Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000631-TA|BGIBMGA000631-PA|undefined
(254 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31870.1 68414.m03917 expressed protein 35 0.061
At3g21290.1 68416.m02690 dentin sialophosphoprotein-related cont... 32 0.33
At1g26150.1 68414.m03192 protein kinase family protein similar t... 32 0.33
At2g27100.1 68415.m03256 C2H2 zinc-finger protein SERRATE (SE) i... 32 0.43
At2g24590.1 68415.m02936 splicing factor, putative similar to to... 31 0.76
At4g10000.2 68417.m01637 expressed protein 31 1.00
At4g10000.1 68417.m01636 expressed protein 31 1.00
At3g08670.1 68416.m01007 expressed protein 30 1.3
At5g05940.1 68418.m00657 expressed protein contains Pfam profile... 29 3.1
At5g58880.1 68418.m07377 hypothetical protein 29 4.0
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 28 5.3
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 28 5.3
At1g23540.1 68414.m02960 protein kinase family protein contains ... 28 5.3
At5g09850.1 68418.m01139 transcription elongation factor-related... 28 7.0
At5g56890.1 68418.m07099 protein kinase family protein contains ... 27 9.3
At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger) fa... 27 9.3
At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger) fa... 27 9.3
At3g45610.1 68416.m04926 Dof-type zinc finger domain-containing ... 27 9.3
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 27 9.3
At1g49950.3 68414.m05604 DNA-binding protein, putative contains ... 27 9.3
At1g49950.2 68414.m05603 DNA-binding protein, putative contains ... 27 9.3
At1g49950.1 68414.m05602 DNA-binding protein, putative contains ... 27 9.3
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 27 9.3
>At1g31870.1 68414.m03917 expressed protein
Length = 561
Score = 34.7 bits (76), Expect = 0.061
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 49 STPYRSSLYLHSRESTPGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILRRD 108
S P R ++ SRES+ D++ + L RR GSP D++ S S RR
Sbjct: 204 SPPRRRHVHSPSRESSRKR-SDSVELDDDLSPPRRKRDLHGSPVSDVKKKSNDLSPPRRR 262
Query: 109 R-HSPSVTPPRRDTPS 123
R HSPS P RR + S
Sbjct: 263 RYHSPSPEPARRSSKS 278
Score = 31.1 bits (67), Expect = 0.76
Identities = 44/153 (28%), Positives = 59/153 (38%), Gaps = 12/153 (7%)
Query: 41 RCDVHGRCSTPYRSSLYLHSRESTPGYFRDAIS--PTNGLIIRRRDSCKSGSPARDLEHP 98
R D S P R S PG R T+ RRR S SP + +H
Sbjct: 109 REDTQSNISPPRRQRTRNDSPSPEPGPRRSVADRVDTDMSPPRRRKRHNSPSPEPNRKH- 167
Query: 99 STFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSN 158
T P L D P R D+PSP + +K S P R ++ + +R S +
Sbjct: 168 -TKPVSLDSDMSPPRKRKARNDSPSPEPE--AKYLSEDLSPP-RRRHVHSPSRESSRKRS 223
Query: 159 GVREMKRDYVGSTNSLPRKHRDLAASTNSLIRK 191
E+ D S PR+ RDL S S ++K
Sbjct: 224 DSVELDDDL-----SPPRRKRDLHGSPVSDVKK 251
>At3g21290.1 68416.m02690 dentin sialophosphoprotein-related
contains weak similarity to Dentin sialophosphoprotein
precursor (Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 1192
Score = 32.3 bits (70), Expect = 0.33
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 81 RRRDSCKSGSP-ARDLEHPST-FPSILRRDRHSPSVTPPRRDTPSPTQKYH----SKRHS 134
