Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000626-TA|BGIBMGA000626-PA|IPR002562|3'-5' exonuclease,
IPR002121|HRDC, IPR012588|PMC2NT, IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold
(709 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 292 5e-79
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 292 5e-79
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 137 3e-32
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 38 0.024
Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical pr... 34 0.30
AL117195-10|CAB55016.2| 710|Caenorhabditis elegans Hypothetical... 34 0.40
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 34 0.40
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 33 0.52
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 33 0.69
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 33 0.69
Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical pr... 33 0.92
Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical pr... 33 0.92
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 32 1.2
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 32 1.2
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 32 1.2
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 32 1.2
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 32 1.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 1.2
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 32 1.2
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 32 1.2
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 32 1.2
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 32 1.2
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 31 2.8
X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic int... 31 2.8
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 31 2.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 2.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 2.8
AF099919-7|AAC68795.1| 156|Caenorhabditis elegans Hypothetical ... 31 2.8
AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate... 31 2.8
Z81479-9|CAB03937.1| 1117|Caenorhabditis elegans Hypothetical pr... 31 3.7
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 31 3.7
U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical pr... 31 3.7
Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical pr... 30 4.9
Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical pr... 30 4.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 4.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 4.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 4.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 4.9
Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical pr... 30 6.5
Z29095-6|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 30 6.5
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 30 6.5
U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical pr... 30 6.5
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 30 6.5
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 30 6.5
Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 29 8.5
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 29 8.5
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 29 8.5
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Hypothetical ... 29 8.5
AF016448-7|AAW30664.1| 1084|Caenorhabditis elegans Hypothetical ... 29 8.5
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 29 8.5
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 292 bits (717), Expect = 5e-79
Identities = 186/521 (35%), Positives = 283/521 (54%), Gaps = 40/521 (7%)
Query: 3 SSYDLFKTYPEFNEISNQISQNVAQQSNEL---IGTEQ--PAVKLKCEDFTS-------N 50
+ Y+L+ +YP FN + Q + N++ IG P V E +T N
Sbjct: 55 ADYELYNSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRVPDVGSSVEHYTECVIEAQDN 114
Query: 51 I-EKLADVNDSL----LD---RINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 102
I E+ A ++++L LD ++ I + N +EA S S N
Sbjct: 115 IAERAATLHEALKKAELDEIVKVPEFITKAAPTNRKTEAEVSAAMRTFSANIGTVLAEKF 174
Query: 103 SEKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYT--EKG 160
E++ + + + +PQ T+ + DNS+ + K++ K + I+ +L+ E G
Sbjct: 175 RERREEAAQMVV---LEKPQKTYNISSDNSQAPFSSKLTVKHHAIEKRTGIVLHDDDESG 231
Query: 161 EA--------VGYEHPYQMELDMYNPPSQFIDXXXXXXXXXXXXXXTKFTYIDIESKLDE 212
EHPY E+ + P + T T ID + KL+
Sbjct: 232 RRDWISAETETEEEHPYIAEILHFKVPEAQLKSAECLKFTALKD--TPLTMIDTKEKLEA 289
