Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000627-TA|BGIBMGA000627-PA|IPR000449|Ubiquitin-
associated/Translation elongation factor EF1B, N-terminal,
IPR000608|Ubiquitin-conjugating enzyme, E2, IPR009060|UBA-like
(199 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 198 2e-51
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 140 6e-34
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 138 2e-33
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 138 2e-33
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 136 1e-32
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 136 1e-32
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 136 1e-32
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 135 2e-32
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 135 2e-32
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 135 2e-32
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 134 4e-32
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 134 4e-32
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 133 9e-32
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 129 1e-30
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 129 1e-30
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 128 2e-30
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 119 1e-27
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 116 1e-26
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 114 3e-26
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 105 2e-23
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 104 5e-23
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 103 8e-23
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 103 1e-22
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 103 1e-22
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 103 1e-22
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 99 1e-21
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 100 1e-21
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 99 2e-21
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 94 5e-20
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 91 4e-19
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 91 4e-19
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 88 4e-18
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 87 1e-17
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 86 1e-17
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 81 7e-16
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 79 3e-15
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 72 2e-13
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 72 2e-13
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 65 3e-11
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 65 3e-11
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 64 8e-11
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 62 2e-10
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 60 1e-09
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 53 1e-07
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 48 4e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 47 7e-06
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 46 2e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 46 2e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 44 9e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 43 1e-04
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 43 2e-04
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 41 5e-04
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 39 0.002
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 39 0.003
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 39 0.003
At3g58460.1 68416.m06516 rhomboid family protein / ubiquitin-ass... 29 2.1
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 29 2.8
At5g58320.1 68418.m07300 kinase interacting protein-related low ... 29 2.8
At3g20630.1 68416.m02610 ubiquitin-specific protease 14, putativ... 29 2.8
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 28 4.9
At4g34370.1 68417.m04883 IBR domain-containing protein similar t... 28 4.9
At4g15475.1 68417.m02365 F-box family protein (FBL4) 99.7% ident... 27 8.5
At3g62360.1 68416.m07005 expressed protein 27 8.5
At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protei... 27 8.5
At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protei... 27 8.5
At2g16090.1 68415.m01845 zinc finger protein-related contains si... 27 8.5
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 198 bits (484), Expect = 2e-51
Identities = 94/190 (49%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 8 RIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYP 67
RI++E ++ ++++ G I++ ++N T L G I GP+ TPYEGGTF ++I +P+ YP
Sbjct: 6 RIQKELQDCERNQDSSG--IRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYP 63
