Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000631-TA|BGIBMGA000631-PA|undefined
(254 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2) 35 0.074
SB_6201| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_56923| Best HMM Match : PT (HMM E-Value=0.95) 34 0.13
SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_44979| Best HMM Match : PkinA_anch (HMM E-Value=2.6) 31 0.69
SB_49280| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15) 31 1.2
SB_10884| Best HMM Match : Antimicrobial11 (HMM E-Value=0.091) 31 1.2
SB_55739| Best HMM Match : Protamine_P2 (HMM E-Value=1.9) 30 1.6
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 30 1.6
SB_44354| Best HMM Match : APC_15aa (HMM E-Value=0.88) 30 2.1
SB_27059| Best HMM Match : APC_15aa (HMM E-Value=0.88) 30 2.1
SB_5913| Best HMM Match : RVT_1 (HMM E-Value=1.2) 30 2.1
SB_147| Best HMM Match : LepA_C (HMM E-Value=0.73) 30 2.1
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 30 2.1
SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_58939| Best HMM Match : Motile_Sperm (HMM E-Value=3.4) 29 3.7
SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7) 29 3.7
SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_22024| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.2) 29 3.7
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_16986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_43519| Best HMM Match : Pre-SET (HMM E-Value=0.37) 29 4.9
SB_25882| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 6.5
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_8212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 28 6.5
SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_8320| Best HMM Match : p450 (HMM E-Value=0) 28 8.5
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 37.1 bits (82), Expect = 0.014
Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 81 RRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPN 140
RRRDS RD PS P RR R SPS +PPRR SP+ R S P
Sbjct: 898 RRRDSYSPSRRRRDSPTPSPPP---RRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQ 954
Query: 141 LSRGNIFNYNRRESISSNGVREMKRDYVGSTNS 173
R + RR E R NS
Sbjct: 955 RKRASTPPSPRRARRKVASPEEQDRQKSNGRNS 987
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 82 RRDSCKSGSPARDLEH-PSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFP 139
RRD + SP R PS P RRD +SPS RRD+P+P+ +R S P
Sbjct: 874 RRDRKRYDSPPRRRRRSPSPPPRRRRRDSYSPS--RRRRDSPTPSPPPRRRRKSPSPSP 930
Score = 31.1 bits (67), Expect = 0.92
Identities = 28/112 (25%), Positives = 41/112 (36%)
Query: 81 RRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPN 140
RR S SP R E P R +PPRRD +R S P
Sbjct: 837 RRSASGSDSSPHRRSESPRDRRRRSPEHRRRREASPPRRDRKRYDSPPRRRRRSPSPPPR 896
Query: 141 LSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRDLAASTNSLIRKS 192
R + ++ +RR S +R + S PR+ R +++ +R S
Sbjct: 897 RRRRDSYSPSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSS 948
Score = 31.1 bits (67), Expect = 0.92
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 82 RRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTP-PRRDTPSPTQKYHSKRHSMGSFPN 140
RR P R S PS RRD +PS P RR +PSP+ +R S P
Sbjct: 885 RRRRRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPP 944
Query: 141 LSRGNIFNYNRRESISSNGVREMKR 165
+ + R+ + + R +R
Sbjct: 945 MRSSPLPPPQRKRASTPPSPRRARR 969
>SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2)
Length = 436
Score = 34.7 bits (76), Expect = 0.074
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 88 SGSPARDLEHPSTFPSILRRDRHSPSVTPP-RRDTPSPTQKYHSKRHSMGSFPNLSRGNI 146
SGSP FP + PS+ RD PSP+ + F SR +
Sbjct: 69 SGSPGES----DVFPKEIPTTAQLPSMASDFSRDCPSPSTPTRKRPDGYTPFSPFSRCGV 124