Query: 213 LVEHLMAVEQIAVDVEHHSYRTYQGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTD 272
L + L +V++ AVD+EHH R+Y G+TCLIQIST + DFIID + +H+ LN F +
Sbjct: 290 LTKTLNSVKEFAVDLEHHQMRSYLGLTCLIQISTRDE-DFIIDPFPIWDHVGMLNEPFAN 348
Query: 273 PKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKT 332
P+ LKVFHG+DSDVLWLQRD+GV++V LFDTY A K L P SL +L +++ V DK
Sbjct: 349 PRILKVFHGSDSDVLWLQRDYGVHVVNLFDTYVAMKKLKYPKFSLAYLTLRFADVVLDKQ 408
Query: 333 YRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCA 392
Y+LADWR RPL + +I YAR DTHYLLY + +++ Q+++++ T L +V+ +S C
Sbjct: 409 YQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLKQD---TKDLANVYSESSDLCI 465
Query: 393 STYNKEVIHDESHIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLL 452
Y K V + + ++ I+ + + +Q AL L+KWRD AR DES ++LPNHM+L
Sbjct: 466 KVYKKPVFNPKGYL-TEIKFRFTLNTRQDYALTHLFKWRDVVARAEDESPHFVLPNHMML 524
Query: 453 SLSENLPRELQGVNACCDPMPPFVKQNVITIHRMILSCREL 493
SLSE LPR++ G+ ACC+P+P FVKQ I ++I+ R++
Sbjct: 525 SLSETLPRDVGGIYACCNPLPYFVKQRTGDILKIIVEARDV 565
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 292 bits (717), Expect = 5e-79
Identities = 186/521 (35%), Positives = 283/521 (54%), Gaps = 40/521 (7%)
Query: 3 SSYDLFKTYPEFNEISNQISQNVAQQSNEL---IGTEQ--PAVKLKCEDFTS-------N 50
+ Y+L+ +YP FN + Q + N++ IG P V E +T N
Sbjct: 55 ADYELYNSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRVPDVGSSVEHYTECVIEAQDN 114
Query: 51 I-EKLADVNDSL----LD---RINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 102
I E+ A ++++L LD ++ I + N +EA S S N
Sbjct: 115 IAERAATLHEALKKAELDEIVKVPEFITKAAPTNRKTEAEVSAAMRTFSANIGTVLAEKF 174
Query: 103 SEKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYT--EKG 160
E++ + + + +PQ T+ + DNS+ + K++ K + I+ +L+ E G
Sbjct: 175 RERREEAAQMVV---LEKPQKTYNISSDNSQAPFSSKLTVKHHAIEKRTGIVLHDDDESG 231
Query: 161 EA--------VGYEHPYQMELDMYNPPSQFIDXXXXXXXXXXXXXXTKFTYIDIESKLDE 212
EHPY E+ + P + T T ID + KL+
Sbjct: 232 RRDWISAETETEEEHPYIAEILHFKVPEAQLKSAECLKFTALKD--TPLTMIDTKEKLEA 289
Query: 213 LVEHLMAVEQIAVDVEHHSYRTYQGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTD 272
L + L +V++ AVD+EHH R+Y G+TCLIQIST + DFIID + +H+ LN F +
Sbjct: 290 LTKTLNSVKEFAVDLEHHQMRSYLGLTCLIQISTRDE-DFIIDPFPIWDHVGMLNEPFAN 348
Query: 273 PKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKT 332
P+ LKVFHG+DSDVLWLQRD+GV++V LFDTY A K L P SL +L +++ V DK
Sbjct: 349 PRILKVFHGSDSDVLWLQRDYGVHVVNLFDTYVAMKKLKYPKFSLAYLTLRFADVVLDKQ 408
Query: 333 YRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCA 392
Y+LADWR RPL + +I YAR DTHYLLY + +++ Q+++++ T L +V+ +S C
Sbjct: 409 YQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLKQD---TKDLANVYSESSDLCI 465
Query: 393 STYNKEVIHDESHIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLL 452
Y K V + + ++ I+ + + +Q AL L+KWRD AR DES ++LPNHM+L
Sbjct: 466 KVYKKPVFNPKGYL-TEIKFRFTLNTRQDYALTHLFKWRDVVARAEDESPHFVLPNHMML 524
Query: 453 SLSENLPRELQGVNACCDPMPPFVKQNVITIHRMILSCREL 493
SLSE LPR++ G+ ACC+P+P FVKQ I ++I+ R++
Sbjct: 525 SLSETLPRDVGGIYACCNPLPYFVKQRTGDILKIIVEARDV 565
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 137 bits (331), Expect = 3e-32
Identities = 109/338 (32%), Positives = 165/338 (48%), Gaps = 36/338 (10%)
Query: 3 SSYDLFKTYPEFNEISNQISQNVAQQSNEL---IGTEQ--PAVKLKCEDFTS-------N 50
+ Y+L+ +YP FN + Q + N++ IG P V E +T N
Sbjct: 55 ADYELYNSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRVPDVGSSVEHYTECVIEAQDN 114
Query: 51 I-EKLADVNDSL----LD---RINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 102
I E+ A ++++L LD ++ I + N +EA S S N
Sbjct: 115 IAERAATLHEALKKAELDEIVKVPEFITKAAPTNRKTEAEVSAAMRTFSANIGTVLAEKF 174
Query: 103 SEKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYT--EKG 160
E++ + + + +PQ T+ + DNS+ + K++ K + I+ +L+ E G
Sbjct: 175 RERREEAAQMVV---LEKPQKTYNISSDNSQAPFSSKLTVKHHAIEKRTGIVLHDDDESG 231
Query: 161 EA--------VGYEHPYQMELDMYNPPSQFIDXXXXXXXXXXXXXXTKFTYIDIESKLDE 212
EHPY E+ + P + T T ID + KL+
Sbjct: 232 RRDWISAETETEEEHPYIAEILHFKVPEAQLKSAECLKFTALKD--TPLTMIDTKEKLEA 289
Query: 213 LVEHLMAVEQIAVDVEHHSYRTYQGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTD 272
L + L +V++ AVD+EHH R+Y G+TCLIQIST + DFIID + +H+ LN F +
Sbjct: 290 LTKTLNSVKEFAVDLEHHQMRSYLGLTCLIQISTRDE-DFIIDPFPIWDHVGMLNEPFAN 348
Query: 273 PKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSL 310
P+ LKVFHG+DSDVLWLQRD+GV++V LFDTY K L
Sbjct: 349 PRILKVFHGSDSDVLWLQRDYGVHVVNLFDTYVKVKKL 386
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
a protein.
