Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000626-TA|BGIBMGA000626-PA|IPR002562|3'-5' exonuclease,
IPR002121|HRDC, IPR012588|PMC2NT, IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold
(709 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0) 258 1e-68
SB_54854| Best HMM Match : LepA_C (HMM E-Value=5.1) 54 3e-07
SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015) 42 0.002
SB_5852| Best HMM Match : 3_5_exonuc (HMM E-Value=3.4e-07) 39 0.016
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.064
SB_45200| Best HMM Match : 3_5_exonuc (HMM E-Value=2.3e-07) 37 0.064
SB_8065| Best HMM Match : 3_5_exonuc (HMM E-Value=1.2e-07) 36 0.085
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 35 0.20
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 35 0.26
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.26
SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.45
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.45
SB_26436| Best HMM Match : Somatomedin_B (HMM E-Value=3.7) 33 0.60
SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09) 33 0.60
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 33 0.60
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 33 0.79
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 33 0.79
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.79
SB_39777| Best HMM Match : DUF1168 (HMM E-Value=2.2) 33 1.0
SB_29057| Best HMM Match : Rad9 (HMM E-Value=9.3e-10) 32 1.4
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015) 32 1.4
SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_30703| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.96) 32 1.4
SB_18400| Best HMM Match : MED7 (HMM E-Value=1.8) 32 1.8
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092) 31 2.4
SB_595| Best HMM Match : CH (HMM E-Value=0) 31 2.4
SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11) 31 3.2
SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 31 3.2
SB_30516| Best HMM Match : GETHR (HMM E-Value=0.9) 31 3.2
SB_22089| Best HMM Match : Nsp1_C (HMM E-Value=3.6) 31 4.2
SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63) 31 4.2
SB_53134| Best HMM Match : PAN (HMM E-Value=0.0002) 31 4.2
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 31 4.2
SB_33874| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.2
SB_59496| Best HMM Match : DUF1665 (HMM E-Value=4.1) 30 5.6
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 30 5.6
SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.4
SB_38721| Best HMM Match : Methionine_synt (HMM E-Value=1.5) 30 7.4
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.4
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.4
SB_57914| Best HMM Match : Ion_trans_2 (HMM E-Value=7.5e-07) 30 7.4
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 30 7.4
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 30 7.4
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.4
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 30 7.4
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 30 7.4
SB_58632| Best HMM Match : Flp_Fap (HMM E-Value=1.1) 29 9.7
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 9.7
SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13) 29 9.7
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_40824| Best HMM Match : His_leader (HMM E-Value=3.1) 29 9.7
SB_25756| Best HMM Match : Secretogranin_V (HMM E-Value=7.3) 29 9.7
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
>SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0)
Length = 470
Score = 258 bits (631), Expect = 1e-68
Identities = 154/434 (35%), Positives = 234/434 (53%), Gaps = 30/434 (6%)
Query: 229 HHSYRTYQGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLW 288
HHSYR++ G CL+QIST + DF++D L +R +H LN FT+P LKVFHGAD DV W
Sbjct: 1 HHSYRSFLGFVCLMQISTRDH-DFLVDTLELRNDLHLLNESFTNPNILKVFHGADMDVAW 59
Query: 289 LQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTYRLADWRIRPLPDVLI 348
LQRDFG+Y+V +FDT A++ L L SL FLL K+CGV DK Y+LADWRIRPLP+ +I
Sbjct: 60 LQRDFGIYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTADKQYQLADWRIRPLPEEMI 119
Query: 349 KYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDESHIPL 408
+YAR DTHYLLY+ ++N++I N+LLSV+ S + C Y K + ES++ L
Sbjct: 120 RYAREDTHYLLYIHDRLRNELIRTGNENNNLLLSVYSRSTEVCQKHYEKPLFTSESYMNL 179
Query: 409 YIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNAC 468
Y + ++ + Q+ A + LY WRD+ AR+ DES E QGV AC
Sbjct: 180 YTKQRRPLNPVQLRAFRALYAWRDTIARREDESY-----------------GEPQGVLAC 222
Query: 469 CDPMPPFVKQNVITIHRMILSCRELPKDAQIFHIPSGIRNMMNAGIEQIHYEMHDLDHEA 528
