GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000628-TA|BGIBMGA000628-PA|IPR000615|Bestrophin
         (543 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    26   0.77 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    26   0.77 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   1.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   2.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   4.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   4.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   4.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   4.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   5.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   5.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   7.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   7.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   9.4  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 186 ELNWLIDRHIKAAYMIVDEMHEEHPELLKDQYWEEVVPKDLPY 228
           ++ W++          ++E+++     L D YW E +P  L Y
Sbjct: 312 DVPWIVSFTNSEGLYAINEIYDNALLALLDDYWNEYIPPILYY 354


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 186 ELNWLIDRHIKAAYMIVDEMHEEHPELLKDQYWEEVVPKDLPY 228
           ++ W++          ++E+++     L D YW E +P  L Y
Sbjct: 312 DVPWIVSFTNSEGLYAINEIYDNALLALLDDYWNEYIPPILYY 354


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 371 VPITLRNRPRIPTPDVTKEVMDRENRIAMGMQNMGVIMAHQGYQNEVPVLGA 422
           VP   R    IP  D T   +D E+R+A   +++G+ + H  +    P  GA
Sbjct: 169 VPEGSRTPIEIPQ-DFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPFEGA 219


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)

Query: 177 PFGEDDDDIELNWLIDRHIKAAY--------MIVDEMHEEHPELLKDQYWEEVVPKD 225
           P  +  D+  LN L+D+   + Y        +IV+EM  E PE  KD+   +V  K+
Sbjct: 402 PKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQVDHKN 458



 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 43  SERKVFEKMDGKSPMSKYWMPLVWATNIINRARKE 77
           S+ ++   +  K P S Y  P  +   I+N  R E
Sbjct: 407 SDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSE 441


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)

Query: 177 PFGEDDDDIELNWLIDRHIKAAY--------MIVDEMHEEHPELLKDQYWEEVVPKD 225
           P  +  D+  LN L+D+   + Y        +IV+EM  E PE  KD+   +V  K+
Sbjct: 294 PKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQVDHKN 350



 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 43  SERKVFEKMDGKSPMSKYWMPLVWATNIINRARKE 77
           S+ ++   +  K P S Y  P  +   I+N  R E
Sbjct: 299 SDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSE 333


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 17/69 (24%), Positives = 27/69 (39%)

Query: 347 GRKSGRGQHRQNSRHGGQKSNGSAVPITLRNRPRIPTPDVTKEVMDRENRIAMGMQNMGV 406
           GR +GRG      +HG Q  + +    T   R R  +   T+   D   R +    N+  
Sbjct: 12  GRSTGRGLKYSGQQHGPQSDSRNQQLRTGEKRKRSTSSQSTEGENDARPRASQVKLNVFS 71

Query: 407 IMAHQGYQN 415
           I+  +   N
Sbjct: 72  IIKSRAAGN 80


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 152 YFPLFTALQFCFYVGWLKVAEVLINPFGE 180
           +  L   LQ+C Y+  L+V   L+N + E
Sbjct: 189 FINLLMELQYCHYLNILRVRYQLLNEYLE 217


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 152 YFPLFTALQFCFYVGWLKVAEVLINPFGE 180
           +  L   LQ+C Y+  L+V   L+N + E
Sbjct: 189 FINLLMELQYCHYLNILRVRYQLLNEYLE 217


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 162 CFYVGWLKVAEVLINPFGEDDDDIELNWLI 191
           C + GW+ +  V + P G       L W++
Sbjct: 10  CKFGGWMGLTPVSVEPTGFSPKGYSLLWIL 39


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 487 PSTPRAERGPADGSGGSPQSPRATITELPPSD----RESNHSGTP 527
           P +P  ++   +    SPQ    ++T+L   D     ESN+  +P
Sbjct: 682 PESPTRDKSKQNEKSPSPQQRSPSVTDLSTKDGTTVPESNNGSSP 726


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 503 SPQSPRA-TITELPPSDRESNHSGTPP--DFARKPGSKRGE 540
           +P+SP     TEL  SD + + +GTPP  D ++    K  E
Sbjct: 36  APKSPENHPETELSDSDCDLDVTGTPPPLDCSKNSPEKESE 76


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 365 KSNGSAVPITLRNRPRIPTPDVTKEVMDRENRIAMGMQNMGVIMAH 410
           +   + VP   R    IP  D T   ++ E+R+A   +++G+ + H
Sbjct: 163 REEATVVPEGSRTPIEIPR-DYTASDLEEEHRLAYFREDLGINLHH 207


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 456 APGGLTPMLTTAPVNLTPMGVSQLTTIVSSAPSTP 490
           APG  TP+++ A +N     ++ +   +  A STP
Sbjct: 247 APGKRTPLISRAKINTVKQTIAVIVMYI--ACSTP 279


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 289  QRQISRMGSVRSASTAYSSGGLFGRNRHNSVVYSSP 324
            +R+ S M ++  A   Y +  +  RN  NSV  S P
Sbjct: 1481 ERRKSHMQTL-GAKNEYGNNNVVARNHRNSVASSIP 1515


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 289  QRQISRMGSVRSASTAYSSGGLFGRNRHNSVVYSSP 324
            +R+ S M ++  A   Y +  +  RN  NSV  S P
Sbjct: 1481 ERRKSHMQTL-GAKNEYGNNNVVARNHRNSVASSIP 1515


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 289  QRQISRMGSVRSASTAYSSGGLFGRNRHNSVVYSSP 324
            +R+ S M ++  A   Y +  +  RN  NSV  S P
Sbjct: 1481 ERRKSHMQTL-GAKNEYGNNNVVARNHRNSVASSIP 1515


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 289  QRQISRMGSVRSASTAYSSGGLFGRNRHNSVVYSSP 324
            +R+ S M ++  A   Y +  +  RN  NSV  S P
Sbjct: 1481 ERRKSHMQTL-GAKNEYGNNNVVARNHRNSVASSIP 1515


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 455 LAPGGLTPMLTTAPVNLTPM 474
           LAPG + P+LT+A  + +P+
Sbjct: 415 LAPGLVGPLLTSALASWSPL 434


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,254
Number of Sequences: 317
Number of extensions: 5897
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 20
length of query: 543
length of database: 114,650
effective HSP length: 60
effective length of query: 483
effective length of database: 95,630
effective search space: 46189290
effective search space used: 46189290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)