Length = 1281
Score = 37.9 bits (84), Expect = 0.024
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 546 TVTTKITSKFNPEVEAFIPA-SMMFPEGTIEEIA-KDIKEMEAKVAAISQGNEL-IEEEV 602
TVT+ S+ + FI A + + +G IE IA K KE +S+ +E E E
Sbjct: 123 TVTSAAYSQEMESINIFIKARNFLVYQGAIENIAMKTPKERTQLFEELSRSHEFQAEYER 182
Query: 603 LQ-KLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEH 661
L+ ++ KA+ +H+ A + + + A++ + + E A + + H+ H
Sbjct: 183 LKVEMTKAEDDTQHNMNKRRGIAQEKREAKMEKDEAEKYQTMKNELAAKSTMLFLHQLFH 242
Query: 662 VPKKIDVAKKEVTA 675
+ ID +K+E+ A
Sbjct: 243 CERTIDESKEEINA 256
>Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical
protein ZK1098.8 protein.
Length = 910
Score = 34.3 bits (75), Expect = 0.30
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 310 LGLPALSLKFL-LMKYC-GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKN 367
L LP + K L Y G++ DKT + ++W+ RPL I YA +D ++ ++ + +
Sbjct: 543 LELPKKTFKLADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAVVVVETFKKILS 602
Query: 368 QIIEKN 373
+ EKN
Sbjct: 603 IVEEKN 608
>AL117195-10|CAB55016.2| 710|Caenorhabditis elegans Hypothetical
protein Y57A10A.13 protein.
Length = 710
Score = 33.9 bits (74), Expect = 0.40
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 317 LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVW 362
L F+ K G DKT + + W RPL + ++YA MD + +L ++
Sbjct: 629 LSFICEKLLGRPLDKTEQCSVWDRRPLRCLQLRYAAMDAYCMLLLY 674
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 33.9 bits (74), Expect = 0.40
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 524 LDHEAEYREEQKSNV-EQVNYCLTVTTKITSKFNPEVEA----FIPASMMFPEGTIEEIA 578
LD E +E + + E+ + + ++ S+ N EA F + PE +E
Sbjct: 4 LDDFLEMLDELPAELKERSDEIRRIDNEVESRLNRNREAINDFFERTGVNMPEEQRKERC 63
Query: 579 KDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAAN 628
K ++E + + ++Q LI E++ + L+K + H+E +KT+ + A N
Sbjct: 64 KVLQEEFSTIRVLAQRKYLIAEKMQELLKKYKVHLEKEKTTFQCEMEADN 113
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 33.5 bits (73), Expect = 0.52
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 362 WRVMKNQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIH-DESHIPLYIRSKKNFDN-- 418
W+++ Q + K+ G NM+ ++ S QT S+ N+ V+ D LY R++ FDN
Sbjct: 166 WKIL--QFLLKDTGNMNMMNNLTV-SLQTKDSSANEYVVSLDNQRDKLYRRNR--FDNLM 220
Query: 419 QQMAALKMLYKWRDSQARQLD 439
Q A +ML++ +DS+ +
Sbjct: 221 HQQCAFEMLFRPKDSEVNSFE 241
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 33.1 bits (72), Expect = 0.69
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 596 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTE--PDTKTAQRKRKIVTENAEEQNV 653
E I++E+ + +Q A ++ V P A E + K R +E
Sbjct: 61 EEIKKELGEPIQVATDNVRRSDRQVKPSAKMVLVAECAKEIKFDVRDEDQAYNFDDEPEE 120
Query: 654 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 685
G + N +VP + V K++ Y Y +T D
Sbjct: 121 GTSSSNSYVPTNVKVVKRKTPTMYAYSGSTID 152
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 33.1 bits (72), Expect = 0.69
Identities = 45/216 (20%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 451 LLSLSENLPRELQGV-NACCDPMPPFVKQNVITIHRMILSCRELPKDAQIFHIPSGIRNM 509
+++L E L + + N D P ++ ++I I ++I+ L + +I +PS I N
Sbjct: 5 IINLKEKLFKTSNDLFNKIDDTANPLLQTDLINIDQLIIKLSNL--EQKIGKVPSYIENR 62
Query: 510 MNAGIEQIHYEMHDLDHEAEYREEQKSNVEQ--VNYCLTV---TTKITSK---FNPEVEA 561
N H +M+++ EAE +E ++ +V+Q +N V T++ S +P E
Sbjct: 63 FNLPKFINHPQMNEMKAEAE-KEIERLDVDQTLMNIKKDVEMFKTELASHNYIISPPDED 121