C+P+P VKQ V +H++IL R+ PS +AG ++ + D
Sbjct: 223 CNPVPTLVKQYVNEVHQLILQSRDASTTTS---TPSPSTRPQSAGGKRPRPRLLS-DGLP 278
Query: 529 EYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKV 588
R + + + V + S F + +P P+ + E+ ++ + +A
Sbjct: 279 LKRTAPFEGHKLIGPPVKVVKPVISLF--DQREVLPTKT--PDSSTGEVNRN--QPKADA 332
Query: 589 AAISQGNELIEEEVLQKLQ--KAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTE 646
A I+Q + E+ + Q A+ +H K + + + +D+EP+ T R++ +
Sbjct: 333 AKINQQWKDATEQPMNSTQGKVAKDDEDHAKVTAGKRDRSQSDSEPEDTTPLRQKGAGKD 392
Query: 647 NAEEQNVGRAHKNE 660
N+ ++ + NE
Sbjct: 393 NSRKRRHRKKTGNE 406
>SB_54854| Best HMM Match : LepA_C (HMM E-Value=5.1)
Length = 372
Score = 54.4 bits (125), Expect = 3e-07
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 65 INISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI-SEKKMGSTIFIGAKNIPRPQL 123
++ S+D SG + + S S WN+ + K G+ + AKNI RPQ+
Sbjct: 223 LDTSLDEASGLSKNRKPILSPAVRQGGPMVSSWNRKTRDNNNKDGNFRLLLAKNIQRPQM 282
Query: 124 TFKDTIDNSENLWVPKISDKPNNIKPL 150
FKD IDNS ++P I KPN +KPL
Sbjct: 283 KFKDKIDNSNTPFIPIIKYKPNALKPL 309
>SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015)
Length = 437
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 280 HGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTYRLADWR 339
H + D + + F V+ L DT H AK L SL+ + + G K ++ ++W+
Sbjct: 238 HCSSQDAIMISNQFKVHAKNLIDTCHWAKDLHCMPRSLQAMCAIFLGEHLSKRHQQSNWK 297
Query: 340 IRPLPDVLIKYARMDTHYLLYVWRVMK 366
L + YA D L V++ MK
Sbjct: 298 KSDLSPGQVAYAATDAWVSLRVYQEMK 324
>SB_5852| Best HMM Match : 3_5_exonuc (HMM E-Value=3.4e-07)
Length = 653
Score = 38.7 bits (86), Expect = 0.016
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 241 LIQISTDEGGDFIIDALAVREHIHK-LNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 299
L+QI+T F+I + + L + D LK G D L FG+ + G
Sbjct: 90 LLQIATPLNDCFLIRLCKMSGAVPPTLKGLLEDRAVLKFGVGIMDDAKKLSDTFGLAVSG 149
Query: 300 LFDTYH------------AAKSLGLPALSLKFLLMKYCGVDTDKTYRL--ADWRIRPLPD 345
D H AAKS G LSL L ++ GV DK++ + ++W + L D
Sbjct: 150 CVDLRHLVLRCQGLSELTAAKSKGQGKLSLGALAQRFLGVRMDKSWHVQCSNWEVEHLSD 209
Query: 346 VLIKYARMDTHYLLYVWRVMKNQ 368
+ YA D ++V+ + Q
Sbjct: 210 RQVAYAANDAIVAVHVFMALVQQ 232
>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 36.7 bits (81), Expect = 0.064
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 575 EEIAKDIKEMEAKVAAISQGNELI---EEEVLQKL--QKAQSHIEHDKTSVAPQAAAAND 629
+E K+I + +A + +L+ +E+V K +KA+ +D T V+ A +D
Sbjct: 421 KEKKKNISLGQGGESATNSSGDLLNGEKEKVASKKAKKKAKEQCPNDVTEVSVSPAEKSD 480
Query: 630 TEPDTK--TAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVT 674
TEP TK + + K T++AE+Q +A KN+ V KK K + T
Sbjct: 481 TEPITKPKSTSKMTKDQTKDAEKQYDAKA-KNDVVEKKPKAHKAKKT 526
>SB_45200| Best HMM Match : 3_5_exonuc (HMM E-Value=2.3e-07)
Length = 347
Score = 36.7 bits (81), Expect = 0.064
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 276 LKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGL--PALSLKFLLMKYCGVDTDK-- 331
LKV G D + L RD + G D AK L L LK L G++ DK
Sbjct: 132 LKVGSGISGDAVKLLRDTNILCNGRSDIQVYAKVLALNQDGTGLKKLAKTILGIELDKPK 191
Query: 332 TYRLADWRIRPLPDVLIKYARMD--THYLLYV---WRVMKNQIIEKNAGQ 376
L++W + PL + YA +D + L+V R+ K+ ++ K Q
Sbjct: 192 NISLSNWELFPLTYKQVSYAALDAWVSFKLFVELKQRLHKSGLVRKTGEQ 241
>SB_8065| Best HMM Match : 3_5_exonuc (HMM E-Value=1.2e-07)
Length = 317
Score = 36.3 bits (80), Expect = 0.085
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 276 LKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGL--PALSLKFLLMKYCGVDTDKT- 332
LKV G D + L RD + G DT AK L L LK L G++ DK
Sbjct: 148 LKVGSGISGDAVKLLRDTEILCNGRSDTQVYAKVLALNQDGTGLKKLAKTILGIELDKPK 207
Query: 333 -YRLADWRIRPLPDVLIKYARMD--THYLLYV---WRVMKNQIIEKNAGQ 376
L++W + PL YA +D + L+V R+ K+ ++ K Q
Sbjct: 208 YISLSNWELFPLTYEQASYAALDAWVSFKLFVELKQRLHKSGLVRKTGEQ 257
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 35.1 bits (77), Expect = 0.20
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 571 EGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDT 630
EG E+ + KE E K A ++ E E+E +K +K + + ++T + +T
Sbjct: 10 EGETEKEGETEKEAETKKEAETEKEE--EKETKKKTEKEEEKWKQEETEKEAETEKEAET 67
Query: 631 EPDTKTAQRKRKIVTENAEEQ-NVGRAHKNEHVPKKIDVAKKEVT 674
E K A++++K TE EE+ K K+ + K+E T
Sbjct: 68 E---KEAEKEKKKKTEKEEEKGKQEETGKEAETEKQAETEKQEET 109
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 34.7 bits (76), Expect = 0.26
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 64 RINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQL 123
R+ S++ S +L S N P HNS + + + K S + A + P+L
Sbjct: 2044 RVISSVEKTSKTSLKSSINIMVSNKGPKHNSEMSSTTSVEKTKSQSKRSLEATKVS-PEL 2102
Query: 124 TFKDTIDNSENLWVPKIS-DKPNNIKPLALNILYT 157