Query: 68 FNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQD 127
F PPK++F TK+WHPN+SS +GAICLDILKDQW+ ALTL+T L+S+QALLSA EP DPQD
Sbjct: 64 FEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQD 123
Query: 128 AVVAKQFRENPRLFTMTARHWTNVYAGGPNIVHECNSKVQRMLDMGIDEHQARVALSSYD 187
AVVA+Q+ +N ++F TAR+WT +A ++ KV+R+++MG + Q R A+ S
Sbjct: 124 AVVAEQYMKNYQVFVSTARYWTETFAKKSSL----EEKVKRLVEMGFGDAQVRSAIESSG 179
Query: 188 WDLERATEQL 197
D A E+L
Sbjct: 180 GDENLALEKL 189
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 140 bits (339), Expect = 6e-34
Identities = 72/149 (48%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Query: 7 KRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETY 66
+RI +E + ++ SE G I EN I GP +PYEGG F LE+ +PE Y
Sbjct: 8 RRIIKETQRLL-SEPAPG--ISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 64
Query: 67 PFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQ 126
P PK+RFLTKI+HPN+ + G ICLDILKD+W+ AL +RTVLLS+QALLSA P+DP
Sbjct: 65 PMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
Query: 127 DAVVAKQFRENPRLFTMTARHWTNVYAGG 155
+AK ++ N TA+ WT +YA G
Sbjct: 124 SENIAKHWKSNEAEAVETAKEWTRLYASG 152
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 138 bits (335), Expect = 2e-33
Identities = 71/149 (47%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Query: 7 KRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETY 66
+RI +E + ++ SE G I +N I GP +PYEGG F LE+ +PE Y
Sbjct: 8 RRIIKETQRLL-SEPAPG--ISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 64
Query: 67 PFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQ 126
P PK+RFLTKI+HPN+ + G ICLDILKD+W+ AL +RTVLLS+QALLSA P+DP
Sbjct: 65 PMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
Query: 127 DAVVAKQFRENPRLFTMTARHWTNVYAGG 155
+AK ++ N TA+ WT +YA G
Sbjct: 124 SENIAKHWKSNEAEAVDTAKEWTRLYASG 152
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 138 bits (334), Expect = 2e-33
Identities = 63/113 (55%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
Query: 43 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAA 102
I GP +PYEGG F LE+ +PE YP PK+RFLTKI+HPN+ + G ICLDILKD+W+
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSP 66
Query: 103 ALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
AL +RTVLLS+QALLSA P+DP +AK ++ N TA+ WT +YA G
Sbjct: 67 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 119
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 136 bits (328), Expect = 1e-32
Identities = 67/152 (44%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP D+PY GG FL+ I P
Sbjct: 31 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFP 87
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 88 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 146
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR WT YA G
Sbjct: 147 DPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 178
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 136 bits (328), Expect = 1e-32
Identities = 67/152 (44%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP D+PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR WT YA G
Sbjct: 117 DPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 136 bits (328), Expect = 1e-32
Identities = 68/152 (44%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP D+PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPNV+S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR WT YA G
Sbjct: 117 DPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 135 bits (327), Expect = 2e-32
Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR+WT YA G
Sbjct: 117 DPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 135 bits (327), Expect = 2e-32
Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR+WT YA G
Sbjct: 117 DPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 135 bits (326), Expect = 2e-32
Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 3/152 (1%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K I G V E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT--SCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFP 58
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 59 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 117
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR+WT YA G
Sbjct: 118 DPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 149
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 134 bits (324), Expect = 4e-32
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR WT YA G
Sbjct: 117 DPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 134 bits (324), Expect = 4e-32
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR WT YA G
Sbjct: 117 DPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 133 bits (321), Expect = 9e-32
Identities = 65/152 (42%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K + G V E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPP---SNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TAR WT YA G