Query: 562 FIPASMMFPEGTI--EEIAKDIKEMEAKVAAISQGNEL--IEEEVLQKLQ--KAQSHIEH 615
+ + + + ++ ++ + +I NE+ +E ++ +++ KA+ ++
Sbjct: 122 VVLTEIEDDDLEVNRDQSLRNSSNYHSATFSIYNTNEIPNLENDLRAEVEKLKAELALKD 181
Query: 616 DKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQ 651
+ A QA+ AN+ + KR I+ ++Q
Sbjct: 182 ENLKKAEQASKANEKVSKDLSETEKRSIIQSGRDDQ 217
>Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 32.7 bits (71), Expect = 0.92
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 573 TIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAP----QAAAAN 628
T E + +KEM ++ + E E + K+++ +HDK VA AA
Sbjct: 114 TTREHDQKMKEMRSETREAQEKAERNHREKMSKIKE-----DHDKERVAALQKIDAAKKE 168
Query: 629 DTEPDTKTAQRKRKIVTENAEEQNVGRAHKN-EHVPKKIDVAKKEV 673
E K+KIV E A+E N HKN E + K+ ++E+
Sbjct: 169 GAEMIALVEMEKQKIVRERADEMN--EHHKNMETMTKEYHQKREEI 212
>Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 32.7 bits (71), Expect = 0.92
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 573 TIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAP----QAAAAN 628
T E + +KEM ++ + E E + K+++ +HDK VA AA
Sbjct: 114 TTREHDQKMKEMRSETREAQEKAERNHREKMSKIKE-----DHDKERVAALQKIDAAKKE 168
Query: 629 DTEPDTKTAQRKRKIVTENAEEQNVGRAHKN-EHVPKKIDVAKKEV 673
E K+KIV E A+E N HKN E + K+ ++E+
Sbjct: 169 GAEMIALVEMEKQKIVRERADEMN--EHHKNMETMTKEYHQKREEI 212
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 577 IAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKT 636
I +K ++ VA + + +L++++ ++ +K ++ +E V + A D + D KT
Sbjct: 118 IGMSMKTKKSTVADVRERFKLMKDK--KEREKKEAQVEQLLEDVQEEEARMADFKKDKKT 175
Query: 637 AQRKRKIVTENAEEQN 652
RKRK T EE++
Sbjct: 176 DNRKRKRDTRKDEEED 191
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEV----------LQKLQKAQSHIEHDK--TSVA 621
+EE K ++E EA+VA++++ L+EEE+ +KL++A +++ + V
Sbjct: 71 LEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVM 130
Query: 622 PQAAAANDTEPDTKTAQRKR-KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAG 676
+ ++ +T AQ K +++ E A+ + A K V ++ A++ AG
Sbjct: 131 ENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAG 186
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEV----------LQKLQKAQSHIEHDK--TSVA 621
+EE K ++E EA+VA++++ L+EEE+ +KL++A +++ + V
Sbjct: 71 LEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVM 130
Query: 622 PQAAAANDTEPDTKTAQRKR-KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAG 676
+ ++ +T AQ K +++ E A+ + A K V ++ A++ AG
Sbjct: 131 ENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAG 186
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEV----------LQKLQKAQSHIEHDK--TSVA 621
+EE K ++E EA+VA++++ L+EEE+ +KL++A +++ + V
Sbjct: 71 LEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVM 130
Query: 622 PQAAAANDTEPDTKTAQRKR-KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAG 676
+ ++ +T AQ K +++ E A+ + A K V ++ A++ AG
Sbjct: 131 ENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAG 186
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEV----------LQKLQKAQSHIEHDK--TSVA 621
+EE K ++E EA+VA++++ L+EEE+ +KL++A +++ + V
Sbjct: 71 LEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVM 130
Query: 622 PQAAAANDTEPDTKTAQRKR-KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAG 676
+ ++ +T AQ K +++ E A+ + A K V ++ A++ AG
Sbjct: 131 ENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAG 186
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 1.2
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 557 PEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHD 616