R+ SC S ++D +H + + LR S ++ P R S +K + S +HS
Sbjct: 715 RKSQSCNQLSAVSKDSQHSELKYDAELRNASASQTIDPLRGLLKSSIEKSNRHGKSNKHS 774
Query: 135 --MGSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRD 180
+G+ +G+ F S S R+ +RD V N PR +D
Sbjct: 775 DALGNVRKSDKGDHFPLEMLSSRSGKAFRDNQRDDVHLKNKFPRNKKD 822
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 87 KSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKR 132
+ +P D EHPS P + R P +R TPSP SKR
Sbjct: 206 RPSTPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSKR 251
>At2g27100.1 68415.m03256 C2H2 zinc-finger protein SERRATE (SE)
identical to C2H2 zinc-finger protein SERRATE
GI:14486602 from [Arabidopsis thaliana]
Length = 720
Score = 31.9 bits (69), Expect = 0.43
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 78 LIIRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRD-----TPSPTQKYHSKR 132
L +RR + RD+E P P+ RDR SP + PPRRD + SP Y +R
Sbjct: 46 LPLRRERDSRERRDERDIERPP--PNRRERDR-SP-LPPPRRDYKRRPSLSPPPPYRDRR 101
Query: 133 HS 134
HS
Sbjct: 102 HS 103
>At2g24590.1 68415.m02936 splicing factor, putative similar to to
RSZp22 protein [Arabidopsis thaliana]
gi|2582645|emb|CAA05352
Length = 196
Score = 31.1 bits (67), Expect = 0.76
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 66 GYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPT 125
G+F G RRR +S SP R + P T+ + S PPRR +PSP
Sbjct: 105 GHFARECRSRGGSGGRRRSRSRSRSPPRYRKSP-TYGGRRSYSPRARSPPPPRRRSPSPR 163
Query: 126 QKYHSK 131
+ +S+
Sbjct: 164 GRNYSR 169
>At4g10000.2 68417.m01637 expressed protein
Length = 333
Score = 30.7 bits (66), Expect = 1.00
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 133 HSMGSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRDLAASTNS 187
H SFP+ S + +++R S + N VRE +R YV S+NS +K S+++
Sbjct: 12 HPTASFPS-SMVHSNRFSKRISGNGNWVRERRRLYVKSSNSEGKKEEAAQKSSSN 65
>At4g10000.1 68417.m01636 expressed protein
Length = 333
Score = 30.7 bits (66), Expect = 1.00
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 133 HSMGSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRDLAASTNS 187
H SFP+ S + +++R S + N VRE +R YV S+NS +K S+++
Sbjct: 12 HPTASFPS-SMVHSNRFSKRISGNGNWVRERRRLYVKSSNSEGKKEEAAQKSSSN 65
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 41 RCDVHGRCSTPYRSSLYLHSRESTPGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPST 100
R R STP R+S SR STP R S ++ R S + +P + ++
Sbjct: 199 RSSSSARPSTPTRTSSA--SRSSTPSRIRPGSSSSSMDKARPSLSSRPSTPTSRPQLSAS 256
Query: 101 FPSILRRDRHSPSVTPPRRDTPSPT 125
P+I+ +S TP RR +PS T
Sbjct: 257 SPNIIASRPNSRPSTPTRR-SPSST 280
>At5g05940.1 68418.m00657 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 611
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 29 SPLVSSVIEHD---PRCDVHGRCSTPYRSSLYLHSRESTPGYFRDAISPTNG 77
SP VSS+I H P + TPYR+S +TPG+ ISP G
Sbjct: 481 SPAVSSIIAHKKVVPLPYLISASGTPYRTSF-----STTPGFSPSMISPKKG 527
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 28.7 bits (61), Expect = 4.0
