Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000631-TA|BGIBMGA000631-PA|undefined
(254 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0012 + 71903-72935,73468-73981,74619-76008 36 0.032
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 33 0.17
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 32 0.52
05_01_0299 - 2322204-2322734,2324089-2326164 30 1.6
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 29 2.8
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 29 2.8
03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,453... 29 2.8
12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613 29 3.7
09_06_0260 - 21911358-21911438,21911715-21911828,21911911-219120... 29 3.7
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 29 3.7
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 29 3.7
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527... 29 3.7
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 29 4.8
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 28 6.4
09_04_0377 + 17086775-17088310 28 6.4
04_04_0347 + 24564589-24565296 28 6.4
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 28 6.4
05_03_0408 + 13601576-13601748,13601795-13602104,13602597-136028... 28 8.4
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282... 28 8.4
04_03_0153 + 11919769-11919880,11920190-11920488,11921909-119220... 28 8.4
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 28 8.4
03_01_0180 + 1456182-1456359,1456444-1456520,1456570-1456692,145... 28 8.4
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 28 8.4
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 35.9 bits (79), Expect = 0.032
Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 83 RDSCKSGSP-ARDLEHPSTFPSILRRDRHSPSVTPPRRDTP-----SPTQKYHSKRHSMG 136
R +S SP AR + S P RR R S S +PP R T SP++ YHSK S
Sbjct: 512 RGKSRSPSPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHTRGRRSRSPSRSYHSKYGSDR 571
Query: 137 SFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRDLAASTNSLIRKSREHI 196
S+ + R RRES S S + PR + + + S R E +
Sbjct: 572 SYRD-DRDKYGRSGRRESDRSRDHYSSSSRRNRSRSISPRHKKSSRSDSRSPKRHREESL 630
Query: 197 GSMNS 201
S
Sbjct: 631 SPSKS 635
>07_03_0539 -
19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 33.5 bits (73), Expect = 0.17
Identities = 40/152 (26%), Positives = 56/152 (36%), Gaps = 9/152 (5%)
Query: 102 PSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVR 161
P+I D PS P RD S Q H R S GS + +Y R S +G R
Sbjct: 123 PTITDEDGRGPS--PSHRDG-SYRQDTHKSRSSQGSHSRSTPRRYDDYEDRGSRDKHGER 179
Query: 162 EMKRDYVGSTNSLPRKHRDLAASTNSLIRKSREHIGSMNSLXXXXXXXXXXXXXXXLDFW 221
E +G ++S R H D S N R RE S++ +
Sbjct: 180 ERSAS-IGYSSSGRRGHHDDRESHNR--RDERERSTSVDYMNKRSRHEHSSRSSRTPA-- 234
Query: 222 HNTWDSDKDNLVSSPENDDRFSTVHNNKRRKP 253
+ WDS + +P + R N+ R+ P
Sbjct: 235 RSDWDSGRWEWEDTPRREYR-DDRSNSHRQHP 265
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 31.9 bits (69), Expect = 0.52
Identities = 39/128 (30%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 47 RCSTPYRSSLYLHSRESTPGYFRDAISPTNGLIIRRRDS-CKSGSPARDLEHPSTFPSIL 105
R S R S S G RD+ SP RDS GSP RD + P P
Sbjct: 172 RDSRNERRSRSPRDSRSPRGSPRDSRSPRGS----PRDSRSPKGSP-RDTQSPRGSPRDS 226
Query: 106 RRDRHSPSVTPPRRDTPSP-TQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMK 164
R R S S R +P+P + + R S SR + R S ++NG
Sbjct: 227 RSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADSRSPADHERRDMSTAANGRSPSP 286
Query: 165 RDYVGSTN 172
RDY + N
Sbjct: 287 RDYEDNGN 294
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 116 PPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLP 175
P + D P P+++ SKR S+ +S F+ + R S +R K +GS L
Sbjct: 348 PVKDDKPIPSKRGSSKRDSLHRQKLMS----FDKSSRALGSKGSLRSSKHSSLGSA-VLD 402
Query: 176 RKHRDLAASTNSLIRKS 192
RK R + ST S ++ S
Sbjct: 403 RKCRSFSDSTTSSLKAS 419
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 81 RRRDSCKSGSPARDLEHPSTFPS-ILRRDRH-SPSVTPPRRDTPSPTQKYHSKR 132