PE E + + PE +E K+ + K + E EEE L L + +
Sbjct: 74 PEPEPEVKKAAKVPEKPEKE-----KKEKKKAGKKGKKGEADEEEDLDALLASFQEKDGP 128
Query: 617 KTS-VAPQAAAANDTEP-DTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKE 672
K + VAP+A AA + P D K +++K++ E EE V E K D K+
Sbjct: 129 KVAEVAPEAVAAPEAAPVDDKKSKKKKEKPVEKPEEPAVEEDSDGEGDEKDQDKKDKK 186
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEV----------LQKLQKAQSHIEHDK--TSVA 621
+EE K ++E EA+VA++++ L+EEE+ +KL++A +++ + V
Sbjct: 71 LEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVM 130
Query: 622 PQAAAANDTEPDTKTAQRKR-KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAG 676
+ ++ +T AQ K +++ E A+ + A K V ++ A++ AG
Sbjct: 131 ENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAG 186
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 574 IEEIAKDIKEMEAKVAAISQGNELIEEEV----------LQKLQKAQSHIEHDK--TSVA 621
+EE K ++E EA+VA++++ L+EEE+ +KL++A +++ + V
Sbjct: 71 LEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVM 130
Query: 622 PQAAAANDTEPDTKTAQRKR-KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAG 676
+ ++ +T AQ K +++ E A+ + A K V ++ A++ AG
Sbjct: 131 ENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAG 186
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 32.3 bits (70), Expect = 1.2
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 603 LQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHV 662
+QKLQK Q H D + A+ + D + + K + + N+ + E +
Sbjct: 1 MQKLQK-QVHALIDTANNIEDTGVASAYDADFEKMEETLKETKKALSDANISK-EDIEEM 58
Query: 663 PKKIDVAKKEVTAGYQYQNATYDKFYNVT 691
KK+ + KK+V AG + A + N+T
Sbjct: 59 SKKLALLKKQVIAGREKLGAIETRISNIT 87
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 32.3 bits (70), Expect = 1.2
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 557 PEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHD 616
PE E + + PE +E K+ + K + E EEE L L + +
Sbjct: 74 PEPEPEVKKAAKVPEKPEKE-----KKEKKKAGKKGKKGEADEEEDLDALLASFQEKDGP 128
Query: 617 KTS-VAPQAAAANDTEP-DTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKIDVAKKE 672
K + VAP+A AA + P D K +++K++ E EE V E K D K+
Sbjct: 129 KVAEVAPEAVAAPEAAPVDDKKSKKKKEKPVEKPEEPAVEEDSDGEGDEKDQDKKDKK 186
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 31.5 bits (68), Expect = 2.1
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 575 EEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDT 634
E+ K + ++ + N E V++K ++ + + K A + + +
Sbjct: 38 EDKTKAMSAIKTTTMGSTTANMHPAEPVVEKKEEPKEKVPEKKEEEKKDATKKEEAKEEK 97
Query: 635 KTAQRK--RKIVTENAEEQNVGRAHKNEHVPKKIDVAKKE 672
K +RK +K ++ E++N G KN KK + KK+
Sbjct: 98 KEEERKEEKKEESKEGEKKNSGEEKKNSGDEKKEEGGKKD 137
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.1
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 571 EGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDT 630
+G E+ + E KVA +S ++ V Q A IE K ++A Q A
Sbjct: 807 KGQEHEMDGQLIEARRKVAEMSNRLSIVTSSV----QSAAPAIETLKKTIANQEKEAAKV 862
Query: 631 EPDTKTAQRKRKIVTE 646
+ D KT + K+KIV E
Sbjct: 863 KVDAKTLEDKQKIVEE 878
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 31.1 bits (67), Expect = 2.8
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 570 PEGTIEEIAK--DIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAA 627
P + E +K +++ + K AA SQ + QKL A+ +E K V+P+ +
Sbjct: 13 PPASFSETSKVQNVQNTQPKPAAPSQMSIDESHSKNQKLPSAEKSVEECKKPVSPEKKKS 72
Query: 628 NDTEPDTKTAQRKRKIVTENAEE------QNVGRAHKNEHVPKKIDVAKKE 672
K + K+K + +E + +A NE + K + +AKKE