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 81 RRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVT-PPRRDTPSPTQKYHSKRHSMGSFP 139
+RR++ G+ + L+ P + PS++ + R+ + P+ + P+ T + S+ +
Sbjct: 268 KRRNNSSDGTTVKGLQIPGSAPSVMLQGRNPFDIPYDPQEERPNLTGDSFDQEFSLFNQK 327
Query: 140 NLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRDL 181
+L ++ R S V+ M S S RK DL
Sbjct: 328 DLFFCRHESFCRFSLFSPEHVQCMNSPVSASDISTTRKRLDL 369
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 43 DVHGRCSTPYRSSL-YLHSRESTPGYFRDAISPTNGLI 79
DV R S +L YLHS STP Y RD + TN L+
Sbjct: 481 DVRLRISVEIAGALAYLHSAASTPVYHRD-VKTTNILL 517
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 43 DVHGRCSTPYRSSL-YLHSRESTPGYFRDAISPTNGLI 79
DV R S +L YLHS STP Y RD + TN L+
Sbjct: 518 DVRLRISVEIAGALAYLHSAASTPVYHRD-VKTTNILL 554
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 72 ISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILRRDRHS-----PSVTPPRRDTPSPTQ 126
+ PTN I+ S PA PS FP++ + S PS+T P + TP+P Q
Sbjct: 172 LDPTNPPPIQPSGPATS-PPANPNAPPSPFPTVPPKTPSSGPVVSPSLTSPSKGTPTPNQ 230
>At5g09850.1 68418.m01139 transcription elongation factor-related
low similarity to SP|P10712 Transcription elongation
factor S-II (Transcription elongation factor A) {Mus
musculus}
Length = 353
Score = 27.9 bits (59), Expect = 7.0
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Query: 50 TPYRSSLYLHSRESTPGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILRRDR 109
+P + +L+ SR+ P + + P NG S K+ + P P + R
Sbjct: 219 SPVQKALHNGSRQQVPDFGYSPV-PQNGY----SSSSKNSNITEPERKPR--PVAPQPRR 271
Query: 110 HSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRES 154
SPS P R +PS K H F + NY + E+
Sbjct: 272 ESPSPAKPSRPSPSQQTIPRDKEHKEVDFDTARKRLQQNYRQAEN 316
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 98 PSTFPSILRRDRHS----PSVTPPRRDTPSPTQKYHS 130
PS PS + +RHS PS TPP TPS + S
Sbjct: 300 PSIAPSAPKFNRHSHHTSPSTTPPPDSTPSNVHHHPS 336
>At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 520
Score = 27.5 bits (58), Expect = 9.3
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 22/196 (11%)
Query: 6 KVIAMRQLDSMFGNLTLEGEGRHSPLVSSVIEHDPRCDVHGRCSTPYRSSLYLHSRESTP 65
KVI RQL S+ L+ + S SSV E P + S++ +HS S
Sbjct: 95 KVIGRRQLSSL-----LDMDSSES---SSVNEDSPTSERSLPRGKTKESTISVHSESSVS 146
Query: 66 G-YFRDAISPTNGL---IIRRRDSCKSGSPARDLEH---PSTFPSILRRDRH-SPSVTPP 117
G +A S + G I +R D + + E S + LR R+ S S P
Sbjct: 147 GEVVTEAGSSSRGTGRSIHQRPDLVSRDARVSNSEQNARASVNKNGLRDLRNKSGSDVLP 206
Query: 118 RRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRK 177
TP+ K+ S G + SRG N+ E G G T S PR+
Sbjct: 207 SNSTPTRKSNIFRKKTSDGESSSSSRG-----NKTEGSVVGGKNISSPQGNGITMSEPRR 261
Query: 178 HRDL-AASTNSLIRKS 192
+R+L + NS++ S
Sbjct: 262 NRNLPSVRDNSVVSSS 277
>At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 520
Score = 27.5 bits (58), Expect = 9.3
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 22/196 (11%)
Query: 6 KVIAMRQLDSMFGNLTLEGEGRHSPLVSSVIEHDPRCDVHGRCSTPYRSSLYLHSRESTP 65
KVI RQL S+ L+ + S SSV E P + S++ +HS S
Sbjct: 95 KVIGRRQLSSL-----LDMDSSES---SSVNEDSPTSERSLPRGKTKESTISVHSESSVS 146
Query: 66 G-YFRDAISPTNGL---IIRRRDSCKSGSPARDLEH---PSTFPSILRRDRH-SPSVTPP 117