Sbjct: 117 DPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 129 bits (312), Expect = 1e-30
Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E +++ + V S G ++ + + I GP D+P+ GG FL+ I P
Sbjct: 1 MASKRINKELRDLQRDPPV---SCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVYHPNINS-NGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TA+ WT YA G
Sbjct: 117 DPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 129 bits (312), Expect = 1e-30
Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E +++ + V S G ++ + + I GP D+P+ GG FL+ I P
Sbjct: 1 MASKRINKELRDLQRDPPV---SCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVAFRTKVYHPNINS-NGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
DP +A ++ + + TA+ WT YA G
Sbjct: 117 DPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 128 bits (309), Expect = 2e-30
Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A +RI +E KE+ + V S G E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MATRRILKELKELQRDPPV---SCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 123
YPF PPK+ F TK++HPN++S G ICLDILKDQW+ ALT+ VLLS+ +LL+ P+
Sbjct: 58 PDYPFKPPKVVFRTKVFHPNINS-NGNICLDILKDQWSPALTISKVLLSICSLLTDPNPD 116
Query: 124 DPQDAVVAKQFRENPRLFTMTARHWTNVYA 153
DP +A ++ + + AR WT YA
Sbjct: 117 DPLVPEIAHIYKTDKTKYEAMARSWTQKYA 146
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 119 bits (287), Expect = 1e-27
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLV-NENWTELKGEIAGPVDTPYEGGTFLLEIKV 62
+A+KRI RE +++ + + G V E+ + I GP D+PY GG F + I
Sbjct: 1 MASKRISRELRDMQRHPPA---NCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDF 57
Query: 63 PETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEP 122
YPF PPK+ F TK++HPN+ S G+ICLDILK+QW+ A T VLLS+ +LL+ P
Sbjct: 58 SSDYPFKPPKVNFKTKVYHPNIDS-KGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNP 116
Query: 123 NDPQDAVVAKQFRENPRLFTMTARHWTNVYAGG 155
NDP +A ++ + + TA+ WT YA G
Sbjct: 117 NDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 116 bits (278), Expect = 1e-26
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 8 RIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYP 67
R+ +E+KE+ + E+V I+L + N + I GP +TPYEGG F L VPE YP
Sbjct: 7 RLFKEYKEVQR-EKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYP 65
Query: 68 FNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQD 127
PP++RFLTKI+HPNV TG ICLDILK+ W+ A TL++V ++ AL++ EP+ P +
Sbjct: 66 LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
Query: 128 AVVAKQFRE-NPRLFTMTARHWTNVYA 153
R + R F A+ +T + A
Sbjct: 126 CDSGNLLRSGDVRGFNSMAQMYTRLAA 152
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 114 bits (275), Expect = 3e-26
Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
Query: 5 AAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPE 64
AA+RI E++ ++ E + +G + N E I GP TPYEGG F L IK P
Sbjct: 9 AAQRIAMEYRAMISKESLFS----IGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPT 64
Query: 65 TYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPND 124
YPF PPK F T I+HPN++ G+IC++ILKD+W AL + VLLS+ LL P+D
Sbjct: 65 DYPFKPPKFTFKTPIYHPNIND-EGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDD 123
Query: 125 PQDAVVAKQFRENPRLFTMTARHWTNVYA 153
P + + F+ N F AR +T +A
Sbjct: 124 PLVPEIGQLFKNNRFQFDQRAREFTARHA 152
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 105 bits (253), Expect = 2e-23
Identities = 51/111 (45%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Query: 4 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 63
+A+KRI +E K++ K S G V E+ + I GP ++PY GG FL+ I P
Sbjct: 1 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFP 57
Query: 64 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQ 114
YPF PPK+ F TK++HPN++S G+ICLDILK+QW+ ALT+ V L Q
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVTLIFQ 107
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 104 bits (249), Expect = 5e-23
Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 1 MANIAAKRIKREFKEIMKSEEV-IGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLE 59
M+ A KR+ R+FK + + I G+ + + N I GP DTP++GGTF L
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQ----DNNIMLWNAVIFGPDDTPWDGGTFKLS 56
Query: 60 IKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
++ E YP PP +RF+++++HPN+ + G+ICLDIL++QW+ + +L S+Q+LL
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCD 115
Query: 120 GEPNDPQDAVVAKQFRENPRLFTMTAR 146
PN P ++ A+ F E+ R + R
Sbjct: 116 PNPNSPANSEAARMFSESKREYNRRVR 142
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 103 bits (247), Expect = 8e-23
Identities = 56/140 (40%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
Query: 1 MANIAAKRIKREFKEIMKSEEV-IGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLE 59
M A KR+ +FK + K V I G+ + + +W L I GP DTP++GGTF L
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIM-HWNAL---IFGPEDTPWDGGTFKLT 56