Sbjct: 73 PIKVLSEKKLKSKKKEEDKEPDEKVEKDVKKEVKADNNEPLVKNLKIAKKE 123
>X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 500
Score = 31.1 bits (67), Expect = 2.8
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 581 IKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHD----KTSVAPQAAAANDTEPDTK- 635
+ E+EA++A ++ ++EE+VL ++++ I++D + + + A N+ +
Sbjct: 142 LAEVEAQIALFNRKIRIVEEDVL-RIRRETGGIQNDIGRIHSQIHAEIALKNERHHSVQM 200
Query: 636 TAQRKRKIVTENAE--EQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 685
QR + I TEN+ EQ + H++ + + D ++E+ A + A Y+
Sbjct: 201 LLQRVQVIQTENSSRIEQELIYIHRDTTLENR-DYFRQELQAAMRDIRANYE 251
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 490 CRELPKDAQIFHIPSGIRNMMNAGIEQIHYEMHDLDHEAEYREEQKSNVEQVNYCLT-VT 548
CR L ++ + H + + +N IE++ E L+HE + NV V ++ +
Sbjct: 986 CRRLSREREQQHEYAKVMRDVNEKIEKLQLEKDALEHELKMMSSNNENVPPVGTSVSGMP 1045
Query: 549 TKITSKFNPEVEAFIPASMMFPEGT--IEEIAKDIKE 583
TK +++ + P + E T ++ I + +K+
Sbjct: 1046 TKTSNQKCAQPHYTSPTRQLLHESTMAVDAIVQKLKK 1082
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 2.8
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 571 EGTIEEIA-KDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAAND 629
E T E + K K++ K A ++G E ++E V +KL+K ++ + S A++D
Sbjct: 15067 ESTTEAVEEKKTKKVVKKKVAENKGEETLQE-VKEKLKKGKAVEKVQDESRRGSLQASSD 15125
Query: 630 TEPDTKTAQRKRKIVTENAEEQN 652
E T T++++ + E E++
Sbjct: 15126 NESVTTTSEKRSEAELEKNSEKS 15148
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 2.8
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 571 EGTIEEIA-KDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAAND 629
E T E + K K++ K A ++G E ++E V +KL+K ++ + S A++D
Sbjct: 15067 ESTTEAVEEKKTKKVVKKKVAENKGEETLQE-VKEKLKKGKAVEKVQDESRRGSLQASSD 15125
Query: 630 TEPDTKTAQRKRKIVTENAEEQN 652
E T T++++ + E E++
Sbjct: 15126 NESVTTTSEKRSEAELEKNSEKS 15148
>AF099919-7|AAC68795.1| 156|Caenorhabditis elegans Hypothetical
protein F40G9.6 protein.
Length = 156
Score = 31.1 bits (67), Expect = 2.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 25 VAQQSNELIGTEQPAVKLKCEDFTSNIEK-LADVNDSLLDRINISIDTV 72
V Q+ N+L GT+ A+K E+ N+EK + + DS + + D V
Sbjct: 24 VLQEQNQLFGTKLSALKTAIEEIHENVEKIMGNFTDSEKSDVGKTFDNV 72
>AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate
filament, c protein 1 protein.
Length = 500
Score = 31.1 bits (67), Expect = 2.8
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 581 IKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHD----KTSVAPQAAAANDTEPDTK- 635
+ E+EA++A ++ ++EE+VL ++++ I++D + + + A N+ +
Sbjct: 142 LAEVEAQIALFNRKIRIVEEDVL-RIRRETGGIQNDIGRIHSQIHAEIALKNERHHSVQM 200
Query: 636 TAQRKRKIVTENAE--EQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 685
QR + I TEN+ EQ + H++ + + D ++E+ A + A Y+
Sbjct: 201 LLQRVQVIQTENSSRIEQELIYIHRDTTLENR-DYFRQELQAAMRDIRANYE 251
>Z81479-9|CAB03937.1| 1117|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1117
Score = 30.7 bits (66), Expect = 3.7
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 506 IRNMMNAGIEQIHYEMHDLDHEAEYREEQKSNVEQVNYCLTVTTKITSKFNPEVEAFIPA 565
+R M+N + H+ + + ++E YR K Y + + K + F+ ++EA +
Sbjct: 787 VRMMLNGELFSEHF-VTESENETNYRHVLKYLDPNTEYLINIAAKNSVGFSEKIEAVVKT 845
Query: 566 SMMFPEGTIEEIAKDIKEMEAKV--AAISQGNELIEEEVLQKLQK 608
+ P TI +I D + K+ ++ GN ++ + L K+ K
Sbjct: 846 VPLCP--TIPKIWCDCEATALKIHWDRVTSGNSMMYK--LMKINK 886
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical
protein C33D9.6 protein.