G +A S + G I +R D + + E S + LR R+ S S P
Sbjct: 147 GEVVTEAGSSSRGTGRSIHQRPDLVSRDARVSNSEQNARASVNKNGLRDLRNKSGSDVLP 206
Query: 118 RRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRK 177
TP+ K+ S G + SRG N+ E G G T S PR+
Sbjct: 207 SNSTPTRKSNIFRKKTSDGESSSSSRG-----NKTEGSVVGGKNISSPQGNGITMSEPRR 261
Query: 178 HRDL-AASTNSLIRKS 192
+R+L + NS++ S
Sbjct: 262 NRNLPSVRDNSVVSSS 277
>At3g45610.1 68416.m04926 Dof-type zinc finger domain-containing
protein identical to dof6 zinc finger protein GI:5689615
from [Arabidopsis thaliana]
Length = 245
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 106 RRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFN 148
R+ + S S T R TP PT + K SF + NI N
Sbjct: 90 RKHKRSSSATKSLRTTPEPTMTHDGKSFPTASF-GYNNNNISN 131
>At3g05470.1 68416.m00599 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 884
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 85 SCKSGSPARDLEHPSTFPSILRRD-RHSPSVTPPRRDTPSPTQKYHSKR-HSMGS 137
S GS R EH P R D S S PP P P ++ +KR H++ S
Sbjct: 337 SVNVGSSQRFSEHKLDIPECSRSDFGISVSAPPPPPPPPPPLPQFSNKRIHTLSS 391
>At1g49950.3 68414.m05604 DNA-binding protein, putative contains
similarity to DNA-binding protein PcMYB1 [Petroselinum
crispum] gi|2224899|gb|AAB61699
Length = 300
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 151 RRESISSNG--VREMKRDYVGSTNSLPRKHRDLAASTNSLIRKSREHIGSMNSL 202
R S+ +NG RE R V T SLP++ + A TNSL + E++ + + L
Sbjct: 54 RNMSVMANGWGSREKSRLAVKRTFSLPKQEENSLALTNSL-QSDEENVDATSGL 106
>At1g49950.2 68414.m05603 DNA-binding protein, putative contains
similarity to DNA-binding protein PcMYB1 [Petroselinum
crispum] gi|2224899|gb|AAB61699
Length = 300
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 151 RRESISSNG--VREMKRDYVGSTNSLPRKHRDLAASTNSLIRKSREHIGSMNSL 202
R S+ +NG RE R V T SLP++ + A TNSL + E++ + + L
Sbjct: 54 RNMSVMANGWGSREKSRLAVKRTFSLPKQEENSLALTNSL-QSDEENVDATSGL 106
>At1g49950.1 68414.m05602 DNA-binding protein, putative contains
similarity to DNA-binding protein PcMYB1 [Petroselinum
crispum] gi|2224899|gb|AAB61699
Length = 300
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 151 RRESISSNG--VREMKRDYVGSTNSLPRKHRDLAASTNSLIRKSREHIGSMNSL 202
R S+ +NG RE R V T SLP++ + A TNSL + E++ + + L
Sbjct: 54 RNMSVMANGWGSREKSRLAVKRTFSLPKQEENSLALTNSL-QSDEENVDATSGL 106
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 SILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPN 140
SI R S SVTP RR SPT K + ++ S S P+
Sbjct: 8 SISPRRHRSRSVTPKRR---SPTPKRYKRQKSRSSTPS 42
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,475,273
Number of Sequences: 28952
Number of extensions: 285776
Number of successful extensions: 794
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 28
length of query: 254
length of database: 12,070,560
effective HSP length: 79
effective length of query: 175
effective length of database: 9,783,352
effective search space: 1712086600
effective search space used: 1712086600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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