+F+ T D+ +NL +S K + KP + +I+ T
Sbjct: 2103 SFETTKDSKQNLSKVSLSRGKAESPKPSSSDIVNT 2137
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 34.7 bits (76), Expect = 0.26
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 571 EGTIEEIAKDIKEMEAKVAAISQGNELIEEEVL-QKLQKAQSH---IEHDKTSVAPQAAA 626
E +I+++ +D++ + ++A ++Q E L Q+L++ Q++ IE + ++ + A
Sbjct: 986 EQSIDKLERDLRLKDEELAKVTQNRVAFEANSLAQQLKEKQAYEVRIETLENNLLSKTAE 1045
Query: 627 ANDTEPDTKTAQRKR-----KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEV 673
++ T Q+ R K +TE E++ G A K + ++ID + E+
Sbjct: 1046 MDNLLSKIDTEQKGRMEAEVKSLTEMIEKERNGHAQKRGQLEREIDKGRAEI 1097
>SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 575 EEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDT 634
EE ++++E E K + + ++EE Q++QK Q E ++ Q + + +
Sbjct: 45 EEQKQEVQE-EQKQEVQEEQKQKVQEEQKQEVQKEQKQEEQEEQKQEVQEEQKQEEQEEQ 103
Query: 635 KTAQRKRKIVTE-NAEEQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQ 680
K ++K+++ E EEQ + E +++ +K+ Q Q
Sbjct: 104 KQEEQKQEVQEEQKQEEQEEQKQEVQEEQKQEVQEEQKQEVQEEQKQ 150
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 33.9 bits (74), Expect = 0.45
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 528 AEYREEQKSNVEQVNYCLT---VTTKITSKFNPE--VEAFIPASMMFPEGTIEEIAKDIK 582
A YR E Q+ L K +K E V F +M EE +K +K
Sbjct: 877 ASYRSEMDEKENQIRSLLNRIDSVEKDNTKLKKEKVVVQFQQGAMKHQLAEAEENSKKMK 936
Query: 583 ----EMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQ 638
EME +A + + E+++EE +K++ A+ +E K +T D KT +
Sbjct: 937 AQLHEMELAIAELQKEKEMVDEEQDRKVKDAEKDLEEVKLERRKHQEEL-ETLKD-KTLK 994
Query: 639 RKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEV 673
+R++ +++++N+ +N + +K+ + V
Sbjct: 995 VEREL--RDSQQENIKMNIENSKLSRKVSSLESSV 1027
>SB_26436| Best HMM Match : Somatomedin_B (HMM E-Value=3.7)
Length = 233
Score = 33.5 bits (73), Expect = 0.60
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 519 YEMHDLDHEAEYREEQKSNVEQVNYCL-TVTTKITSKFNPEVEAFIPASMMFPEGTIEEI 577
YE D D E E EE++ + V Y L +TT+ ++K + + + + GTI+E
Sbjct: 10 YESDDDDEEEEEEEEEEEEEDDVTYDLRQLTTRHSTKMRTDCTDYELSVDLPTRGTIKEA 69
Query: 578 AKDIKEM 584
+D++ +
Sbjct: 70 LEDVERV 76
>SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09)
Length = 1396
Score = 33.5 bits (73), Expect = 0.60
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 503 PSGIRNMMNAGIEQIHYEMHDLDHEAEYREEQKSNVEQVNYCLT-VTTKITSKFNPEVEA 561
PSG++ G + HD D E E EE++ ++V Y L VTT+ ++K +
Sbjct: 83 PSGVQQQQQEGRGK--KRSHDSDDEDEEEEEEEE--DEVTYDLRQVTTRHSTKMRTDCTD 138
Query: 562 FIPASMMFPEGTIEEIAKDIKEMEAKV 588
+ + + GTI+E +D++ + +V
Sbjct: 139 YELSVDLPTRGTIQEALEDVERVLDRV 165
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 33.5 bits (73), Expect = 0.60
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 16/167 (9%)
Query: 514 IEQIHYEMHDLDHEAEYREEQKSNVEQVNYC---LTVTTKITSKFNPEVEA--FIPASMM 568
IE+ + H + + EE K +E+ + + + K + E+E P +
Sbjct: 174 IEKNQHRPHHIPIVQKTNEEDKEEIEKNQHRPHHIPIVEKTNEEDKEEIEKNQHRPHHIP 233
Query: 569 FPEGTIEEIAKDIKEMEAK---VAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAA 625
E T EE ++I++ + + + + + NE +EE+ +K Q HI Q
Sbjct: 234 IVEKTNEEDKEEIEKNQHRPHHIPIVEKTNEEDKEEI-EKNQHRPHHIP------IVQKT 286
Query: 626 AANDTEPDTKTAQRKRKI-VTENAEEQNVGRAHKNEHVPKKIDVAKK 671
D E K R I + E E++ KN+H P I + +K
Sbjct: 287 NEEDKEEIEKNQHRPHHIPIVEKTNEEDKKEIEKNQHRPHHIPIVEK 333
Score = 30.7 bits (66), Expect = 4.2
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 507 RNMMNAGIEQIH-YEMHDLDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPA 565
RN++N ++ I+ +++ ++ +++EE + N + ++ I K N E +
Sbjct: 109 RNLLNKRMKVINSHKVQRMEQAKKHKEEIEKNQHRPHHI-----PIVEKTNEEDKEVGRI 163
Query: 566 SMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEH-DKTSVAPQA 624
+ + + EEI K+ + + + + NE +EE+ +K Q HI +KT+
Sbjct: 164 RVQYKKHK-EEIEKN-QHRPHHIPIVQKTNEEDKEEI-EKNQHRPHHIPIVEKTN----- 215
Query: 625 AAANDTEPDTKTAQRKRKI-VTENAEEQNVGRAHKNEHVPKKIDVAKK 671
D E K R I + E E++ KN+H P I + +K
Sbjct: 216 --EEDKEEIEKNQHRPHHIPIVEKTNEEDKEEIEKNQHRPHHIPIVEK 261
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 33.1 bits (72), Expect = 0.79
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 580 DIKEMEAKVAA--ISQGNELIEEEVLQKLQ----KAQSHIEHDKTSVAPQAAAANDTEPD 633
D+K EAK+A + Q ++ E ++ L+ + Q IE K ++A A ND E
Sbjct: 541 DLKGHEAKLAETRMKQSTHHLQLEEIKTLENNLDEQQQLIEKSKETIALATAKCNDIELK 600
Query: 634 TKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQ 680
K A+ R+ + AEE ++ +A K K K++ G Q +
Sbjct: 601 MKEAKTYRERELKKAEE-DLKKAKKRAEQSIKETKTKQQEVEGMQLE 646
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 33.1 bits (72), Expect = 0.79
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 515 EQIHYEMHDLDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPASMMFPEGTI 574
