSYYMNGNDYIISGSCDENVI 698
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 29.5 bits (63), Expect = 4.8
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 297 MFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPSGRLLVCGHDDGTCA 356
+ S S DK V+ WD+ TG C + + AVA P +L+ G D T
Sbjct: 280 ILASASADKKVKVWDVATGTCKITME---HHTKEVQAVAWNHYAP--EVLLSGSFDQTVV 334
Query: 357 LHDVRGSRALQRFTPHSSDVRSVRFSPGAYYLLTA--------GYDGRVVLADLQGDLTC 408
+ D R SDV S+ + P + G+D R + DL
Sbjct: 335 MKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLN- 393
Query: 409 PLPSVPVARHPDKVISARWHPDDFSFLST-SADKTAVLWTI 448
P ++ V S ++ + L+T S DK+ LW +
Sbjct: 394 PTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDL 434
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 187 KHHKGSIYCLAWSPAGDLLATGSNDKTVKL 216
K + G++ C AWS G L TG D V++
Sbjct: 342 KSYYGALLCCAWSMDGKYLLTGGEDDLVQV 371
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 381 FSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSVPVARHPDKVISARWHPDDFSFLSTSAD 440
+SP ++ + D + + D++ P PS+ + H +V A WH +S S+D
Sbjct: 590 WSPDGLHISSGSADPVIHIFDIR--YNAPSPSLSMKAHKKRVFKAEWHSSYPLLVSISSD 647
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 330 KGSAVASLAVDPSGRLLVCGHDDGTCALHDV-----RGSRAL---QRFTPHSSDVRSVRF 381
+G+ + V GR++V G +DG ++ V RGSR L + H++ V +R
Sbjct: 3273 EGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRV 3332
Query: 382 SPGAYYLLTAGYDGRVVLADLQG-DLTCPLP--SVPV 415
S + ++ D V++ DL LP SVPV
Sbjct: 3333 SQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
>At3g13360.1 68416.m01681 expressed protein
Length = 459
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 273 IGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDK 305
+G+ F+ HSG+ + N G VSGSQ+K
Sbjct: 140 VGQAFEKSEEHSGNTIGGKNVVGGKVVSGSQEK 172
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 29.1 bits (62), Expect = 6.3
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 233 LTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCIIGKTFQALSGHSG---HVLS 289
L H G + C + + + L+S + ++ DC K+ + LS S H LS
Sbjct: 116 LDAHVGKIN--CVLWWPSGRCDKLISIDEQNIFLWSLDCS-KKSAEVLSKDSAGMLHSLS 172
Query: 290 LYNWG--GAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGSAVASLAVDPS-GRLL 346
W V+ + + +V+FWDLRT VN I + + V + +P +L
Sbjct: 173 GGAWDPHDVNAVAATGESSVQFWDLRTMKKVNSI--------EHAHVRGVDYNPKREHIL 224
Query: 347 VCGHDDGTCALHDVRGSRA-LQRFTPHSSDVRSVRFSPG-AYYLLTAGYDGRVVL 399
V D+ + D+R ++ +Q H+ +VR +P +L+AG D V L
Sbjct: 225 VTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNL 279
>At5g66650.1 68418.m08401 expressed protein contains Pfam domain,
PF04678: Protein of unknown function, DUF607
Length = 321
Score = 28.7 bits (61), Expect = 8.4
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 27 SRPTFKPVTVLEDLQAV-RCAEFH-PNGKLYAVGSN----TKTLRIC----SYPKIED-- 74
S P F P +ED++ + R AE KL +G N ++ +R+C S P+ +
Sbjct: 95 SSPEFFPAVTVEDVKKLMRAAEMELVKSKLREIGKNWVPYSEFVRVCGEYSSDPEQGNRV 154
Query: 75 VNLLETLGENENGNQVELYKPEEKTERVLGLI 106
N+L+ G ++ KPEE T + GLI
Sbjct: 155 ANMLDEAGNVIVLGKLVCLKPEELTSAMAGLI 186
>At5g49460.1 68418.m06119 ATP-citrate synthase, putative /
ATP-citrate (pro-S-)-lyase, putative / citrate cleavage
enzyme, putative strong similarity to ATP:citrate lyase
[Capsicum annuum] GI:13160653; contains Pfam profiles
PF00549: CoA-ligase, PF02629: CoA binding domain
Length = 608
Score = 28.7 bits (61), Expect = 8.4
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 133 PTKREALK-VVMSLFDPL---GFVSPVTNRAKQLLQESINLFRDNSAPTAPTVLLKRTKH 188
PT EAL+ + F+ L G VSP+ + E +N + APT ++
Sbjct: 300 PTSFEALESAIKETFEKLVEEGKVSPIKEVIPPQIPEDLNSAIKSGKVRAPTHIISTISD 359
Query: 189 HKGSIYCLAWSPAGDLLATG 208
+G C A P ++ G
Sbjct: 360 DRGEEPCYAGVPMSSIIEQG 379
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 371 PHSSDVRSVRFSPGAYYLLTAGYDGRVVLADLQGDLTCPLPSV 413
P + + SV F A LLTAG D R+ + G + S+
Sbjct: 242 PSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSI 284
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 28.7 bits (61), Expect = 8.4
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 22/208 (10%)
Query: 154 PVTNR-AKQLLQESINLFRDNSAPTAPTVLLKRTKHHKGSIYCLAWSPAGDLLATGSNDK 212
P TN A L+ ++L+R +S + V ++ + HK S + + G + T S D
Sbjct: 16 PSTNLVAAGLIDGHLHLYRYDS--DSSLVRERKVRAHKESCRAVRFIDDGQRIVTASADC 73
Query: 213 TVKLMAFNTHACNLEGQEVELTVHDGTVRDVCFIEDTTNKTSLLVSGGAGDCKIYVTDCI 272
++ T A + +E H+ V + + +TT + SG C + + D
Sbjct: 74 SILATDVETGA---QVAHLE-NAHEDAVNTLINVTETT-----IASGDDKGC-VKIWDTR 123
Query: 273 IGKTFQALSGHSGHVLSLYNWGGAMFVSGSQDKTVRFWDLRTGGCVNIISPPAGQPSKGS 332
+ H ++ G F S S V D C N+ + S+ S
Sbjct: 124 QRSCSHEFNAHEDYI------SGMTFASDSMKLVVTSGDGTLSVC-NLRTSKVQSQSEFS 176
Query: 333 A--VASLAVDPSGRLLVCGHDDGTCALH 358
+ S+ + +GR ++CG +GT L+
Sbjct: 177 EDELLSVVIMKNGRKVICGTQNGTLLLY 204
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,781,017
Number of Sequences: 28952
Number of extensions: 524662
Number of successful extensions: 2690
Number of sequences better than 10.0: 227
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1362
Number of HSP's gapped (non-prelim): 974
length of query: 451
length of database: 12,070,560
effective HSP length: 83
effective length of query: 368
effective length of database: 9,667,544
effective search space: 3557656192
effective search space used: 3557656192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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