Length = 485
Score = 30.7 bits (66), Expect = 3.7
Identities = 28/163 (17%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 514 IEQIHYEMHDLDHEAEYREEQKSNVEQVNYCLT--VTTKITSKFNPEVEAFIPASMMFPE 571
I++ + DL+ E +E++ ++ E+ Y T +T K + + + + +
Sbjct: 172 IQRCMKRVEDLESILETKEQKLNDFEEREYETTCQLTMKHSLELAEKDQKILELEKYIRN 231
Query: 572 GTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTE 631
+++ +E+E + ++ ++ + K+ AQ +E + + + A ++
Sbjct: 232 NENQDVVALTRELERLRSQATKDEPSTDDSTI-KISMAQHRLELEAQAKMIKTLEAELSK 290
Query: 632 PDTKTAQRKRKIVTE-NAEEQNVGRAHKNEHVPKKIDVAKKEV 673
A++ +++ E N+E +N+ R E K + +AK E+
Sbjct: 291 RQEINAEQIERLIEERNSEIKNLIREQSKEIHEKNVKIAKFEI 333
>U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical
protein B0034.4 protein.
Length = 216
Score = 30.7 bits (66), Expect = 3.7
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 586 AKVAAISQGNELIEEEVLQKLQKAQSHIEHDK----TSVAPQAAAANDTEPDTKTAQRKR 641
AK AA+ + E +++ ++ Q+ + DK +++ P +N T P T ++++
Sbjct: 29 AKPAAVKKAVE--DKQPVKVTAFEQASLNEDKAEAMSNIEPSPKISNSTVPTAPTPKKEK 86
Query: 642 KIV-TENAEEQNV--GRAHKNEHV--PKKIDVAKKEVTAGYQYQN 681
K+V T E++V G +EH+ KK+ K + G Y N
Sbjct: 87 KVVATTKKTERSVAQGPPLVSEHIKDEKKMPSVHKPIRKGSIYAN 131
>Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical
protein C41G7.3 protein.
Length = 553
Score = 30.3 bits (65), Expect = 4.9
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Query: 150 LALNILYTEKGEAVGYEHPYQMELDMYNPPSQFIDXXXXXXXXXXXXXXTKFTYIDIESK 209
L +NI T++ +GY + Y E+ + PP+ F++ T T ++
Sbjct: 141 LEMNIPPTQRTTRMGYTNSYNPEIRTHLPPNSFLNSVFPMGEPNAILTSTPPTTSIMDEP 200
Query: 210 L--DELVEHLMAVEQIAVDVEHHSYRTYQGI----TCLIQ-----ISTDEGGDFIIDALA 258
L L +HL+ +V S + TC+++ I T E G + + A
Sbjct: 201 LLSASLEKHLLFPSDFSVPPPRLSPVQELPLTPPKTCVVEKIKQWIPTTEVGKILGNRAA 260
Query: 259 VREHIHK-LNVVFTDPKKLKVFHGA 282
V++HI + N V T +++ GA
Sbjct: 261 VKKHIERQFNCVITVHTEVQSSFGA 285
>Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical
protein K08F8.4 protein.