Query: 147 FNYNRRESISSNGVREMKRDYVGSTNSLPRK 177
+ RR + N V M RD G S P +
Sbjct: 125 NSIRRRSKYNQNLVEGMHRDEAGYRTSSPMR 155
>SB_6201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 70 DAISPTNGLIIRRRDSCKSGS----PARDLEHPSTFPSILRRDRHSPSVTP--PRRDTPS 123
DA SP++ ++ R D+ S P D + PS+ P + R D SPS +P PR D S
Sbjct: 56 DADSPSSSPLLPRIDADSPSSSPLLPRIDADSPSSSPLLPRIDADSPSSSPLLPRVDADS 115
Query: 124 PT 125
P+
Sbjct: 116 PS 117
>SB_56923| Best HMM Match : PT (HMM E-Value=0.95)
Length = 441
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 86 CKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPT 125
C SP HPS FPS + H PS++P TP P+
Sbjct: 336 CDPFSPTSSAGHPSPFPSPI--GSHGPSISPAGLPTPDPS 373
>SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 82 RRD--SCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRD--TPSPTQKYHSKRHSMGS 137
RRD S + +P RD S + LRRD+ S S PRRD + S T H R + +
Sbjct: 706 RRDKRSDSNATPRRDKRSDSN--ATLRRDKKSDSNATPRRDEKSDSITSSSHETRSDINA 763
Query: 138 FPNLSRGN 145
P ++ N
Sbjct: 764 TPLAAKSN 771
>SB_44979| Best HMM Match : PkinA_anch (HMM E-Value=2.6)
Length = 180
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 87 KSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNL-SRGN 145
+S P DL++P+ LRR T P D PSPT+ + + R S + +L S
Sbjct: 71 RSTKPHEDLQNPTKIYETLRRS------TKPYEDLPSPTKIHDTLRRSTKHYADLRSPAR 124
Query: 146 IFNYNRR 152
I+ RR
Sbjct: 125 IYKTLRR 131
>SB_49280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.1 bits (67), Expect = 0.92
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 61 RESTPGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRD 120
RE Y A+S + L+ ++RDS SG ++ E+ +++R+R PS R
Sbjct: 160 REMESPYPTIAVSEADRLLGKQRDSLYSGYSEKEKENFEVSEKLIQRERGVPS----RES 215
Query: 121 TPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSN 158
+P ++ + + F +R N+RE ++N
Sbjct: 216 SPLASELWKGTENPCEKFERTNRAR--PGNKREEETAN 251
>SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15)
Length = 794
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 80 IRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDT-PSPTQKYHSKRHSMGSF 138
+ R D+C + P R L P P+ L P+ R T P P + H F
Sbjct: 481 VTRNDTCGASRPGRPLPPPPDMPAYLLTKPLPPTPVDNRMKTKPLPLPPRDNYNHMRQMF 540
Query: 139 PNLSRGN 145
P R N
Sbjct: 541 PATLRNN 547
>SB_10884| Best HMM Match : Antimicrobial11 (HMM E-Value=0.091)
Length = 479
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 50 TPYRSSLYLHSRESTPGY---FRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILR 106
TPY + L +R+ P D PT+ R+ P D +P+ + R
Sbjct: 171 TPYPTHLSTDNRKERPNLKLPTEDTPYPTHLSTDNRKGRPNLKLPTEDTPYPTHLSTDNR 230
Query: 107 RDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNL 141
+ R P++ P DTP+PT H + PNL
Sbjct: 231 KGR--PNLKLPTEDTPNPT---HLSTDNRKGRPNL 260
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 50 TPYRSSLYLHSRESTPGY---FRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTFPSILR 106
TP S L +R+ P D +PT+ R+ P D +PS + R
Sbjct: 3 TPNPSHLSTDNRKGRPNLKLPTEDTPNPTHLSTDNRKGRPNLKLPTEDTPNPSHLSTDTR 62
Query: 107 RDRHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNL 141
R P++ P DTP+PT H + PNL
Sbjct: 63 EGR--PNLKLPTEDTPNPT---HLSTDTREGRPNL 92
>SB_55739| Best HMM Match : Protamine_P2 (HMM E-Value=1.9)
Length = 678
Score = 30.3 bits (65), Expect = 1.6
Identities = 34/146 (23%), Positives = 51/146 (34%), Gaps = 7/146 (4%)
Query: 61 RESTPGYFRDAISPTNGLI---IRR--RDSCKSGSPARDLEHPSTFPSILRRDRHSPSVT 115
R PGY D+ ++ +RR R S K R +H S R +R +
Sbjct: 430 RPHNPGYIADSEEDQLKMLQAQLRRMHRQSRKRSGSGRHRQHNDLPRSQTREERQHTDL- 488
Query: 116 PPRRDTPSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLP 175
PR T +K K + + +++ ES+ + E D T+ LP