Query: 60 IKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
+ E YP PP +RF+++++HPN+ + G+ICLDIL++QW+ + VL S+Q+LL
Sbjct: 57 LHFTEDYPNKPPIVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAVLTSIQSLLCD 115
Query: 120 GEPNDPQDAVVAKQFRENPR 139
P+ P +A A+ F EN R
Sbjct: 116 PNPDSPANAEAARLFSENKR 135
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 103 bits (246), Expect = 1e-22
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 11 REFKEIMKSEEVIGGSIKLGLVN-ENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFN 69
R +KE + ++V+ ++ L + EN + + GPV PYE G F + + +P YP+
Sbjct: 33 RLWKEFQEKDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYE 92
Query: 70 PPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDP--QD 127
PPKI F TKI+HPN+S + G I +DIL +W++ALT+ VLLS+ ++LS P +P
Sbjct: 93 PPKITFKTKIFHPNISEI-GEIFVDILGSRWSSALTINLVLLSICSILS--NPVEPLLVS 149
Query: 128 AVVAKQFRENPRLFTMTARHWTNVYAGG 155
A+ ++++ + + AR WT YA G
Sbjct: 150 NHAARLYQKDRKAYEKVAREWTLKYAKG 177
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 103 bits (246), Expect = 1e-22
Identities = 52/147 (35%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 1 MANIAAKRIKREFKEIMKSEEV-IGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLE 59
M+ A KR+ R+FK + + I G+ + + N I GP DTP++GGTF L
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQ----DNNIMLWNAVIFGPDDTPWDGGTFKLS 56
Query: 60 IKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
++ E YP PP +RF+++++HPN+ + G+ICLDIL++QW+ + +L S+Q+LL
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCD 115
Query: 120 GEPNDPQDAVVAKQFRENPRLFTMTAR 146
PN P ++ A+ + E+ R + R
Sbjct: 116 PNPNSPANSEAARMYSESKREYNRRVR 142
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 103 bits (246), Expect = 1e-22
Identities = 52/147 (35%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 1 MANIAAKRIKREFKEIMKSEEV-IGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLE 59
M+ A KR+ R+FK + + I G+ + + N I GP DTP++GGTF L
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQ----DNNIMLWNAVIFGPDDTPWDGGTFKLS 56
Query: 60 IKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
++ E YP PP +RF+++++HPN+ + G+ICLDIL++QW+ + +L S+Q+LL
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCD 115
Query: 120 GEPNDPQDAVVAKQFRENPRLFTMTAR 146
PN P ++ A+ + E+ R + R
Sbjct: 116 PNPNSPANSEAARMYSESKREYNRRVR 142
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 99 bits (238), Expect = 1e-21
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 36 WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDI 95
++ + +I GP DT Y G F L+I++PE YPF PP + F T I+HPN+ + +G ICLDI
Sbjct: 44 FSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDN-SGRICLDI 102
Query: 96 L----KDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNV 151
L K W +L + TVL S++ LLS P+D V+++++ N + F AR T
Sbjct: 103 LNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEK 162
Query: 152 YA 153
YA
Sbjct: 163 YA 164
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 99.5 bits (237), Expect = 1e-21
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 5/196 (2%)
Query: 3 NIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKV 62
N+ IK+ KE+ +E IK+ + +E+++++ +I GPV TPYE G F +++ +
Sbjct: 6 NLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLAL 65
Query: 63 PETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEP 122
+P +PPK F+TKI+HPNV+S G IC++ LK W +L LR VL ++ LL P
Sbjct: 66 SHDFPHSPPKGYFMTKIFHPNVAS-NGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFP 124
Query: 123 NDPQDAVVAKQFRENPRLFTMTARHWTNVYA-GGPNIVHECNSKVQRMLDMGIDEHQ--- 178
+ K EN + AR +T ++A P S+ L++G ++
Sbjct: 125 ESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVGQTNNETPG 184
Query: 179 ARVALSSYDWDLERAT 194
A A+ S D++R T
Sbjct: 185 AATAIPSSMTDIKRVT 200
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 98.7 bits (235), Expect = 2e-21
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 7 KRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETY 66
+RI +E + ++ SE G I +N I GP +PYEGG F LE+ +PE Y
Sbjct: 8 RRIIKETQRLL-SEPAPG--ISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 64
Query: 67 PFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLL 111
P PK+RFLTKI+HPN+ + G ICLDILKD+W+ AL +RTVLL
Sbjct: 65 PMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLL 108
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 94.3 bits (224), Expect = 5e-20
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 5 AAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPE 64
+ KRI+RE E+ G +N I GP TPYEGG F L+I P
Sbjct: 37 SGKRIQREMAELNIDPPP---DCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPS 93
Query: 65 TYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPND 124
YPF PPK+ F T+I+H NV + G + ++IL+D W+ ALT+ VL +++++ EP
Sbjct: 94 DYPFKPPKLVFKTRIYHCNVDT-AGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYS 152