EQ+ + L E + E S VEQ++ + + N E+ + I A+ F
Sbjct: 411 EQLQAKSKALVEETQVSPEADSEVEQIHGWIKFAAEGFMDANSEMGSNITAAQDFIT-QH 469
Query: 575 EEIAKDIKEMEAKVAAISQ 593
E++ +++KEME ++A +S+
Sbjct: 470 EDLHREVKEMEGQIARVSE 488
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 33.1 bits (72), Expect = 0.79
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Query: 506 IRNMMNAGIEQIHYEMHDLDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPA 565
+ +++ I+ I+ E+H L E + EE+ +EQ T T+K E ++
Sbjct: 2651 LASLLQQQIDAINMELHYLQEEHKSTEEKTEELEQ-----TSTSKSALHRLSATEEYLAN 2705
Query: 566 SMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQK--AQSHIEHDKTSVAPQ 623
S FP ++ + D + K + N L +E A E KTS+A
Sbjct: 2706 STSFPFPPLDPM--DTTPIWVKSSKEGSLNNLNDESPTPPTPSSLASDSTESPKTSIASP 2763
Query: 624 AAAANDTEPDTKTAQRKRKIVTE 646
+ PDT TA I +
Sbjct: 2764 VPESLTPTPDTLTAPTNNGIAKQ 2786
>SB_39777| Best HMM Match : DUF1168 (HMM E-Value=2.2)
Length = 333
Score = 32.7 bits (71), Expect = 1.0
Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 578 AKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTA 637
AK + AK+A+ + G ++ K +K Q K A +A ++++ + +
Sbjct: 131 AKKKQNGTAKLAS-AHGTSKVKRGADDKKEKKQKQCREKKRPKAKRALVISESDEEEREF 189
Query: 638 QRKRKIVTENAEEQNVGRAHKNEH-VPKKI-DVAKKEVTAGYQYQNATY 684
+K+K T ++ ++ + + +E +P KI + AKK A + +TY
Sbjct: 190 IQKKKKKTTHSNKKPIAVSDSDEEPLPPKIREAAKKNEKAAKSNKKSTY 238
>SB_29057| Best HMM Match : Rad9 (HMM E-Value=9.3e-10)
Length = 336
Score = 32.3 bits (70), Expect = 1.4
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 326 GVDTDKTYRLADWRIRPLPD 345
GVDTD T+ L + R+RPLPD
Sbjct: 238 GVDTDVTFCLKELRVRPLPD 257
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 32.3 bits (70), Expect = 1.4
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 571 EGTIEEIA-KDIKEMEAKVAAISQGNELIE--EEVLQKLQKAQSHIE---HDKTSVAPQA 624
+GT+E IA K KE A IS+ EL + E+ ++QKA+ H K +A +
Sbjct: 370 QGTVESIAMKTPKERTAMFEKISRSGELADSYEKKKAEMQKAEEETSFNYHKKKGIAAER 429
Query: 625 AAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNE 660
A + + + + + ++ +E + + + NE
Sbjct: 430 REAKQEKEEADKYNKWNQDLVDSLQELQLFKLYHNE 465
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 575 EEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIE--HDKTSVAPQ--AAAANDT 630
+ +AK K++ +V ++ + + I++ V + QKA H++ H+K Q A D
Sbjct: 830 QNVAKGFKDVGQQVQSVDKKVQDIDQNVAKGFQKAGQHVQSVHEKAQDIEQNVAKGFQDV 889
Query: 631 EPDTKTAQRKRKIVTENAEEQNVGRAH----KNEHVPKK-IDVAKKEVTAG 676
+ Q+ + + ++AE H K E KK +D +E + G
Sbjct: 890 GQHFQNLQKGIQAIKKDAERDKAAAEHEELVKQEKAIKKWVDFLIEEYSTG 940
>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
Length = 779
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 218 MAVEQIAVDVEHHS--YRTYQGITCLIQISTDEGGDFIIDALAVREHI-HKLNVV 269
M E IA VE H TY G + ++Q+ D+ D I+DA R + HK+ V
Sbjct: 108 MLFEGIARMVEEHQPFVETYYGYSNILQVECDKQADQILDAFVKRRDLQHKIKSV 162
>SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Query: 533 EQKSNVEQVNYCLTVTTKITSK--FNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAA 590
E + VEQ K K F E + F+ P T+EE+++ +++ +A
Sbjct: 66 ENEGQVEQAEEVKLKFNKFEEKKKFKTESKKFVQKIHSNPSFTVEEMSEMVQDFYVAIAE 125
Query: 591 ISQGNELIEEEVLQKLQKAQSHIE-HDKTSVAPQAAAANDTEPDTKTAQRKRKI 643
Q + L + + + L + +IE + T + T+ +TK + +RKI
Sbjct: 126 RLQSHVLFKGQPQEILDRTLDNIEKYIMTKLYRVVFCPASTDDETKDLELQRKI 179
>SB_30703| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.96)
Length = 204
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/117 (23%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 575 EEIAKDIKEMEA----KVAAISQGNELIEEEVLQKLQK---AQSHIEHDKTSVAPQAAAA 627
E++++ KE + K +SQG++ EE+V Q ++ +Q H E D + + +
Sbjct: 77 EDVSQGHKEEDVSQGHKEEDVSQGHK--EEDVSQGHKEEDVSQGHKEEDVSQGHEEEDVS 134
Query: 628 NDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQNATY 684
+ E + + K + V+ EE++V + HK E V + +++V+ G++ ++ ++
Sbjct: 135 HGHEEEDVSQGHKEEDVSHGHEEEDVSQGHKEEDVSQ--GHKEEDVSHGHKEEDVSH 189
Score = 29.5 bits (63), Expect = 9.7
Identities = 25/116 (21%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 575 EEIAKDIKEMEA----KVAAISQGNELIEEEVLQKLQK---AQSHIEHDKTSVAPQAAAA 627
E++++ KE + K +SQG++ EE+V Q ++ +Q H E D + + +
Sbjct: 5 EDVSQGHKEEDVSQGHKEEDVSQGHK--EEDVSQGHKEEDVSQGHKEEDVSQGHKEEDVS 62
Query: 628 NDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQNAT 683
+ + + + K + V++ +E++V + HK E V + +++V+ G++ ++ +
Sbjct: 63 HGHKEEDVSQGHKEEDVSQGHKEEDVSQGHKEEDVSQ--GHKEEDVSQGHKEEDVS 116
>SB_18400| Best HMM Match : MED7 (HMM E-Value=1.8)
Length = 303
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 589 AAISQGNELIEEEVLQKLQKAQSHIEHDKTS----VAPQAA---AANDTEPDTKTAQR 639