Sbjct: 489 -PRSQTRKERRKGTGKSTKVDVSLEERGSSSDSWDSEESLHVRPLSEQFYDSASDTSPLP 547
Query: 176 RKHRDLAASTNSLIRKSREHIGSMNS 201
RK R L + H G S
Sbjct: 548 RKLRSATLDDRQLPSRRATHHGRRTS 573
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 80 IRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSK 131
+ +R K G A +++ PST+ + HSP VT P S Q H K
Sbjct: 426 MNKRTKPKPGERATEIKSPSTY-QVTTMVTHSPRVTEPASPIASTKQVTHLK 476
>SB_44354| Best HMM Match : APC_15aa (HMM E-Value=0.88)
Length = 292
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 83 RDSCKSGSPARDLEHPSTFPSIL-RRDRHSPSVTPPRRDTPSPT 125
+D+C G+ + HP+ P ++ +R+R S + P +DT PT
Sbjct: 183 KDTCNKGT---QVSHPNDDPWVIHQRERRSSNTVPNPQDTDQPT 223
>SB_27059| Best HMM Match : APC_15aa (HMM E-Value=0.88)
Length = 292
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 83 RDSCKSGSPARDLEHPSTFPSIL-RRDRHSPSVTPPRRDTPSPT 125
+D+C G+ + HP+ P ++ +R+R S + P +DT PT
Sbjct: 183 KDTCNKGT---QVSHPNDDPWVIHQRERRSSNTVPNPQDTDQPT 223
>SB_5913| Best HMM Match : RVT_1 (HMM E-Value=1.2)
Length = 628
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 27 RHSPLVSSVIEHDPRCDVHGRCSTPYRSSLYLHSRESTP--GYFRDAISP--TNGLIIRR 82
R S L + +++ D S P + S +++ES GYF+ A + + L++
Sbjct: 5 RVSKLAALLLDISDGSDSGDEDSPPQQPSNVPNTKESRTLYGYFKSASATRSASNLVLFC 64
Query: 83 RDSCKSGSPARDLEHPSTFPSILRRDRH 110
RD K GS A +HP T + R RH
Sbjct: 65 RDYNK-GSCASKADHPGTIKGVQRWVRH 91
>SB_147| Best HMM Match : LepA_C (HMM E-Value=0.73)
Length = 611
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 85 SCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRR 119
S S P+RD+E P T PS HS TP RR
Sbjct: 311 SSSSPRPSRDIELPPTSPSYTPGRVHSDPETPRRR 345
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.9 bits (64), Expect = 2.1
Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 9/136 (6%)
Query: 53 RSSLYLHSRESTPGYFRDAISPTNGLIIRRRDSCKSGSPARDLEH--------PSTFPSI 104
RSS + R S+PG + RR + G +RD + P
Sbjct: 189 RSSRQSNQRSSSPGDASPGRGGSREPKPRRNREGRQGGGSRDRDSQRRERSPVPERRQER 248
Query: 105 LRRDRHSPSVTPPRRDTPSPTQKYHS-KRHSMGSFPNLSRGNIFNYNRRESISSNGVREM 163
R+D SPSV+PPRR + S R S G + S + +RE S + R
Sbjct: 249 RRQDSSSPSVSPPRRSKGRREENSVSPPRRSKGKREDNSASAPRSRGKREENSVSPPRRS 308
Query: 164 KRDYVGSTNSLPRKHR 179
K ++ S PR+ +
Sbjct: 309 KGRREENSVSPPRRSK 324
>SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 90 SPARDLEHPSTFPSILRRDRHSPSV--TPPRRDTPSPTQKYHSKRHSMGSFPNLSRGNI 146
S ARD + + FPS+ +R + P + T + D P + + + + + NL++ ++
Sbjct: 63 SIARDSQTQTDFPSVFKRKQRKPRLKSTSSQTDYPKDSNSFDMQTQVVTNIANLAQSSV 121
>SB_58939| Best HMM Match : Motile_Sperm (HMM E-Value=3.4)
Length = 368
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 89 GSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHS 130
G R + HPS+ P R S S++ RD P+P Q HS
Sbjct: 178 GHMLRTVSHPSSAPM----PRRSTSISDLARDLPTPKQAAHS 215
>SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7)
Length = 412
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 89 GSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSP 124
G P R + P P +LR SP++ PPR P
Sbjct: 163 GGPLRMMPPPGMPPLLLRPQEFSPNIPPPRFGLTGP 198
>SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 18 GNLTLEGEGRHSPLVSSVIEHDPRCDVHGRCSTPYRSSLYLHSRESTPGYFRDAISPTNG 77
G EG +P+ + + + HG + P HS S PGY R A++ T+
Sbjct: 271 GGYASADEGPRTPITNGMSGYMSDSYAHGPRTPP-------HSVRSEPGYVRSAVATTSH 323
Query: 78 LIIRRRDSCKSGSPARDLEHPST 100
+ R K G P L T
Sbjct: 324 SLPRGPVHAKKGPPPPTLPKRGT 346
>SB_22024| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.2)
Length = 953
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 89 GSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHS 130
G R + HPS+ P R S S++ RD P+P Q HS