Query: 125 PQDAVVAKQFRENPRLFTMTARHWTNVYA 153
P V+A+ + + A+ WT +A
Sbjct: 153 PALPVIARLYLTDREKHDEVAKEWTLRFA 181
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 10 KREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFN 69
KR ++MK ++ K+ ++N+ E E +GP D+ YEGG + + +++P+ YP+
Sbjct: 6 KRREMDLMK---LMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYK 62
Query: 70 PPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLS-LQALLSAGEPNDPQDA 128
P + F+TKI+HPNV ++G++CLD++ W+ L V + L LL P+DP +
Sbjct: 63 SPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNG 122
Query: 129 VVAKQFRENPRLFTMTARHWTNVYA 153
A + + + + YA
Sbjct: 123 EAAALMMRDRPTYEQRVKEYCEKYA 147
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 91.5 bits (217), Expect = 4e-19
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 40 KGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQ 99
KG I G DT +EG + L + YPF PPK++F T +HPNV V G ICLDIL+D+
Sbjct: 68 KGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNV-DVYGNICLDILQDK 126
Query: 100 WAAALTLRTVLLSLQALLSAGEPN 123
W++A +RT+LLS+Q+LL GEPN
Sbjct: 127 WSSAYDVRTILLSIQSLL--GEPN 148
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 87.8 bits (208), Expect = 4e-18
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 10 KREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFN 69
KR ++MK ++ K+ +N+ E E GP D+ Y+GG + + +++P+ YP+
Sbjct: 6 KRREMDMMK---LMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYK 62
Query: 70 PPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLS-LQALLSAGEPNDPQDA 128
P + F+TKI+HPNV ++G++CLD++ W+ L V + L LL P+DP +
Sbjct: 63 SPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNG 122
Query: 129 VVAKQFRENPRLFTMTARHWTNVYA 153
A + + + + YA
Sbjct: 123 EAAALMMRDRPAYEQRVKEYCEKYA 147
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 86.6 bits (205), Expect = 1e-17
Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 40 KGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQ 99
KG I G DT +EG + L + YPF PK++F T +HPNV + G ICLDIL+D+
Sbjct: 69 KGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNV-DLYGNICLDILQDK 127
Query: 100 WAAALTLRTVLLSLQALLSAGEPN 123
W++A +RT+LLS+Q+LL GEPN
Sbjct: 128 WSSAYDVRTILLSIQSLL--GEPN 149
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 86.2 bits (204), Expect = 1e-17
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 10 KREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFN 69
KR ++MK ++ K+ VN++ GP D+ Y+GG + +++++PE YP+
Sbjct: 6 KRREMDMMK---LMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYK 62
Query: 70 PPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLS-LQALLSAGEPNDPQDA 128
P + F+ KI+HPNV +GA+CLD++ W+ L V S L LL P+DP +
Sbjct: 63 SPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNG 122
Query: 129 VVAKQFRENPRLFTMTARHWTNVYAGGPNIVHE 161
A + + + + + YA I+ +
Sbjct: 123 EAASLLMRDRAAYELKVKEYCEKYAKPEEILSD 155
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 80.6 bits (190), Expect = 7e-16
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 18/149 (12%)
Query: 3 NIAAKRIKREFKEIMKSEEVIGGSIKLGLVNE-NWTELKGEIAGPVDTPYEGGTFLLEIK 61
N A+ ++++ K++ K + V G S GLV+E N + I GP DT YEGG F +
Sbjct: 4 NQASLLLQKQLKDLCK-KPVDGFSA--GLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMS 60
Query: 62 VPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-------------KDQWAAALTLRT 108
PE YP +PP + F +++WHPNV S G +C+ IL ++W T+ +
Sbjct: 61 FPENYPVSPPTVTFTSEMWHPNVYS-DGKVCISILHPPGDDPHGYELASERWTPVHTVES 119
Query: 109 VLLSLQALLSAGEPNDPQDAVVAKQFREN 137
++LS+ ++LS P + AK++R+N
Sbjct: 120 IVLSIISMLSGPNDESPANVEAAKEWRDN 148
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 78.6 bits (185), Expect = 3e-15
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 18/150 (12%)
Query: 1 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNE-NWTELKGEIAGPVDTPYEGGTFLLE 59
M + A ++++ K++ K V G S GLV+E N E I GP DT YEGG F
Sbjct: 1 MNSQACLLLQKQLKDLCK-HPVDGFSA--GLVDEKNIFEWSVTIIGPPDTLYEGGFFYAI 57
Query: 60 IKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-------------KDQWAAALTL 106
+ P+ YP +PP +RF + IWHPNV G +C+ IL ++W T+
Sbjct: 58 MSFPQNYPNSPPTVRFTSDIWHPNVYP-DGRVCISILHPPGDDPSGYELASERWTPVHTV 116
Query: 107 RTVLLSLQALLSAGEPNDPQDAVVAKQFRE 136
+++LS+ ++LS P + AK++RE
Sbjct: 117 ESIMLSIISMLSGPNDESPANVEAAKEWRE 146
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 72.1 bits (169), Expect = 2e-13
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 14/107 (13%)
Query: 43 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL------ 96
I GP DT YEGG F + P+ YP +PP +RF + +WHPNV S G +C+ IL
Sbjct: 73 IIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYS-DGRVCISILHPPGDD 131
Query: 97 -------KDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRE 136
++W T+ +++LS+ ++LS P + AK++R+
Sbjct: 132 PSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRD 178
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 72.1 bits (169), Expect = 2e-13