RR +S SPARD P S RR+R +P PRR +P T H +R
Sbjct: 219 RRSGRSRSRSPARDRGSPPRRRSPPARRERSPAPRSRSPRRRSPVKTTSSHRER 272
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 27 RHSPLVSSVIEHDPRCDVHGRCSTPYRSSLYLHSRESTPGY-FRDAISPTNGLIIRRRDS 85
RH + + P D+ G TP L +H + P Y RDA+ PTN ++I++ D
Sbjct: 258 RHGDVGDADRPVSPYSDIPGVRFTPTDQELIIHFLK--PKYNLRDAM-PTNIIVIKQLDV 314
Query: 86 CK 87
CK
Sbjct: 315 CK 316
>03_01_0617 +
4532651-4532893,4534713-4534939,4535077-4535150,
4535753-4535809,4535940-4536280,4536979-4537047,
4537152-4537219,4537404-4539569,4540101-4540178,
4540326-4540437,4540722-4540772,4540886-4540936
Length = 1178
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 136 GSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRDLAASTNSLIRKSRE 194
G+ P L R + N S+ S + K DY+G+T+SL + + L + + S+E
Sbjct: 626 GAKPKLKRCSA---NENSSVMSGSAKRAKADYLGTTSSLSEQRQTLPLDKHVNEKLSKE 681
>12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613
Length = 787
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 103 SILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGS--FPNLSR 143
++LR D PS+ PP + P P HS+ + + FP+L+R
Sbjct: 511 NVLRFDAPLPSLPPPAKMPPPPGAPSHSRLPLLAADLFPSLTR 553
>09_06_0260 -
21911358-21911438,21911715-21911828,21911911-21912033,
21912342-21912419,21912498-21912647,21913505-21913601,
21913679-21913860,21913899-21913982,21914243-21914303,
21914414-21914506,21914588-21914782,21914937-21915006,
21915536-21915572,21915654-21915737,21915828-21915885,
21916008-21916084,21916185-21916244,21916325-21916687
Length = 668
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 65 PGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPS 113
P Y + P + I + S +G D++HP +RR+ H+P+
Sbjct: 280 PEYRVVLVKPEEAMHINKSFSLSNGHAVYDIQHPCRANVAVRRELHTPA 328
>08_01_0889 +
8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 65 PGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPS 113
P Y + + P + R S +G D +HP +RR+ H+P+
Sbjct: 278 PEYRVEFVKPDEAAHLERNFSLANGYAVHDAQHPCRANVAVRRELHTPA 326
>06_01_0018 +
194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 106 RRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMKR 165
R+ SPS T R+T S + + H+ + +R ++ S S+N
Sbjct: 3 RKKASSPSPTSTARETRSSSARGHASPTPTPTLRRSTRETTSRFSSSSSSSANKHEGSPA 62
Query: 166 DYVGSTNSLPRKHRDLAASTNSL-IRKSRE 194
+ N+ RK + AA T++ I+K+++
Sbjct: 63 KQSANNNTAKRKMNNAAADTSTRPIKKNKK 92
>02_01_0706 +
5270233-5270326,5270767-5270914,5271018-5271089,
5271153-5271263,5271363-5271434,5271533-5271604,
5272126-5272197,5272281-5272346,5272426-5272491,
5272601-5272971,5273203-5273456,5273886-5274157,
5274333-5274474,5275174-5275313,5275381-5275537,
5275797-5275965,5276048-5276088
Length = 772
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 112 PSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISS 157
PS PP P P K + K P+LS +++N+N+ S
Sbjct: 289 PSSPPPPMSPPPPAVKENLKHKPEPLKPSLSHSSMYNHNQHRKSHS 334
>03_06_0140 +
31951569-31951710,31951943-31952037,31952141-31953982,
31954065-31954179,31954260-31954897
Length = 943
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 81 RRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTP 122
RRR+ SPA S+ ++L RD HS S P R P
Sbjct: 21 RRRERLGFDSPAPPQRTSSSNAAVLPRDSHSSSQRPHRSQKP 62
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 90 SPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQ 126
SP D PS + P++TPPR TP+P Q
Sbjct: 554 SPPHDPLAPSLPQAPAATPPQDPALTPPRAPTPTPPQ 590
>09_04_0377 + 17086775-17088310
Length = 511
Score = 28.3 bits (60), Expect = 6.4
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 65 PGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHP-STFPSILRRDRHSPSVTPPRRDTPS 123
PG R + SP+ RRR +S SP R+ S P RRDR SPS P RD
Sbjct: 15 PGRSRVSASPSPR---RRRSPSRSPSPRRNRRRDRSPSPYRSRRDR-SPS---PYRDRRR 67
Query: 124 PTQKYHSKR 132
YH R
Sbjct: 68 QWSPYHRDR 76
>04_04_0347 + 24564589-24565296