A++ NEL++E V+QK ++ +H K S APQ A ++D EP+ + +Q+
Sbjct: 38 ASMQSSNELLKELVIQKRSRSPNHEPRSKRSKANPPAPQRAISLTSSDEEPEPEASQK 95
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 523 DLDHEAEYREEQKSNVEQVNYCLT-VTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDI 581
D + E E EE++ + V+Y L VTT+ ++K + + ++ + GTI+E +D+
Sbjct: 104 DEEEEEEEEEEEEEEKDDVSYDLRQVTTRHSTKMRTDCTDYELSADLPTRGTIKEALEDV 163
Query: 582 KEMEAKV 588
+ + +V
Sbjct: 164 ERVLDRV 170
>SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092)
Length = 783
Score = 31.5 bits (68), Expect = 2.4
Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 563 IPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEE------VLQKLQKAQSHIEHD 616
I A +F + I+ + K+I+E++ K + + +EEE L+ L+++ +H + +
Sbjct: 296 IEAKEVFSDSRIQSLQKEIEELKEKYSKAQSNVQSLEEEKYGKDGELRMLKESLAHFQAE 355
Query: 617 KTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVT 674
+ Q A D ++ K K + + E + + + + ++ KK +
Sbjct: 356 EAKKREQIRAMEDQRKQEQS--EKEKELQKQVEHLTTRLKFQEQEIAQAMEQRKKHTS 411
>SB_595| Best HMM Match : CH (HMM E-Value=0)
Length = 905
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 317 LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMD 354
L L+++ G+ DKT +++DW RPL + YA D
Sbjct: 84 LSELVLQCVGLPLDKTCQVSDWERRPLSQEQLTYADSD 121
>SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1214
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 589 AAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAA------AANDTEPDTKTAQRKRK 642
A++ NEL++E V+QK ++ +H K S A +A +D EP+T +
Sbjct: 1148 ASMQSSNELLKELVIQKRSRSPNHEPRSKRSKANPSAQQRASPTTSDEEPETSQKASSSR 1207
Query: 643 IVTENA 648
+T N+
Sbjct: 1208 QMTLNS 1213
>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
Length = 1477
Score = 31.1 bits (67), Expect = 3.2
Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 9/155 (5%)
Query: 512 AGIEQIHYEMHDLDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPE---VEAFIPASMM 568
AGI HY DL + + R E N + V K+ S +P V +F +
Sbjct: 622 AGIGDAHYIRGDLVLDYKIRYENHPNASAPAQRVLVRHKLDSNLDPRTFTVGSFGFGNFT 681
Query: 569 FPEGTIEEIAKDIKEME---AKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAA 625
T + +D+ + + A I+ G +++ EV +L+ S E ++ A
Sbjct: 682 KEVKTRSPVLQDLLDYQPAHAMFVRITAGIDIVSNEVTWELETIDSKTEANQN--RDHAI 739
Query: 626 AANDTEPDTKTAQRKR-KIVTENAEEQNVGRAHKN 659
A N K A R + N + A++N
Sbjct: 740 AVNQNRDHAKAANHNRDHAIAANQNRDHAIAANQN 774
>SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 647
Score = 31.1 bits (67), Expect = 3.2
Identities = 20/92 (21%), Positives = 38/92 (41%)
Query: 581 IKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRK 640
+ + ++ A I + N +E E+ Q + Q+ +E + + N D + Q K
Sbjct: 264 LNQKNSECARIKRENVELESEIEQLKESHQAAVEVYNKQIDESKTSLNAERKDRQVLQTK 323
Query: 641 RKIVTENAEEQNVGRAHKNEHVPKKIDVAKKE 672
R VT+ + E + KK+ K+E
Sbjct: 324 RDHVTKESNEFKSDYGKYMASMSKKVTEGKQE 355
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 576 EIAKDIKEMEAKVAAISQGNELIEEEVLQK-LQKAQSHIEHDKTSVAPQAAAANDTEPDT 634
E +I EM+ K+ ++ + ++EE+ K + H+EH + A A
Sbjct: 280 ESQDEITEMKRKLKIMNHQIDQLKEEITAKEATLVKEHLEHQRVEKEKDALKAELQRMKQ 339
Query: 635 KTAQRKRKIVTENAEEQNV 653
+ A+ K I + AEE+ +
Sbjct: 340 QAAESKAYIEQQEAEERKL 358
>SB_30516| Best HMM Match : GETHR (HMM E-Value=0.9)
Length = 1058
Score = 31.1 bits (67), Expect = 3.2
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 569 FPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHI--EHDKTSVAPQAAA 626
+P E+ + + E K I NE + +L + K QS I ++++ P
Sbjct: 680 YPNTKREKQIGILTQNEEKQRGILTQNEKKQRGILTQNVKKQSGILTQNEEKQRYPNTKR 739
Query: 627 ANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQN 681
T+ +++R I+T+N E+Q+ G +NE + D K+E G QN
Sbjct: 740 GKAKRYPTQNEEKQRGILTQNEEKQS-GILTQNEEKQRYPD-TKREKQRGILTQN 792
>SB_22089| Best HMM Match : Nsp1_C (HMM E-Value=3.6)
Length = 272
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 589 AAISQGNELIEEEVLQKLQKAQSHIEHDKTS----VAPQAA---AANDTEPDTKTAQR 639
A++ NEL++E V+QK ++ +H K S APQ A ++D EP+ + +Q+
Sbjct: 38 ASMQSSNELLKELVIQKRSRSPNHEPLSKRSKANPPAPQRAISPTSSDEEPEPEASQK 95
>SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63)
Length = 592
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 580 DIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQR 639
D E A Q IEE +K +EHD +PQA++ D+ D +T +
Sbjct: 465 DTSFRETPEAVEDQNEAKIEESGPEKPLNETCDLEHDGMLDSPQASSPRDSPSDHETPKP 524
Query: 640 KR 641
KR
Sbjct: 525 KR 526
>SB_53134| Best HMM Match : PAN (HMM E-Value=0.0002)
Length = 648
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 589 AAISQGNELIEEEVLQKLQKAQSHIEHDKTS----VAPQAA---AANDTEPDTKTAQR 639
A++ NEL++E V+QK ++ +H K S APQ A ++D EP+ + +Q+
