GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000627-TA|BGIBMGA000627-PA|IPR000449|Ubiquitin-
associated/Translation elongation factor EF1B, N-terminal,
IPR000608|Ubiquitin-conjugating enzyme, E2, IPR009060|UBA-like
         (199 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.6  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   6.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.3  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   8.3  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    23   8.3  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 68   FNPPKIRFLTKIWHPNVSSVTGAICLD-ILKDQWAAALTLRTVLLS 112
            F+P  + F   ++ P+ + V   +C + +LK    +    R  LLS
Sbjct: 1471 FSPLNLNFRANVYTPDTAEVRATLCNNGLLKQNLYSPTGKRVALLS 1516


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
          coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 35 NWTELKGEIAGPVDTPYEGGT 55
          N+T   G+I  P+   Y+GGT
Sbjct: 43 NFTRPAGDIMEPIYYDYDGGT 63


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 120 GEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVH 160
           G P+ P     A     +    TM++ H +  + GG N+ H
Sbjct: 628 GHPSIPTSLAAAAAAYSHSIASTMSSYHSSMAHIGGLNLSH 668


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 133 QFRENPRLFTMTARHWTNVYA 153
           +FR NP L TM  ++  N+ A
Sbjct: 834 EFRLNPNLLTMVIKNLDNLLA 854


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 36  WTELKGEIAGPVDTPYEGG 54
           W +++G    PV+ P+ GG
Sbjct: 196 WPKVRGVAMNPVEHPHGGG 214


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,724
Number of Sequences: 2123
Number of extensions: 7942
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 5
length of query: 199
length of database: 516,269
effective HSP length: 61
effective length of query: 138
effective length of database: 386,766
effective search space: 53373708
effective search space used: 53373708
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)