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 46 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALT 105
P + Y G F+ +V YP PK++ TK++HPN+ + G +CL+IL++ W L
Sbjct: 69 PDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNID-LEGNVCLNILREDWKPVLN 127
Query: 106 LRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR 146
+ TV+ L L + DP + A R+NP+ F R
Sbjct: 128 INTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 43 IAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQ--W 100
I G T +EGG F L + E YP PPK +F +HPNV +G +CL IL + W
Sbjct: 46 IPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDYGW 104
Query: 101 AAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENP 138
A+T++ +L+ +Q LL P DP F ++P
Sbjct: 105 RPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDP 142
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 1 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 60
++ IA R+++E E + G K+ + WT ++ G T Y T+ L++
Sbjct: 12 LSKIACNRLQKELSEWQLNPPT-GFRHKVTDNLQKWTI---DVTGAPGTLYANETYQLQV 67
Query: 61 KVPETYPFNPPKIRFLTKI-WHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
+ PE YP P++ F++ HP++ S G ICLDIL D W+ A+T+ +V +S+ ++LS+
Sbjct: 68 EFPEHYPMEAPQVVFVSPAPSHPHIYS-NGHICLDILYDSWSPAMTVNSVCISILSMLSS 126
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 64.9 bits (151), Expect = 3e-11
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 1 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 60
++ IA R+++E E + G K V +N E+ G T Y T+ L++
Sbjct: 12 LSKIATNRLQKELVEWQMNPPT-GFKHK---VTDNLQRWIIEVIGAPGTLYANDTYQLQV 67
Query: 61 KVPETYPFNPPKIRFLTKI-WHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
PE YP P++ FL HP++ S G ICLDIL D W+ A+T+ ++ +S+ ++LS+
Sbjct: 68 DFPEHYPMESPQVIFLHPAPLHPHIYS-NGHICLDILYDSWSPAMTVSSICISILSMLSS 126
Query: 120 G-EPNDPQD 127
E P D
Sbjct: 127 STEKQRPTD 135
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 63.7 bits (148), Expect = 8e-11
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 1 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 60
++ IA R+++E E + G + V +N + E+ G T Y T+ L++
Sbjct: 12 LSKIACNRLQKELSEWQVNPPT-GFKHR---VTDNLQKWVIEVTGAPGTLYANETYNLQV 67
Query: 61 KVPETYPFNPPKIRFLTKI-WHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
+ P+ YP P++ F+ HP++ S G ICLDIL D W+ A+T+ +V +S+ ++LS+
Sbjct: 68 EFPQHYPMEAPQVIFVPPAPLHPHIYS-NGHICLDILYDSWSPAMTVSSVCISILSMLSS 126
Query: 120 G-EPNDPQD 127
E P D
Sbjct: 127 SPEKQRPTD 135
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 1 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 60
+ IA R+++EF E ++ G + V++N E+ G T Y T+ L++
Sbjct: 12 LTKIATNRLQKEFME-WQTNPPSGFKHR---VSDNLQRWIIEVHGVPGTLYANETYQLQV 67
Query: 61 KVPETYPFNPPKIRFLTKI-WHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSA 119
+ PE YP P++ F HP++ S G ICLD+L D W+ A+ L ++ LS+ ++LS+
Sbjct: 68 EFPEHYPMEAPQVIFQHPAPLHPHIYS-NGHICLDVLYDSWSPAMRLSSICLSILSMLSS 126
Query: 120 GE-PNDPQD 127
P+D
Sbjct: 127 SSVKQKPKD 135
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 59.7 bits (138), Expect = 1e-09
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 3 NIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKV 62
N A KRI +E KE+ + S+ L EN E + I GP DT +EGG + I++
Sbjct: 10 NPAVKRILQEVKEMQANPSDDFMSLPL---EENIFEWQFAIRGPGDTEFEGGIYHGRIQL 66
Query: 63 PETYPFNPPKIRFLTKIWHPNVSSVTGA-ICLDILK---DQWAAALTLRTVLLSLQALLS 118
P YPF PP LT PN T ICL I + W + ++RT L++L A +
Sbjct: 67 PADYPFKPPSFMLLT----PNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFM- 121
Query: 119 AGEPNDPQDAVVAKQFRENPR 139
P P A+ + + ++ R
Sbjct: 122 ---PTSPNGALGSVDYPKDER 139
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 2 ANIAAKRIKREFKEIMKSEEVIG-GSIKLGLVN------ENWTELKGEIAGPVDTPYEGG 54
A + R R +E+ + E+ IG G++ G+ + ++WT G I GP +T YEG
Sbjct: 6 AKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWT---GTILGPPNTAYEGK 62
Query: 55 TFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAI--CLDILKDQWAAALTLRTVLLS 112
F L++ + YP +PP +RF T+I V+ TG + L + W T+ +L+
Sbjct: 63 IFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVK 122
Query: 113 LQ 114
L+
Sbjct: 123 LK 124
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 48.0 bits (109), Expect = 4e-06
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 29/153 (18%)
Query: 39 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLT---KIWHPNVSSVTGAICLDI 95
L+ I G TPY G F +I+ P+TYP PPK+ + + +I +PN+ G +CL +
Sbjct: 637 LRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRI-NPNLYK-CGKVCLSL 694
Query: 96 L-------KDQW-AAALTLRTVLLSLQALLSAGEP-----------NDPQDAVVAKQFRE 136
+ +++W T+ +L+S+QAL+ +P P +K + E
Sbjct: 695 ISTWTGKKREKWLPKESTMLQLLVSIQALILNEKPYYNEPGYEKSMGTPLGESYSKDYSE 754
Query: 137 NPRLFTMTARHW-----TNVYAGGPNIVHECNS 164
N +F++ H+ ++ + +IV CN+
Sbjct: 755 NVFVFSLKTMHFEEFVRSHFFVRSHDIVKACNA 787
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 39 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLT---KIWHPNVSSVTGAICLDI 95