Sbjct: 301 ASMQSSNELLKELVIQKRSRSPNHEPLSKRSKANPPAPQRAISPTSSDEEPEPEASQK 358
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 30.7 bits (66), Expect = 4.2
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 575 EEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDT 634
EE K KE+E K + ++EE ++ + + +E ++T+ A + P
Sbjct: 217 EEEEKKAKEVEEKRMGEDEEQIKLKEEEVEIKEDKTAELELEETTEKSNHAKRENLSPSK 276
Query: 635 KTAQRKRKIVTENAEEQNVGR-AHKNEHVPKKIDVAKK 671
+ + K T+ +E+NV + K+ ++ DV KK
Sbjct: 277 IHKKDREKTPTKKNKEKNVKKNEEKDVQKEEEKDVQKK 314
>SB_33874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 30.7 bits (66), Expect = 4.2
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 563 IPASMMFPEGTIEEI--AKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSV 620
IP+ + +EE A+DIK EAK + + E ++EE ++ L+ ++++ + +
Sbjct: 72 IPSEQSEDDNEVEEQGEAEDIKS-EAKKEEVLKIREKVKEENMKDLEADVANMDKAEQEM 130
Query: 621 APQAAAANDTEPDTKTAQRKRK 642
AP+ + + T+ Q K K
Sbjct: 131 APELGSKSPTQQKKAMTQFKPK 152
>SB_59496| Best HMM Match : DUF1665 (HMM E-Value=4.1)
Length = 184
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 589 AAISQGNELIEEEVLQKLQKAQSHIEHDKTS----VAPQAA---AANDTEPDTKTAQR 639
A++ N+L++E V+QK ++ +H K S APQ A ++D EP+ + +Q+
Sbjct: 34 ASMQSSNKLLKELVIQKRSRSPNHEPRSKRSKANPPAPQRAISPTSSDEEPEPEASQK 91
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 30.3 bits (65), Expect = 5.6
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 604 QKLQKAQSHI--EHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEH 661
Q+L K + H H T V+ ++ A TE +T A+ KRK ++ + QN + + E
Sbjct: 28 QQLNKTREHTIRVHTVTRVSDESGAEQTTE-ETTDARGKRKKESDRSRRQNKRQKIQEEE 86
Query: 662 VPKK 665
P++
Sbjct: 87 EPRE 90
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 30.3 bits (65), Expect = 5.6
Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 4/152 (2%)
Query: 502 IPSGIRNMMNAGIEQIHYEMHDLDHEAEYREEQKSNVEQVNYCLT-VTTKITSKFNPEVE 560
+ SG+RN + E D + EE N E N +T + T+ K E
Sbjct: 84 VASGVRNQKRKTSRES--EQDDKTFVTQNEEENPENQETFNVIITKINTEDDEKDESRGE 141
Query: 561 AFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSV 620
+ +S P G E ++ + A+ + +E +E+V K + E D
Sbjct: 142 K-VDSSTQTPRGDEESKNQETDGEDKDEASKDEKDEDPKEDVAAKKYEDDQFDEDDDDDK 200
Query: 621 APQAAAANDTEPDTKTAQRKRKIVTENAEEQN 652
D + D K A+++ K + N + +
Sbjct: 201 KDDDDDKTDDDDDKKDAEKEDKDESGNESDSS 232
>SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 546 TVTTKITSKFNPEVEAF--IPASMMFPEGTIEE---IAKDIKEMEAKVAAISQGNELIEE 600
++ ++I+S+ + VE + AS+ F + +E I K +KE +++V + E +E
Sbjct: 53 SMVSQISSRVDDLVEKVSGLKASLEFTQSEVERFGPINKKVKETDSEVVKVKDALEYLEN 112
Query: 601 EVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNE 660
QS + + S P++ + + + K K I T+ E +GRAH+ E
Sbjct: 113 ---------QSRRNNIRVSGIPESPGESWADSEAKV---KEAIQTKLGLEIEIGRAHRVE 160
Query: 661 HVPKK 665
K
Sbjct: 161 RKKAK 165
>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3038
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 536 SNVEQVNYCLTVTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGN 595
S+ VNYCL T ++ NPEV I +M ++++ K E V +S
Sbjct: 1060 SSPSVVNYCLKKTIELKDNTNPEVSDAIVRNMY-----VDDLMKSTDTTENAVKLVSDIR 1114
Query: 596 ELIEE 600
E++++
Sbjct: 1115 EVLDK 1119
>SB_38721| Best HMM Match : Methionine_synt (HMM E-Value=1.5)
Length = 329
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/93 (19%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 564 PASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSV--- 620
P + +G I+E K++K + + +++ + +I+E +++QK Q + D+ ++
Sbjct: 95 PYPLFNKDGRIQEYVKNMKGFKLAMGPVAEVDAVIQENT-ERVQKLQGAVATDRETIDDP 153
Query: 621 -APQAAAANDTEPDTKTAQRKRKIVTENAEEQN 652
P++ E + + ++ EN E +N
Sbjct: 154 NTPESRRQEARERNEERLSEIDELERENRELEN 186
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.9 bits (64), Expect = 7.4
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 558 EVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIE---EEVLQKLQKAQSHIE 614
E E +PA + E +IEE + +E+E+ + E + EEV ++KA + +E
Sbjct: 843 EAEDKVPAEKV--EASIEEAEEPGEEVESLLKEAEAPEEEVGDQVEEVEAPVEKAAASVE 900
Query: 615 HDKTSVAPQAAAANDTEPDTKTAQRK-RKIVTENAE-EQNVGRAHKNEHVPKKIDVAKKE 672
K + A DTE ++ A K T + EQ + E ++ +V ++E
Sbjct: 901 EAKVPMEEAETQAEDTEGTSEEADASVEKAETLVVKMEQAEASVEETESPVEEAEVLEEE 960
Query: 673 VTAGYQYQNA 682
A + + A
Sbjct: 961 AEAPVENEAA 970
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 29.9 bits (64), Expect = 7.4
Identities = 23/121 (19%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 520 EMHDLDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPASMM--FPEGTIEEI 577
++ + + E EY EQK+ +E+ L + + S + +A +P ++ + E+
Sbjct: 318 QLQNKNLELEYEYEQKAKIEKERDKLVIEVERLS--DEMKKAGLPKEVLSLMNDAREEKR 375
