GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000631-TA|BGIBMGA000631-PA|undefined
         (254 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.6  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    25   2.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 122 PSPTQKYHSKRHSMGSFPNLSRGNIFNYNRRESISSNGVREMKRDYV-GSTNSL 174
           P  +Q+ HS        P     N+FN+NR    + N   + +RD + GS   L
Sbjct: 192 PHHSQQQHSASPRCYPMPPEHMYNMFNFNRNGREARNRAEKNRRDKLNGSIQEL 245


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 42  CDVHGRCSTPYRSSLYLHSRESTPGYFRDAISPTNGLIIRRRDSCKSGSPARDLEHPSTF 101
           CDV   CS  Y +     S     GY    I+  + + +    +  S  PAR     S +
Sbjct: 241 CDV---CSEVYNTHRDCLSGIGVDGYTSGIIAEASRIALTNLATALSALPARSYAQRSPY 297

Query: 102 PSILR 106
           PS  R
Sbjct: 298 PSFHR 302


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,957
Number of Sequences: 2123
Number of extensions: 11862
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 2
length of query: 254
length of database: 516,269
effective HSP length: 63
effective length of query: 191
effective length of database: 382,520
effective search space: 73061320
effective search space used: 73061320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)