L+ I G TPY G F +I+ P+TYP PP + + + +I +PN+ + G +CL +
Sbjct: 303 LRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRI-NPNLYN-CGKVCLSL 360
Query: 96 L-------KDQWAA-ALTLRTVLLSLQALLSAGEP--NDP 125
L +++W T+ +L+S+QAL+ +P N+P
Sbjct: 361 LGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEP 400
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 39 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRF 75
L+ I G TPY G F +I+ P+TYP PP + +
Sbjct: 949 LRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYY 985
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.2 bits (107), Expect = 7e-06
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 9 IKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPF 68
+K+ +E E + +I + + E L+ + G TPY G F +I +P YP
Sbjct: 664 VKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPH 723
Query: 69 NPPKIRFLT--KIWHPNVSSVTGAICLDILK-------DQW-AAALTLRTVLLSLQALLS 118
PP + + + +PN+ +G +CL +L + W A + ++ +LLS QAL+
Sbjct: 724 EPPMVHYHSGGMRLNPNLYE-SGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVL 782
Query: 119 AGEP 122
+P
Sbjct: 783 NEKP 786
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 6 AKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPET 65
AKRI+ E++ + K + I + L+ I G TPY G F +I P+T
Sbjct: 334 AKRIQDEWRILEKD---LPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDT 390
Query: 66 YPFNPPKIRFLT---KIWHPNVSSVTGAICLDIL-------KDQWAA-ALTLRTVLLSLQ 114
YP PP + + + +I +PN+ + G +CL +L +++W T+ VL+S+Q
Sbjct: 391 YPSTPPIVHYHSGGLRI-NPNLYN-CGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQ 448
Query: 115 ALLSAGEP--NDP 125
L+ +P N+P
Sbjct: 449 GLILNQKPYFNEP 461
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 4 IAAKRIKREFKEIMKSEEVIG-GSIKLGL------VNENWTELKGEIAGPVDTPYEGGTF 56
+ R R +E+ + E+ IG G++ G+ + ++WT G I GP +T YEG F
Sbjct: 8 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWT---GTILGPHNTAYEGKIF 64
Query: 57 LLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLD--ILKDQWAAALTLRTVLLSLQ 114
L++ + YP +PP +RF ++I V+ G + + W T+ +L+ L+
Sbjct: 65 QLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLK 124
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 43.6 bits (98), Expect = 9e-05
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 2 ANIAAKRIKREFKEIMKSEEVIG-GSIKLGLVNENWTELK---GEIAGPVDTPYEGGTFL 57
+++ R R +E+ + E+ IG G++ G+ + + ++ G I GP +T +EG +
Sbjct: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
Query: 58 LEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDI--LKDQWAAALTLRTVLLSLQA 115
L++ + YP PP +RF +++ V+ TG + L W T+ +L+ L+
Sbjct: 68 LKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKK 127
Query: 116 LLS 118
+S
Sbjct: 128 EMS 130
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 43.2 bits (97), Expect = 1e-04
Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 2 ANIAAKRIKREFKEIMKSEEVIG-GSIKLGLVNENWTELK---GEIAGPVDTPYEGGTFL 57
+++ R R +E+ + E+ IG G++ G+ + + ++ G I GP +T +EG +
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66
Query: 58 LEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAI---CLDILKDQWAAALTLRTVLLSLQ 114
L++ + YP PP +RF ++I V+ TG + +L + W T+ +L L+
Sbjct: 67 LKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQLK 125
Query: 115 ALLSA 119
++A
Sbjct: 126 KEMAA 130
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 39 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIW--HPNVSSVTGAICLDIL 96
L+ I G TPY+ G F + +P YP PP + + W +PN+ G +CL +L
Sbjct: 882 LRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYE-EGKVCLSLL 940
Query: 97 -------KDQW-AAALTLRTVLLSLQALLSAGEP 122
+ W + ++ VL+SLQ L+ +P
Sbjct: 941 NTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKP 974
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 41.1 bits (92), Expect = 5e-04
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 7 KRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETY 66
KR+++E++ + K E + + N+ E + G TP+ GG + +IK P Y
Sbjct: 8 KRLQKEYRALCK--EPVSHVVARPSPNDI-LEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 67 PFNPPKIRFLTKIWHPNVSSVT-GAICL---DILKDQWAAALTLRTVLLSLQALLSAGEP 122
P+ PP I T PN VT ICL D + W ++ ++ L LLS
Sbjct: 65 PYKPPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSI---LTGLLSFMMD 117
Query: 123 NDPQDAVVAKQFRENPRL 140
N P V E RL
Sbjct: 118 NSPTTGSVNTSVAEKQRL 135
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 2 ANIAAKRIKREFKEIMKSEEVIG-GSIKLGLVNENWTELK---GEIAGPVD-TPYEGGTF 56
+++ R R +E+ + E+ IG G++ G+ + + ++ G I GP + T +EG +
Sbjct: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIY 67
Query: 57 LLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDI--LKDQWAAALTLRTVLLSLQ 114
L++ + YP PP +RF +++ V+ TG + L W T+ +L+ L+
Sbjct: 68 QLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 127
Query: 115 ALLS 118
+S
Sbjct: 128 KEMS 131