Sbjct: 565 GHMLRTVSHPSSAPM----PRRSTSISDLARDLPTPKQAAHS 602
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 84 DSCKSGSPARDLEHPSTFPSILRRDRH-SPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLS 142
+S + SP P+ P +LR R + S+T R TPS T S S GS+P
Sbjct: 774 ESSPNVSPVTRRRSPNHSPKMLRTHREETDSLTRVNR-TPSATSS--SSSESSGSWPTSG 830
Query: 143 RGNIFNYNRRESISSNGVREMKRDYVGSTNSLPRKHRDLAASTNSLI 189
G++ +R++ S+ +R +R + + + R ++T+S I
Sbjct: 831 FGSL---DRKDDGST--IRTKRRQHKLPATPVEKPRRGSGSTTSSEI 872
>SB_16986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 28 HSPLVSSVIEHDPRCDVHGRCSTPYRSSLYLHSRESTPGYFRDAISPTNGLIIRRR 83
H+P +S H P H STP+ H+ ES Y R A++ G I+R+
Sbjct: 208 HTPESTS---HTPGSTPHTPGSTPHTPESTSHTPESKCDYIRRALTRKEGCTIKRQ 260
>SB_43519| Best HMM Match : Pre-SET (HMM E-Value=0.37)
Length = 829
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 91 PARDLEHPSTFPSILRRDRHSPSVTPP 117
PAR+ E P+ SIL D H+ V PP
Sbjct: 651 PAREQERPNVAISILPPDEHASLVQPP 677
>SB_25882| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 390
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 125 TQKYHSKR--HSMG-SFPNLSRGNIFNYNRRESISSNGVREMKRD 166
T K H KR +S+ SF + SR +++ RR S+S+ +R+M RD
Sbjct: 319 TSKLHDKRSFYSLRVSFTSSSR--LYSGIRRSSVSTRSIRKMSRD 361
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 84 DSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSK 131
D K G+ + E+P+TFP + + + +P R+TP ++H +
Sbjct: 73 DDFKCGTSSTP-EYPTTFPRLEQTTPRMRANSPENRETPQTKTEWHGQ 119
>SB_8212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 148 NYNRRESISSNGVREMK-RDYVGSTNSLPRKHRDLAASTNSLIRKSREHIGS 198
N RES+ S + K R+ +GS K R+ ST I K RE +GS
Sbjct: 43 NARNRESLGSARLSNAKGRESLGSARWSNAKGRESLESTRWSITKGRESLGS 94
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 109 RHSPSVTPPRRDTPSPTQKYHSKRHSMGSFPNLSRG 144
RH P V+PP + SP + ++HS P + +G
Sbjct: 144 RHVPIVSPPLEEPVSPPLPWAYRKHSPSVSPPIYKG 179
>SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 82 RRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRRDTPSPTQKYHSKRHSM--GSFP 139
R +S + + L + + S+ RH+ R ++ T +++S ++ S P
Sbjct: 46 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLP 105
Query: 140 NLSRGNIFNYNRRESISSNGVREMKRDYVGSTNSLPR--KHRDLAAST 185
N +R N + R + +N R + NSLP +H L +T
Sbjct: 106 NTTRHNSLHNTTRHNSLTNTTRHNSLNNTTRHNSLPNTTRHNSLPNTT 153
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 27.9 bits (59), Expect = 8.5
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 23 EGEGRHSPLVSSVIEHDPRC---DVHGRCSTP-YRSSLYLHSRESTPGYFRDAISPTNGL 78
E E + SP+ + +PR D R +P + SR +P R + SP
Sbjct: 185 EEEHKESPVHHRSLSPEPRRGYRDQRRRSHSPAHHRRSRSRSRSRSPRRRRRSRSP---- 240
Query: 79 IIRRRDSCKSGSPARDLEHPSTFPSILRRDRHSPSVTPPRR----DTPSPTQKYHSKR 132
RRR +S SP H S S R RHS S +P R + SP +K H K+
Sbjct: 241 --RRRRRSRSPSP-HHRSHRSRSRSRSPRRRHSRSRSPTHRRHRSRSHSPEKKKHKKK 295
>SB_8320| Best HMM Match : p450 (HMM E-Value=0)
Length = 1207
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 129 HSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMKR 165
H + ++G+FP R + YN +S + NG R + R
Sbjct: 361 HIRTLTLGTFPTTMRVSCTIYNSAKSFTRNGARSIVR 397
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,447,548
Number of Sequences: 59808
Number of extensions: 420416
Number of successful extensions: 1424
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1380
Number of HSP's gapped (non-prelim): 58
length of query: 254
length of database: 16,821,457
effective HSP length: 81
effective length of query: 173
effective length of database: 11,977,009
effective search space: 2072022557
effective search space used: 2072022557
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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