Query: 578 AKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTA 637
++++ +ME K++ + + +EE+ ++ + +E +T V ++++E + A
Sbjct: 376 SENLSKMEKKLSETQEKLQDMEEKFSKEKRAWADEVESLETDVKSLQLISDESESKLREA 435
Query: 638 Q 638
Q
Sbjct: 436 Q 436
>SB_57914| Best HMM Match : Ion_trans_2 (HMM E-Value=7.5e-07)
Length = 564
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 28 QSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRINISIDTVSGENLPSEA 81
++N+ +Q A K C+ + + LAD+N +LL+ NI+++ E+ EA
Sbjct: 284 KANKTTSDKQKATKKHCQCESEDDLLLADLNFTLLNETNITLNASQFEHFVREA 337
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 29.9 bits (64), Expect = 7.4
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 504 SGIRNMMNAGIEQIHYEMHDLDHEAEYREEQKSNVEQ-VNYCLTVTTKITS--KFNPEVE 560
S R+ + + +EQ E DL+ R+E+ S++ Q ++ T TK ++ +F ++
Sbjct: 918 SSERHTLASQLEQATRENKDLNSLLRNRDEELSSLRQELSNVSTTGTKASTALEFESKIR 977
Query: 561 AFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEV---LQKLQKAQSHI---- 613
+ A E + + KE+ V+ + +E E+ Q++++A+S +
Sbjct: 978 GSLEARTNHLESELTRAWEHNKELTTAVSNLEANKRHLEVELDRKTQQVRQAESTLQRRQ 1037
Query: 614 -EHDKTSVAPQAAAANDTEPDTKTAQRKRK 642
EH V+ A E + K A +++
Sbjct: 1038 AEHTALVVSKDTAQQQADEAEAKLAALRKE 1067
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 611 SHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTE 646
S++E ++TSV + AND+ D +A RK I TE
Sbjct: 1029 SNVEPNETSVNDKCNGANDSSDDNTSAVRKVDIKTE 1064
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 29.9 bits (64), Expect = 7.4
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 524 LDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPAS--MMFPEGTIEEIAKDI 581
L+ + EE + +++Q+ + + I K VE F + + E TI+ + +
Sbjct: 3038 LERSQKREEELQEDIKQMEDKIAI---IEEKKQEMVEKFWKSQNDLSEAESTIDSLRSEN 3094
Query: 582 KEMEAKVAAISQGNELIEEEVLQKLQKAQSHIE--HDK-TSVAPQAAAANDTEPDTK 635
K+++ K A I+Q E +EE V + ++++ I +DK + Q +D D K
Sbjct: 3095 KDLKNKCALITQRAERLEETVQLEREESEKTIGNWNDKMMELKSQFTRTSDERDDLK 3151
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 317 LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYA 351
L L+++ G+ DKT +++DW RPL + YA
Sbjct: 611 LSELVLQCVGLPLDKTCQVSDWERRPLSQEQMTYA 645
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 29.9 bits (64), Expect = 7.4
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 488 LSCRELPKDAQIFHIPSGIRNMMNAGIEQIHYEMHDL--DHEAEYREEQKSNVEQVNYCL 545
+ R+ K A I H+ + E+I +M + EA +E Q+ + + +
Sbjct: 74 IKARQAAKAAHIKHVQDLANQQIRQTEEKIKQKMEAYRENKEAIEKETQEKLLAKDEHVK 133
Query: 546 TVTTK---ITSKFNPEVEAFIPASMMFPEGTIEEI--AKDIK----EMEAKVAA------ 590
TV + + + + E + + IEE+ AK+ K E +VA
Sbjct: 134 TVQAQAQVMAEEHSKVTEEKLQQKFAASKEIIEELRSAKEEKLQAHERRVRVAQSIAQEQ 193
Query: 591 ISQGNELIEEEVLQKL----QKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQR-KRKIVT 645
I Q ++LIEE+++QK+ +K S++E KT + ++ + Q +RKI+
Sbjct: 194 IEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEEIQMFQRKILE 253
Query: 646 ENAEEQNVGRAHKNEHVPKKIDV 668
E + N V +K+DV
Sbjct: 254 EKLQHXMQNIHIINMVVVRKVDV 276
>SB_58632| Best HMM Match : Flp_Fap (HMM E-Value=1.1)
Length = 297
Score = 29.5 bits (63), Expect = 9.7
Identities = 17/93 (18%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 564 PASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSV--- 620
P + +G+I+E K++K + + +++ + +I+E +++Q+ Q + D+ ++
Sbjct: 95 PYPLFNKDGSIQEYVKNLKGFKLAMGPVAEVDAVIQENT-ERVQELQGAVAADRETIDDP 153
Query: 621 -APQAAAANDTEPDTKTAQRKRKIVTENAEEQN 652
P++ E + + ++ EN E +N
Sbjct: 154 NTPESRRQEARERNEERLSEIDELERENRELEN 186
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.5 bits (63), Expect = 9.7
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPD 633
++ + K++ E K+ +G+E EEE+ KL+ +S+ + +A +A +
Sbjct: 1651 VQSLEKELMETSEKLREDLRGSEKREEELKLKLEAGESNNQAIDKKIAELSAEKQEIIQT 1710
Query: 634 TKTAQRKRKIVTENAEEQ--NVGRAHKNEHVPKKIDVAKK 671
+ A+ KI + Q + ++NE K ++ K
Sbjct: 1711 SAKAEEAFKIQIHELKSQFETTNQTYENELSAAKQELDNK 1750
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 29.5 bits (63), Expect = 9.7
Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEVLQK---LQKAQSHIEHDKTSVAPQAAAANDT 630
++E KD++E + +V + ++EV + +Q+ + ++ KT V +T
Sbjct: 1300 VQETKKDVQETKKEVDETKTKVDETKKEVQETKKDVQETKKEVQETKTKVDETNKEVQET 1359
Query: 631 EPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTA 675
+ + + ++ V E V A E + +KK++TA
Sbjct: 1360 KKEIQETKKDVHEVKGKVSEMAVDLASLKEEFSSRNVNSKKDITA 1404
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.5 bits (63), Expect = 9.7
Identities = 29/148 (19%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 532 EEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAI 591
+++ +++++ C+T N + E + M EEIA+DI +A