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 2 ANIAAKRIKREFKEIMKSEEVIG-GSIKLGLVNENWTELK---GEIAGPVD-TPYEGGTF 56
+++ R R +E+ + E+ IG G++ G+ + + ++ G I GP + T +EG +
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIY 66
Query: 57 LLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAI---CLDILKDQWAAALTLRTVLLSL 113
L++ + YP PP +RF ++I V+ TG + +L + W T+ +L L
Sbjct: 67 QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQL 125
Query: 114 QALLSA 119
+ ++A
Sbjct: 126 KKEMAA 131
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 7 KRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETY 66
KR+++E++ + K E + + N+ E + G TP+ GG + +IK P Y
Sbjct: 8 KRLQKEYRALCK--EPVSHVVARPSPNDI-LEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 67 PFNPPKIRFLTKIWHPNVSSVT-GAICL---DILKDQWAAALTLRTVLLSLQALLSAGEP 122
P+ PP I T PN +T ICL D + W ++ ++L L + + P
Sbjct: 65 PYKPPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At3g58460.1 68416.m06516 rhomboid family protein /
ubiquitin-associated (UBA)/TS-N domain-containing
protein contains Pfam profiles PF01694: Rhomboid family,
PF00627: UBA/TS-N domain
Length = 403
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 165 KVQRMLDMGIDEHQARVALSSYDWDLERATEQL 197
++Q+++ MG D Q VAL++ D DL A E L
Sbjct: 366 QIQKLVAMGFDRTQVEVALAAADDDLTVAVEIL 398
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 159 VHECNSKVQRMLDMGIDEHQARVALSSYDWDLERATEQL 197
++ S++ R L G+D+ Q+ A S+ + D+E +E+L
Sbjct: 267 IYILKSQLARYLPSGLDDEQSEGAASTQELDIETLSEEL 305
>At5g58320.1 68418.m07300 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 490
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 159 VHECNSKVQRMLDMGIDEHQARVALSSYDWDLERATEQL 197
++ S++ R L G+D+ Q+ A S+ + D+E +E+L
Sbjct: 267 IYILKSQLARYLPSGLDDEQSEGAASTQELDIETLSEEL 305
>At3g20630.1 68416.m02610 ubiquitin-specific protease 14, putative
(UBP14) similar to ubiquitin-specific protease 14
GI:11993473 [Arabidopsis thaliana]
Length = 797
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 164 SKVQRMLDMGIDEHQARVALSSYDWDLERATEQLF 198
S V +L G E AR AL + D+E+AT+ +F
Sbjct: 674 SSVDTLLSFGFAEDVARKALKASGGDIEKATDWVF 708
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Query: 89 GAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHW 148
G + D W+ +TL S++ L+ G P DP A+ + R R R
Sbjct: 371 GGLSFDAFLSMWSL-MTLLEPARSVENLIYIGFPGDPSTAIRVTRRRRLDRKKQQCERKV 429
Query: 149 TNVYAGGPN 157
+ GPN
Sbjct: 430 FQCFVFGPN 438
>At4g34370.1 68417.m04883 IBR domain-containing protein similar to
SP|Q94981 Ariadne-1 protein (Ari-1) {Drosophila
melanogaster}; contains Pfam profile PF01485: IBR domain
Length = 597
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 172 MGIDEHQARVALSSYDWDLER 192
+ I EH AR L Y WD+E+
Sbjct: 64 LSIKEHHARTLLIHYQWDVEK 84
>At4g15475.1 68417.m02365 F-box family protein (FBL4) 99.7%
identical to F-box protein family, AtFBL4 (GP:21536497)
[Arabidopsis thaliana]; similar to grr1 GI:2407790 from
[Glycine max]
Length = 610
Score = 27.1 bits (57), Expect = 8.5
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 71 PKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGE 121
P+I L+ IW PNVSSV +C K +L L+ + Q L + G+
Sbjct: 140 PRIENLSLIWCPNVSSV--GLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGK 188
>At3g62360.1 68416.m07005 expressed protein
Length = 1227
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 51 YEGGTFLLEIKVPETYPFNPPKI 73
Y+ G+F+L+I P+ + +NP K+
Sbjct: 86 YDKGSFILKINGPDGWSWNPDKV 108
>At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 63 PETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQ--WAAALTLRTVLLSLQALLSAG 120
PE + PP+++F W+ + G D D+ + + + +L + + A
Sbjct: 61 PEIWRTFPPRMKFAVFTWYGATIEMDGVTETDYTADETPMVSYINVHAILDARRRFAKAS 120
Query: 121 EPNDPQDA 128
NDP+ +
Sbjct: 121 TSNDPESS 128
>At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 63 PETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQ--WAAALTLRTVLLSLQALLSAG 120
PE + PP+++F W+ + G D D+ + + + +L + + A
Sbjct: 61 PEIWRTFPPRMKFAVFTWYGATIEMDGVTETDYTADETPMVSYINVHAILDARRRFAKAS 120
Query: 121 EPNDPQDA 128
NDP+ +
Sbjct: 121 TSNDPESS 128
>At2g16090.1 68415.m01845 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 593
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 166 VQRMLDM-GIDEHQARVALSSYDWDLER 192
++R++++ + EH AR L Y WD+E+
Sbjct: 57 LRRVMELLSVKEHHARTLLIHYRWDVEK 84
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,825,590
Number of Sequences: 28952
Number of extensions: 198493
Number of successful extensions: 564
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 461
Number of HSP's gapped (non-prelim): 73
length of query: 199
length of database: 12,070,560
effective HSP length: 78
effective length of query: 121
effective length of database: 9,812,304
effective search space: 1187288784
effective search space used: 1187288784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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