Length = 235
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 110 HSPSVTPPRRDTPSPTQKYHSKRH 133
H+P+ P R D PSP+ +H H
Sbjct: 78 HAPAPAPVRDDKPSPSHHHHHHGH 101
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 81 RRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGS 137
RRR +S SP+ D E S RR R RRDTPS + S+ GS
Sbjct: 14 RRRRRQRSRSPS-DSEEASDSSGSPRRSRSRNRRKSRRRDTPSSSDASDSQASDSGS 69
>05_03_0408 +
13601576-13601748,13601795-13602104,13602597-13602834,
13603014-13603364,13603457-13603542,13603685-13603759,
13604241-13604542,13605359-13605622,13606032-13606806
Length = 857
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 221 WHNTWDSDKDNLVSSPENDDRFSTVHNNKRRKPY 254
W +D D N + +P+NDD V + PY
Sbjct: 194 WERIYDFDYYNDLGNPDNDDHVRPVLGGTKTHPY 227
>05_01_0361 -
2824728-2826043,2826288-2826507,2827616-2827702,
2827726-2827980,2828704-2828733
Length = 635
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 97 HPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFN-YNRRE-- 153
+P P + R P+ PRR P K H KR L +F+ Y +
Sbjct: 344 YPEASPVLPRYFSPYPASFVPRRPLPVNVHKIHEKRLVGADMVELPDAAVFSRYTAPDFS 403
Query: 154 SISSNGVREMKR-DYVGSTNSLPRKHRDLAASTNSLIRKSRE 194
S N V++ K+ +Y S+ + ++ + AS+++ S++
Sbjct: 404 GTSENAVQDNKKEEYTESSPASEQESKSHTASSSATRSPSQQ 445
>04_03_0153 +
11919769-11919880,11920190-11920488,11921909-11922024,
11922113-11922248,11922959-11923006,11924130-11924228,
11924317-11924385,11924465-11924599,11924687-11924755,
11925221-11925276,11925465-11925624,11926534-11926698,
11927484-11927568,11927646-11927849,11928396-11928487,
11928571-11928613,11930727-11930884,11931520-11931630,
11931947-11932012,11933716-11933784,11934181-11934255,
11934330-11934506,11934598-11934683,11936259-11936313,
11936901-11936939,11938105-11938230,11938319-11938432,
11939208-11939265,11939485-11939623,11939698-11939783,
11939842-11940041
Length = 1148
Score = 27.9 bits (59), Expect = 8.4
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 51 PYRSSLYLH-SRESTPGYF---RDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILR 106
P+ + L LH S P F RD + G++ RR S +S + A + P+ L
Sbjct: 49 PFSAYLVLHKSGIPLPPNFLHRRDLVR-ARGILPVRRSSARSSTTALTCPAAAGDPNSLA 107
Query: 107 RDRHSPSVTPPRRDTPSPTQ-KYHSKRHSMGSF 138
DR ++ P + PS TQ HS S+ SF
Sbjct: 108 NDRKRDAI-PKQPVAPSSTQLARHSPVPSIASF 139
>03_05_0967 +
29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 24 GEGRHSPLVSSVIEHDPRCDVHGRCSTPYRSSLYLHSRESTPGYFRDAISPTNGLIIRRR 83
G+ H + E D DV+GR S YR+ S+ G + +N ++ R+
Sbjct: 604 GKEEHKKRLPVSSEGDNATDVNGRSSPSYRTRGSPRGVRSSKGSSAREVESSNEILPRQT 663
Query: 84 DSCKSGSPARDLEHP 98
S K + ++ ++P
Sbjct: 664 TSLKRNNDSQREKNP 678
>03_01_0180 +
1456182-1456359,1456444-1456520,1456570-1456692,
1456783-1456896,1457580-1457666,1458040-1458179,
1458253-1458340,1459125-1459198,1461147-1461340,
1461430-1461632,1461955-1462001,1462084-1462336,
1462551-1462568
Length = 531
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 90 SPA-RDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQ 126
SPA + + P T P+I+ +R SP+ P R +P+ TQ
Sbjct: 490 SPASNNPQSPGTLPTIISPER-SPASQAPSRSSPNSTQ 526
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 84 DSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPR---RDTPSPTQKYHSKRHSMGSF 138
D KS P+ + H + P + RD++ + P +DT P H+ RH + SF
Sbjct: 77 DPNKSNLPSISIIHEAVGP-LESRDQNKTAAFPSTSGVQDTGEPNSALHNVRHELDSF 133
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,038,654
Number of Sequences: 37544
Number of extensions: 360746
Number of successful extensions: 1020
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1007
Number of HSP's gapped (non-prelim): 27
length of query: 254
length of database: 14,793,348
effective HSP length: 80
effective length of query: 174
effective length of database: 11,789,828
effective search space: 2051430072
effective search space used: 2051430072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -