Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000630-TA|BGIBMGA000630-PA|IPR006595|CTLH, C-terminal to
LisH motif
(551 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DA1FCE Cluster: PREDICTED: similar to WD repeat ... 320 5e-86
UniRef50_O94967 Cluster: WD repeat-containing protein 47; n=41; ... 318 3e-85
UniRef50_Q4SFF2 Cluster: Chromosome 1 SCAF14603, whole genome sh... 296 8e-79
UniRef50_A7RYU0 Cluster: Predicted protein; n=1; Nematostella ve... 194 5e-48
UniRef50_A0DRT5 Cluster: Chromosome undetermined scaffold_60, wh... 71 6e-11
UniRef50_UPI00006CB067 Cluster: hypothetical protein TTHERM_0024... 61 9e-08
UniRef50_Q550I6 Cluster: Putative uncharacterized protein; n=2; ... 55 4e-06
UniRef50_A0CG36 Cluster: Chromosome undetermined scaffold_178, w... 43 0.018
UniRef50_Q54Y96 Cluster: Putative uncharacterized protein; n=1; ... 40 0.17
UniRef50_Q2TAY7 Cluster: Smu-1 suppressor of mec-8 and unc-52 pr... 40 0.17
UniRef50_Q4N9B2 Cluster: Putative uncharacterized protein; n=2; ... 38 0.69
UniRef50_A7P628 Cluster: Chromosome chr4 scaffold_6, whole genom... 38 0.91
UniRef50_UPI00006CAFF3 Cluster: hypothetical protein TTHERM_0023... 37 1.2
UniRef50_UPI00006CF201 Cluster: hypothetical protein TTHERM_0054... 36 2.1
UniRef50_Q88WQ3 Cluster: 5-formyltetrahydrofolate cyclo-ligase; ... 36 2.8
UniRef50_Q019Y2 Cluster: WD-40 repeat protein; n=5; Viridiplanta... 36 2.8
UniRef50_Q9XW36 Cluster: Putative uncharacterized protein aqp-3;... 36 2.8
UniRef50_Q6CD60 Cluster: Similar to tr|Q9UT85 Schizosaccharomyce... 36 2.8
UniRef50_Q5CUF2 Cluster: WD-40 repeat protein, SMART LisH domain... 36 3.7
UniRef50_Q5ABD9 Cluster: Vacuolar protein sorting-associated pro... 36 3.7
UniRef50_Q9UT85 Cluster: Heterotrimeric G protein beta subunit G... 35 4.9
UniRef50_Q9FNN2 Cluster: WD-repeat protein-like; n=7; Magnolioph... 35 6.4
UniRef50_A5DSL0 Cluster: Putative uncharacterized protein; n=1; ... 35 6.4
UniRef50_Q5U2M8 Cluster: Mediator of DNA damage checkpoint prote... 35 6.4
UniRef50_UPI0000E484FF Cluster: PREDICTED: similar to SMC6 prote... 34 8.5
UniRef50_Q8YG36 Cluster: LPSA PROTEIN; n=6; Brucella|Rep: LPSA P... 34 8.5
UniRef50_Q7F7Z6 Cluster: Putative uncharacterized protein; n=1; ... 34 8.5
>UniRef50_UPI0000DA1FCE Cluster: PREDICTED: similar to WD repeat
domain 47; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to WD repeat domain 47 - Rattus norvegicus
Length = 922
Score = 320 bits (787), Expect = 5e-86
Identities = 172/420 (40%), Positives = 252/420 (60%), Gaps = 23/420 (5%)
Query: 6 LNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLE 65
+N++E ++++L L+FL+++ LHI+ L+LE+E+GVING ++DD+LFLRQLILDGQWD+VL+
Sbjct: 7 VNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQ 66
Query: 66 FIQPLSALKTFEANKFNYAILRHKYIELLCIRSEIKAYXXXXXXXXXXXXXXXXXXXI-- 123
FIQPL ++ F+ +F Y IL+ K++E LC+ + + A +
Sbjct: 67 FIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEE 126
Query: 124 -APSKEEYSNLCLLLTLPSITDHAQFKKWNPSNARVQCFREVYPLVEQFLPCDKKSSSGT 182
PSK++YS LCLLLTLP +T+HA+FK WNPS ARV CF EV +V +F+P D+K S
Sbjct: 127 YCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEVCVMVAEFIPADRKLSEAG 186
Query: 183 ISKCAKNDRLMQLLIKGILYESCVNYCQAKATGSKEAQSNDVTFSRLLDGSGFDESDLSL 242
A N+RL QL++KG+LYE CV +CQ+KATG + +S + LL G+G D+ DLSL
Sbjct: 187 FK--ASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDLDLSL 244
Query: 243 LSWLQSIPAETFSVPFEQRMLNVDVEKLERPSLHTSWTEHMLVTPIKPRTFPHLAMPFRR 302
LSWLQ++P+ FS FEQ+MLN+ V+KL +P+ ++ + L+TP+ + P+ + P RR
Sbjct: 245 LSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPT-KAAYAD--LLTPLISKLSPYPSSPMRR 301
Query: 303 PRSAADAMTRSLRPLPD----GAPRHPALMALSAIDYGPSSSCFAGFHLTGIKGSKLMNT 358
P+SA MTRSL P D G H ++ P S FA FH G++ N
Sbjct: 302 PQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQ-----NL 356
Query: 359 SVDRLFDSPTGDGIFEDLNDTLKPIAEQVKLSEDSPPAKLNEGSSI-GASNATTPEHRAQ 417
S L ++ I+E+ P + P LN + + G + EHR Q
Sbjct: 357 SRSLLLENTECHSIYEE-----SPERSDTPVETQQPGEHLNPCARVRGXRKSLQMEHRTQ 411
>UniRef50_O94967 Cluster: WD repeat-containing protein 47; n=41;
Euteleostomi|Rep: WD repeat-containing protein 47 - Homo
sapiens (Human)
Length = 919
Score = 318 bits (780), Expect = 3e-85
Identities = 168/401 (41%), Positives = 245/401 (61%), Gaps = 17/401 (4%)
Query: 6 LNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLE 65
+N++E ++++L L+FL+++ LHI+ L+LE+E+GVING ++DD+LFLRQLILDGQWD+VL+
Sbjct: 7 VNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQ 66
Query: 66 FIQPLSALKTFEANKFNYAILRHKYIELLCIRSEIKAYXXXXXXXXXXXXXXXXXXXI-- 123
FIQPL ++ F+ +F Y IL+ K++E LC+ + + A +
Sbjct: 67 FIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEE 126
Query: 124 -APSKEEYSNLCLLLTLPSITDHAQFKKWNPSNARVQCFREVYPLVEQFLPCDKKSSSGT 182
PSK++YS LCLLLTLP +T+HA+FK WNPS ARV CF E +V +F+P D+K S
Sbjct: 127 YCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADRKLSEAG 186
Query: 183 ISKCAKNDRLMQLLIKGILYESCVNYCQAKATGSKEAQSNDVTFSRLLDGSGFDESDLSL 242
A N+RL QL++KG+LYE CV +CQ+KATG + +S + LL G+G D+ DLSL
Sbjct: 187 FK--ASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDLDLSL 244
Query: 243 LSWLQSIPAETFSVPFEQRMLNVDVEKLERPSLHTSWTEHMLVTPIKPRTFPHLAMPFRR 302
LSWLQ++P+ FS FEQ+MLN+ V+KL +P+ ++ + L+TP+ + P+ + P RR
Sbjct: 245 LSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPT-KAAYAD--LLTPLISKLSPYPSSPMRR 301
Query: 303 PRSAADAMTRSLRPLPD----GAPRHPALMALSAIDYGPSSSCFAGFHLTGI----KGSK 354
P+SA MTRSL P D G H ++ P S FA FH G+ +
Sbjct: 302 PQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSLM 361
Query: 355 LMNTSVDRLF-DSPTGDGIFEDLNDTLKPIAEQVKLSEDSP 394
L NT ++ +SP D + I Q +SE P
Sbjct: 362 LENTECHSIYEESPERDTPVDAQRPIGSEILGQSSVSEKEP 402
>UniRef50_Q4SFF2 Cluster: Chromosome 1 SCAF14603, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 1
SCAF14603, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 961
Score = 296 bits (727), Expect = 8e-79
Identities = 146/318 (45%), Positives = 209/318 (65%), Gaps = 8/318 (2%)
Query: 6 LNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLE 65
++++E +V+++ L+FL++R LHI+ L+LE+E+G+ING Y+DD+LFLRQLILDG+WD+V++
Sbjct: 7 ISIKEAEVIKVVLDFLNSRKLHISMLALEKESGIINGLYSDDMLFLRQLILDGEWDEVMQ 66
Query: 66 FIQPLSALKTFEANKFNYAILRHKYIELLCIRSEIKAYXXXXXXXXXXXXXXXXXXXI-- 123
FIQPL ++ FE +F+Y IL+ K++E LC+ + + A +
Sbjct: 67 FIQPLEGMEKFEKKRFHYIILKQKFLEALCVNNAMSAAEDPQNLELSMQEAVKCLHGLEE 126
Query: 124 -APSKEEYSNLCLLLTLPSITDHAQFKKWNPSNARVQCFREVYPLVEQFLPCDKKSSSGT 182
PSKE+YS LCLLLTLP ++ HA+FK WNPS ARV CF E +V +F+P D+K S
Sbjct: 127 FCPSKEDYSKLCLLLTLPRLSHHAEFKDWNPSTARVHCFEEACSMVAEFIPADRKLSEAG 186
Query: 183 ISKCAKNDRLMQLLIKGILYESCVNYCQAKATGSKEAQSNDVTFSRLLDGSGFDESDLSL 242
A +RL QLL+KGILYE CV +CQ+KATG + +S + LL G+G DE DLSL
Sbjct: 187 FR--ASGNRLFQLLVKGILYECCVEFCQSKATGEEITESEVLLGVDLLCGNGCDELDLSL 244
Query: 243 LSWLQSIPAETFSVPFEQRMLNVDVEKLERPSLHTSWTEHMLVTPIKPRTFPHLAMPFRR 302
LSWLQ++ F+ F+Q+ L++ VE+L +PS L+TP+ R P A P++R
Sbjct: 245 LSWLQNLSLGAFTCAFQQKTLSIHVERLVKPS---KAGHADLLTPLIKRLSPCPASPYQR 301
Query: 303 PRSAADAMTRSLRPLPDG 320
P SA M+RSL P DG
Sbjct: 302 PHSADTYMSRSLNPALDG 319
>UniRef50_A7RYU0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 194 bits (473), Expect = 5e-48
Identities = 100/273 (36%), Positives = 153/273 (56%), Gaps = 4/273 (1%)
Query: 1 MPSTHLNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQW 60
M + L D+VRL L+F + LH + +LE+E+GV N + ++DVLFLRQLILDG+W
Sbjct: 1 MTKAKVALESGDIVRLILQFFNAEKLHKSMRNLEKESGVTNCDLSEDVLFLRQLILDGEW 60
Query: 61 DDVLEFIQPLSALKTFEANKFNYAILRHKYIELLCIRSEIKAYXXXXXXXXXXXXXXXXX 120
D +L F QPL A + F+ KF Y +LR K++E+L +S I+
Sbjct: 61 DAILTFAQPLEAAEGFDVRKFRYLVLRQKFMEVLYFKSGIEGVSKSYSIEDLIKCLNHLE 120
Query: 121 XXIAPSKEEYSNLCLLLTLPSITDHAQFKKWNPSNARVQCFREVYPLVEQFLPCDKKSSS 180
P K +Y+ LC LLT+P +++ +++ WNP AR+QCF EV ++ +P KK +
Sbjct: 121 KD-CPFKSDYTKLCWLLTVPDLSEQPEYQNWNPETARIQCFEEVLEILRAVMPVVKKRTV 179
Query: 181 GTISKCAKNDRLMQLLIKGILYESCVNYCQAKA-TGSKEAQSNDVTFSRLLDGSGFDESD 239
DRL L++KG+ +ESCV YCQ +A G +N S +L G+ ES
Sbjct: 180 KR-PVTPNEDRLTNLIVKGLCFESCVEYCQQRALNGDFNDDNNFTVSSNILCGTS-HEST 237
Query: 240 LSLLSWLQSIPAETFSVPFEQRMLNVDVEKLER 272
+ +SWL+S+P +++ FE L+V+ L +
Sbjct: 238 GNFISWLKSLPQDSYVSDFEPMDLDVNFHHLTK 270
>UniRef50_A0DRT5 Cluster: Chromosome undetermined scaffold_60, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_60,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 586
Score = 71.3 bits (167), Expect = 6e-11
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 13 VVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLEFIQPLSA 72
++++ L FL ++ L + L LE ET + Y ++ FLRQ ILDG + +++QP
Sbjct: 7 ILQMVLVFLRDQKLFKSLLHLELETQISIDTYTRELQFLRQQILDGNFIGAEQYLQP--- 63
Query: 73 LKTFEANKFNYAIL---RHKYIELLCIRSEIKAYXXXXXXXXXXXXXXXXXXXIAPSKEE 129
LKT ++F+Y +L + +Y EL+ + +++ S E
Sbjct: 64 LKTRLNDQFSYVLLELKKQQYFELINAKPDVEILITLLRQIEQLA-----------SPEA 112
Query: 130 YSNLCLLLTLPSITDHAQFKKWNPSNARVQCFREV 164
Y NLC LTL I DH +F W+ R+ CF +
Sbjct: 113 YKNLCYFLTLSCIRDHPEFSDWSVEKGRLDCFEGI 147
>UniRef50_UPI00006CB067 Cluster: hypothetical protein
TTHERM_00241520; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00241520 - Tetrahymena
thermophila SB210
Length = 1143
Score = 60.9 bits (141), Expect = 9e-08
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 25 DLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLEFIQPLSALKTFEANKFNYA 84
D H ++ ++T ++ Y ++ LR+LIL+G++++ +F+ P +F+ N Y
Sbjct: 2 DQHFYLINSFQKTSLVK--YPSELAILRKLILEGEFEESEQFLVPFIEKFSFKMNPAMYE 59
Query: 85 ILRHKYIELLCIRSEIKAYXXXXXXXXXXXXXXXXXXXIAPSKEEYSNLCLLLTLPSITD 144
I + ++ELL I + + SKE Y L LL++ +I +
Sbjct: 60 IKKQYFLELLEIGPDYQIMTRLLKSIQQFT-----------SKENYKRLFFLLSIENIKE 108
Query: 145 HAQFKKWNPSNARVQCFREVYPLVEQ 170
H + W+P R++CF +V +E+
Sbjct: 109 HPDYANWSPEMGRLECFEKVKNCIEE 134
>UniRef50_Q550I6 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 730
Score = 55.2 bits (127), Expect = 4e-06
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 10 EDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQL---ILDGQWDDVLEF 66
++D++R+ +++L + + L+++ E V + + ++++ IL+G W++V
Sbjct: 154 KEDIIRMIIQYLQDEGYTASLLTVQDEANVKFNEHVYKITQMKKMKKAILEGDWNEV--- 210
Query: 67 IQPLSALKTFEANK-FNYAILRHKYIELLCIRSEIKAYXXXXXXXXXXXXXXXXXXXIAP 125
+ L+A TF+ ++ F YA+ + Y+ELL + KA+
Sbjct: 211 -EKLTAKNTFKNHQSFLYAVYKQAYLELLEKQEYQKAFSYLTKRLKPLEGRQN------- 262
Query: 126 SKEEYSNLCLLLTLPSITDHAQFKKWNPSNARVQCFREVYPLVEQF---LPCDKKSSSGT 182
+ +E+ +LC LLT S+ + FK W+ S RE LVEQF L + S+G
Sbjct: 263 NADEFKDLCYLLTCRSVQELNSFKSWDGSKG---TSRE--KLVEQFQSMLELENTKSTGA 317
Query: 183 ISKCAKNDRLMQLLIKGILYE 203
+ + + RL+ L + + Y+
Sbjct: 318 LFRVPPH-RLISLFKQSVAYQ 337
>UniRef50_A0CG36 Cluster: Chromosome undetermined scaffold_178,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_178,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 483
Score = 43.2 bits (97), Expect = 0.018
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 6 LNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLE 65
+ + +DV++L L+FL +Q L++E+G+ N D L++ I+DG+WD VL
Sbjct: 1 MEINRNDVIKLILQFLQENGFKKSQEELQKESGICL-NLVDSKQNLKKDIIDGKWDQVLN 59
Query: 66 FIQ 68
I+
Sbjct: 60 QIK 62
>UniRef50_Q54Y96 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 522
Score = 39.9 bits (89), Expect = 0.17
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 3 STHLNL--REDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQW 60
+TH N+ + DV++L L+FL L + +L+ ETG IN N D + +G W
Sbjct: 7 TTHHNIEIQSQDVIKLILQFLKENSLGNSLTALQEETG-INLNAVDSKETFLNDVKNGNW 65
Query: 61 DDVLEFIQPLSALKTFEANKFNYAILRHKYI 91
D VL + L T + + KY+
Sbjct: 66 DSVLTVVSTLRLSTTLLMDLYEQEYELCKYL 96
>UniRef50_Q2TAY7 Cluster: Smu-1 suppressor of mec-8 and unc-52
protein homolog; n=49; Eukaryota|Rep: Smu-1 suppressor
of mec-8 and unc-52 protein homolog - Homo sapiens
(Human)
Length = 513
Score = 39.9 bits (89), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 6 LNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLE 65
+ + DV+RL +++L LH +L+ ET ++ N D + I G WD VL+
Sbjct: 3 IEIESSDVIRLIMQYLKENSLHRALATLQEET-TVSLNTVDSIESFVADINSGHWDTVLQ 61
Query: 66 FIQPL 70
IQ L
Sbjct: 62 AIQSL 66
>UniRef50_Q4N9B2 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 526
Score = 37.9 bits (84), Expect = 0.69
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 5 HLNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVL 64
++ + DDVV+L L++L +L T L ++ ETGV + ++ + + + G+W VL
Sbjct: 4 NIGVSSDDVVKLILQYLKENNLKKTLLMMQEETGVSLNSVSNLEVLISDAQM-GRWSQVL 62
Query: 65 EFIQPL 70
E I +
Sbjct: 63 ETIDTM 68
>UniRef50_A7P628 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1334
Score = 37.5 bits (83), Expect = 0.91
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 12 DVVRLSLEFLHNRDLHITQLSLERETGV-INGNYADDVLFLRQLILDGQWDDVLEFIQPL 70
+++ L L+FLH + T LERE+ V N Y ++++ + GQ+D+ ++
Sbjct: 260 ELIFLILQFLHEKKYTDTVHKLERESAVFFNMPYFEEMMHM------GQFDEAQHYLLAF 313
Query: 71 SALKTFE-ANKFNYAILRHKYIELLCIRSEIKA 102
+ LK + K + I + KY+E L ++KA
Sbjct: 314 TNLKANNYSRKIFFEIRKQKYLEALDKHDDVKA 346
>UniRef50_UPI00006CAFF3 Cluster: hypothetical protein
TTHERM_00237310; n=1; Tetrahymena thermophila
SB210|Rep: hypothetical protein TTHERM_00237310 -
Tetrahymena thermophila SB210
Length = 850
Score = 37.1 bits (82), Expect = 1.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 52 RQLILDGQWDDVLEFIQPLSALKTFEANKFNYAILRHKYIELL 94
+QLIL QW++ +++ + L L N+ Y I RH Y + L
Sbjct: 5 KQLILSSQWEEAIKYCENLPFLDEKSKNRCKYLIYRHSYFDSL 47
>UniRef50_UPI00006CF201 Cluster: hypothetical protein
TTHERM_00540170; n=1; Tetrahymena thermophila
SB210|Rep: hypothetical protein TTHERM_00540170 -
Tetrahymena thermophila SB210
Length = 514
Score = 36.3 bits (80), Expect = 2.1
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 6 LNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLE 65
L + +DVV+L L+F+ L + SL+ ET V ++ F+ I +G+WD VL
Sbjct: 3 LQFKTEDVVKLMLQFMKENGLVNSLKSLQEETQVSLNVVSNTEQFVEN-IKEGRWDKVLN 61
Query: 66 FIQPL 70
+Q +
Sbjct: 62 EVQSM 66
>UniRef50_Q88WQ3 Cluster: 5-formyltetrahydrofolate cyclo-ligase;
n=1; Lactobacillus plantarum|Rep:
5-formyltetrahydrofolate cyclo-ligase - Lactobacillus
plantarum
Length = 188
Score = 35.9 bits (79), Expect = 2.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 263 LNVDVEKLERPSLHTSWTEHMLVTPIKPRTFPHLAMPFRRPRSAADAMTRSLRPLPDGAP 322
++ D+E RP + +W E +V + P+T PH M F P A D + R+ +P+
Sbjct: 49 ISSDIEVATRPLIEQAWAEGKMV--VIPKTLPHRQMAF-YPYQATDRLERTSFGIPEPVT 105
Query: 323 RHP 325
P
Sbjct: 106 GEP 108
>UniRef50_Q019Y2 Cluster: WD-40 repeat protein; n=5;
Viridiplantae|Rep: WD-40 repeat protein - Ostreococcus
tauri
Length = 534
Score = 35.9 bits (79), Expect = 2.8
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 12 DVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLEFIQPLS 71
DVV++ L++ L T +L RET N DD+ R I G+WD VL + LS
Sbjct: 16 DVVKIVLQWARESGLENTAEALSRETATTL-NCVDDLETFRHDITRGRWDVVLPSLAKLS 74
Query: 72 ALKTFEANKFNYAIL 86
K + + + L
Sbjct: 75 MPKNVLEDAYEHVTL 89
>UniRef50_Q9XW36 Cluster: Putative uncharacterized protein aqp-3;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein aqp-3 - Caenorhabditis elegans
Length = 421
Score = 35.9 bits (79), Expect = 2.8
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 490 SMEQVTDAPAGFSTAAKSQQQFANRPPIEEKPREQMLY 527
S+ VTD P F+ + KS Q NRPP KP E+M+Y
Sbjct: 66 SVVAVTDTPFEFAPSQKSSQH-TNRPPPFVKPEEEMMY 102
>UniRef50_Q6CD60 Cluster: Similar to tr|Q9UT85 Schizosaccharomyces
pombe WD repeat protein; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q9UT85 Schizosaccharomyces pombe WD
repeat protein - Yarrowia lipolytica (Candida
lipolytica)
Length = 516
Score = 35.9 bits (79), Expect = 2.8
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 2 PSTHLNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWD 61
P T+ ++ RL L+ L + T +LE E+ + + V LRQ + GQWD
Sbjct: 8 PVTYRGYNTTEMTRLLLQALGDLGYKATAETLESESNI--SLESPHVAQLRQAVTSGQWD 65
Query: 62 DVLEFIQPLSALKTFEANKFNYAILRHKYIELL 94
D + ++ ++ + I + +ELL
Sbjct: 66 DAERYFDGVTLRSGTNPAEYRFLIRKQHCLELL 98
>UniRef50_Q5CUF2 Cluster: WD-40 repeat protein, SMART LisH domain;
n=3; Cryptosporidium|Rep: WD-40 repeat protein, SMART
LisH domain - Cryptosporidium parvum Iowa II
Length = 595
Score = 35.5 bits (78), Expect = 3.7
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 5 HLNLREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVL 64
H+N +V++L L+FL L + +L E+GV + N+ + V +R +I G W++++
Sbjct: 3 HVNFSNVNVLKLILQFLLESGLLESYSTLSYESGV-SLNWIESVDEIRTIISKGHWNELI 61
Query: 65 EFIQ 68
E ++
Sbjct: 62 EVLK 65
>UniRef50_Q5ABD9 Cluster: Vacuolar protein sorting-associated
protein 27; n=1; Candida albicans|Rep: Vacuolar protein
sorting-associated protein 27 - Candida albicans (Yeast)
Length = 841
Score = 35.5 bits (78), Expect = 3.7
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 462 LKEYQIQKQRECD-DYIRNLCSSESRQPKSMEQVTDAPAGFSTAAKSQQQF-ANRPPIEE 519
LKEY+ +K R+ I+ + S++S QP+S P ST+ Q QF A++PP ++
Sbjct: 382 LKEYETEKSRQSQYQQIQPVQSTQSTQPESDLYNISFPTFSSTSNYPQPQFTASQPPPQQ 441
Query: 520 KPREQ 524
+ ++Q
Sbjct: 442 QQQQQ 446
>UniRef50_Q9UT85 Cluster: Heterotrimeric G protein beta subunit
Gnr1; n=1; Schizosaccharomyces pombe|Rep:
Heterotrimeric G protein beta subunit Gnr1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 507
Score = 35.1 bits (77), Expect = 4.9
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 12 DVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQW 60
+V+ L L+FL++ + +LE+ETG++ + +DV L+Q +L G W
Sbjct: 10 EVIHLLLQFLNDYGYDESLKALEKETGLV--SETEDVKRLKQAVLQGDW 56
>UniRef50_Q9FNN2 Cluster: WD-repeat protein-like; n=7;
Magnoliophyta|Rep: WD-repeat protein-like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 589
Score = 34.7 bits (76), Expect = 6.4
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 8 LREDDVVRLSLEFLHNRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQWDDVLEFI 67
+R+ + VR+ L++ T LE E+G+ N + LFL+Q + DG+WD ++ +
Sbjct: 63 IRKSEFVRIITRALYSLGYDKTGAMLEEESGISLHN-STIKLFLQQ-VKDGKWDQSVKTL 120
Query: 68 QPLSALKTFEANKFNYAILRHKYIELL 94
+ ++ +L K++E L
Sbjct: 121 HRIGFPDEKAVKAASFLLLEQKFLEFL 147
>UniRef50_A5DSL0 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 895
Score = 34.7 bits (76), Expect = 6.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 486 RQPKSMEQVTDAPAGFSTAAKSQQQFANRPPIEEKPREQMLYGS 529
+QP +++ P G S QQQ+ PP +++ ++Q L+G+
Sbjct: 617 QQPAQPRRLSSMPGGMSNYKDYQQQYKQPPPSQQQQQQQQLFGN 660
>UniRef50_Q5U2M8 Cluster: Mediator of DNA damage checkpoint protein
1; n=4; Rattus norvegicus|Rep: Mediator of DNA damage
checkpoint protein 1 - Rattus norvegicus (Rat)
Length = 1279
Score = 34.7 bits (76), Expect = 6.4
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 3/153 (1%)
Query: 189 NDRLMQLLIKGILYESCVNYCQAKATGSKEAQSNDVTFSRLLDGSGFDESDLSLLSWLQS 248
+DR MQ + K + + SC KA+G S+ FS + + S +S L+ S QS
Sbjct: 755 DDREMQTVEKAMGHLSCQMMPDGKASGDDPEPSDHRLFSPVPEASASPQSLLTSQSQKQS 814
Query: 249 IPAETFSVPFEQRMLNVDVEKLERPSLHTSWTEHMLVTPIKPRTF-PHLAMPFRRPRSAA 307
P F P L + +P++ + M +P P+ P +P ++
Sbjct: 815 TPQPMF--PTSSSELALPETLHTKPNVRPRRSSRMTPSPHSSAALKPYTTCPTNQPAASR 872
Query: 308 DAMTRSLRPLPDGAPRHPALMALSAIDYGPSSS 340
+ + R P L+ + + PS+S
Sbjct: 873 PTSRPTRGRANRSSTRTPELIVPTGPELQPSTS 905
>UniRef50_UPI0000E484FF Cluster: PREDICTED: similar to SMC6 protein;
n=5; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to SMC6 protein - Strongylocentrotus purpuratus
Length = 1236
Score = 34.3 bits (75), Expect = 8.5
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 449 VVHATDGDFRRDLLKEYQIQKQRECDDYIRNLCSSESRQPKSMEQVTDAPAGFSTAAKSQ 508
++H+ + D + D+L+ Q +K+R+ + E R ME+ D A AA+
Sbjct: 455 LIHSEESD-KNDILQRIQDEKERDQAQFEEERLERERRVSALMEEKRDLEAQKQNAAREI 513
Query: 509 QQFAN 513
QFAN
Sbjct: 514 DQFAN 518
>UniRef50_Q8YG36 Cluster: LPSA PROTEIN; n=6; Brucella|Rep: LPSA
PROTEIN - Brucella melitensis
Length = 721
Score = 34.3 bits (75), Expect = 8.5
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 340 SCFAGFHLTGIKGSKLMNTSVDRLFDSPTGDGIFEDLNDTLK 381
S FAG H+ G NTS + L D TGD I +D + +K
Sbjct: 530 SVFAGEHILQRVGGNTANTSWELLSDLKTGDNIMQDFDKAIK 571
>UniRef50_Q7F7Z6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 300
Score = 34.3 bits (75), Expect = 8.5
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 290 PRTFPHLAMPFRRPRSAADAMTRSLRPLPDGAPRHPAL-MALSAIDYGPSSSCFAGFHLT 348
PR FP P+R P S R RP P G+P HPA+ A SAI SS+ +
Sbjct: 166 PR-FPRPLRPYRTPTSPPSP--RISRPQPLGSPPHPAIGAAASAIPRSTSSAVLPSNSIA 222
Query: 349 GIK 351
G +
Sbjct: 223 GAR 225
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,233,649
Number of Sequences: 1657284
Number of extensions: 23420240
Number of successful extensions: 58124
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 58094
Number of HSP's gapped (non-prelim): 32
length of query: 551
length of database: 575,637,011
effective HSP length: 105
effective length of query: 446
effective length of database: 401,622,191
effective search space: 179123497186
effective search space used: 179123497186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 75 (34.3 bits)
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