Sbjct: 134 KKKVKEIKEIDNCVTEKKNKEMARNDQQETTVETGMRGDNVKKEEIAEDI------IAKF 187
Query: 592 SQGNELIEEEVLQKLQKA---QSHIEHDK----TSVAPQAAAANDTEPDTKTAQRKRKIV 644
S+GN+ +EE+V ++ E DK + ++ + A E + K ++
Sbjct: 188 SEGNQ-VEEKVKKRRSFGIFKDKDKEKDKEKAGSVISLETADFEKEEAADEILVEKTEVK 246
Query: 645 TENAEEQNVGRAHKNEHVPKKIDVAKKE 672
+ +++ ++K ++ K++DV++ E
Sbjct: 247 EKKQQKRKFSFSNKKKNKEKEMDVSESE 274
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 29.5 bits (63), Expect = 9.7
Identities = 50/236 (21%), Positives = 89/236 (37%), Gaps = 18/236 (7%)
Query: 436 RQLDE-STTYLLPN-HMLLSLSENLPRELQGVNACCDPMPPF-VKQNVITIHRMILSCRE 492
R L+E LL N H L EL GV + + VK+ I + R RE
Sbjct: 732 RHLEEVEIKELLENAHQQREAFNALKTELTGVTTKLEEVEKVSVKELEIELDRKNTRNRE 791
Query: 493 LPKD-----AQIFHIPSGIRNMMNAGIEQIHYEMHDLDHE-AEYREEQKSNVEQVNYCLT 546
L K+ ++ + R + ++Q +L+ E A+ + E + V Q L
Sbjct: 792 LEKELSKLNTKLDAVEDSHRRELELRVQQKSVRNTELELEVAKMKIENRQLVTQ----LK 847
Query: 547 VTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKL 606
T ++ EVE I ++E+ ++E A + Q + +E+
Sbjct: 848 AKTSHNTELQQEVEVLIKKLANVENNQVKELRDWVREKNEHNAKLEQQVAQLTKEIAGLE 907
Query: 607 QKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHV 662
+ + H+E +KT ++ E + K+ +V + E+N E V
Sbjct: 908 ETRRKHLEAEKTK-----SSIVSLERKLEEVCNKKNVVEKLLREKNASCTDLQEEV 958
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 9.7
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 571 EGTIEEIAKDIK-EMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAAND 629
+G +E++ ++ + EME + + E +E+E +KL K + +IE S+ + + D
Sbjct: 1132 KGELEDLLQESRVEMETLIEKQDEFRESLEQEYQRKLHKEKQNIESTLESLRQEISRLRD 1191
Query: 630 TEPDTKT 636
+T
Sbjct: 1192 HRKQLQT 1198
>SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)
Length = 405
Score = 29.5 bits (63), Expect = 9.7
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 599 EEEVLQKLQ-KAQSHIEHDKTSVAPQAAAANDTEPDTK-------TAQRKRKIVTENAEE 650
E +KLQ KA S I KTS P A N +P K A K + E E
Sbjct: 324 ESRKAEKLQEKADSIISTPKTSAVPSPATPNPDDPPPKKRPGRPSNAMIKEQREREERER 383
Query: 651 QNVGRAHKNEHVPKK 665
+ AH PKK
Sbjct: 384 EKAELAHHATPSPKK 398
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.5 bits (63), Expect = 9.7
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 594 GNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNV 653
G +L + + LQ+ Q +H K+++ P+A A+ T D A + E V
Sbjct: 2378 GQQLYQMQ-LQQQQILMQQQQHPKSTIHPEAEASQQTIKDQNLAAK------ETLSNSTV 2430
Query: 654 GRAHKNEHVPKKIDVAKKEVTAG 676
A K + VP K D A++E G
Sbjct: 2431 CGADKEKLVPVKCD-AEEEAKEG 2452
>SB_40824| Best HMM Match : His_leader (HMM E-Value=3.1)
Length = 456
Score = 29.5 bits (63), Expect = 9.7
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 224 AVDVEHHSYRTYQGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHG 281
A ++HH Y IT + G II + R H H N++ T K HG
Sbjct: 323 AASLQHH-YHHRNIITTSVSSQKHHHGISIITGTSPRHHYHHRNIITTSVSSQKHHHG 379
>SB_25756| Best HMM Match : Secretogranin_V (HMM E-Value=7.3)
Length = 216
Score = 29.5 bits (63), Expect = 9.7
Identities = 17/73 (23%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 607 QKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVG-RAH---KNEHV 662
+ Q+ + H S++ + + + + P T + ++RK+ +E +++QN G R++ +N V
Sbjct: 44 ESLQNQLLHGTPSISIEPPS-DGSRPSTSSPPKERKVKSEQSKKQNKGVRSNYLSENAAV 102
Query: 663 PKKIDVAKKEVTA 675
K ID ++ + +
Sbjct: 103 AKTIDSGRQNIVS 115
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.5 bits (63), Expect = 9.7
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 456 ENLPRELQGVNACCDPMPPFVKQNVITIHRMILSCRELPKDAQIFHIPSGIRNMMNAGIE 515
E+L REL VNA D + K V I+ + EL I + + + +
Sbjct: 241 ESLRRELVSVNAKNDLLNQEKKDLVKKINDLKKRITELEL---IINTLKDEKEALEQDVN 297
Query: 516 QIHYEMHDLDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPASMMFPEGTIE 575
+ Y++ +L+ + + E++K+ ++ + L + + E+ + + E E
Sbjct: 298 SMSYKISNLETKVKNLEKEKAFYQKESEELEAKNR---RMKNEILQ-LQNQLKDKERMCE 353
Query: 576 EIAKDIKEMEAKVAAISQGNELIEEEV-LQKLQKAQS 611
+A + K++EA A+ + + +E+E+ L K+Q S
Sbjct: 354 NLAAEAKQLEASNNALKRDKKALEDEINLLKMQLESS 390
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.132 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,392,906
Number of Sequences: 59808
Number of extensions: 921927
Number of successful extensions: 3584
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 3511
Number of HSP's gapped (non-prelim): 113
length of query: 709
length of database: 16,821,457
effective HSP length: 87
effective length of query: 622
effective length of database: 11,618,161
effective search space: 7226496142
effective search space used: 7226496142
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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