Length = 457
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 14 FNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRINISIDTVS 73
+NE++ +N Q+ N + P ++ C I +L DV+D L D +I V+
Sbjct: 191 YNELTVMYPKNACQEFNYIF----PLLQQNCGFGPDRIPQLQDVSDFLKDCTGYTIRPVA 246
Query: 74 GENLPSEAFASGLNDNPSHNS 94
G L S F +GL H++
Sbjct: 247 G-LLSSRDFLAGLAFRVFHST 266
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 4.9
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 547 VTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKL 606
+ + + + +PE PAS E + E+ A K+ E +V + ++ + E+ V+++L
Sbjct: 1557 IKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEEL 1616
Query: 607 QKAQSHIEHDKTSVAPQAAAANDTEP------DTKTAQRKRKIVTENAEEQNVGRAHKNE 660
K+ +K P++ + P D K+ +K K E EE+ K
Sbjct: 1617 -KSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEK-SPEKVEEKPTSPTKKES 1674
Query: 661 HVPKKIDVAKKEVT 674
KK D K T
Sbjct: 1675 SPTKKTDDEVKSPT 1688
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 4.9
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 547 VTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKL 606
+ + + + +PE PAS E + E+ A K+ E +V + ++ + E+ V+++L
Sbjct: 1557 IKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEEL 1616
Query: 607 QKAQSHIEHDKTSVAPQAAAANDTEP------DTKTAQRKRKIVTENAEEQNVGRAHKNE 660
K+ +K P++ + P D K+ +K K E EE+ K
Sbjct: 1617 -KSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEK-SPEKVEEKPTSPTKKES 1674
Query: 661 HVPKKIDVAKKEVT 674
KK D K T
Sbjct: 1675 SPTKKTDDEVKSPT 1688
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 4.9
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 547 VTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKL 606
+ + + + +PE PAS E + E+ A K+ E +V + ++ + E+ V+++L
Sbjct: 1557 IKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEEL 1616
Query: 607 QKAQSHIEHDKTSVAPQAAAANDTEP------DTKTAQRKRKIVTENAEEQNVGRAHKNE 660
K+ +K P++ + P D K+ +K K E EE+ K
Sbjct: 1617 -KSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEK-SPEKVEEKPTSPTKKES 1674
Query: 661 HVPKKIDVAKKEVT 674
KK D K T
Sbjct: 1675 SPTKKTDDEVKSPT 1688
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 4.9
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 547 VTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKL 606
+ + + + +PE PAS E + E+ A K+ E +V + ++ + E+ V+++L
Sbjct: 1557 IKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEEL 1616
Query: 607 QKAQSHIEHDKTSVAPQAAAANDTEP------DTKTAQRKRKIVTENAEEQNVGRAHKNE 660
K+ +K P++ + P D K+ +K K E EE+ K
Sbjct: 1617 -KSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEK-SPEKVEEKPTSPTKKES 1674
Query: 661 HVPKKIDVAKKEVT 674
KK D K T
Sbjct: 1675 SPTKKTDDEVKSPT 1688
>Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical
protein T28C6.3 protein.
Length = 200
Score = 29.9 bits (64), Expect = 6.5
Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Query: 496 DAQIFHIPSGIRNMMNAGIEQIHYEMHDLDHEAEYRE-EQKSNVEQVNYCLTVTTKITSK 554
DA F +P GI+ + +Q LD E ++ + +K V+ ++ + T+
Sbjct: 27 DATTFTMPIGIQEKLEILKKQDVQLQEALDMELKFLDTNEKLFVKTLHDAQKFHQEPTTS 86
Query: 555 FNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIE 614
F E+E + ++E + + V S E E++ + ++ +S IE
Sbjct: 87 FADELEESVLCESESESDALDESESEDSVVNEYVKE-SDDEEDDEDKEEYEDEEGKSIIE 145
Query: 615 HDKTSVAPQAAAANDTEPDTKTAQ 638
+ +++P + + T TKT+Q
Sbjct: 146 KEALTISPNSCNSKHTRNVTKTSQ 169
>Z29095-6|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 7 LFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRIN 66
L K E + +Q +N+ NE+ + + K +D T +EK A + D+I
Sbjct: 306 LQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLEETTDKIG 365
Query: 67 ISIDTVS 73
ID S
Sbjct: 366 SKIDNTS 372
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 29.9 bits (64), Expect = 6.5
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 557 PEVEAFIPASMMFPEGTIEEIAKDIKEME--AKVAAISQGNELIE-EEVLQKLQKAQSHI 613
P+V +P + FP G +E+ KD K M+ AK +S L E +++ KL + Q+ +
Sbjct: 215 PQVNYIVP-ELCFPTGLTDEMRKDFKMMKEIAKHTRMSPQQRLDETRKLITKLSQNQTMM 273
Query: 614 E 614
E
Sbjct: 274 E 274
>U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical
protein F46H5.8 protein.
Length = 393
Score = 29.9 bits (64), Expect = 6.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 34 GTEQPAVKLKCEDFTSNIEKLADVNDSLLDR 64
G + ++ LKCE+ N+ KL D+N+ ++R
Sbjct: 197 GIKNLSIGLKCENSNENVAKLTDLNNEEIER 227
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 52 EKLADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSP 96
+++ DVND L D + T +NL +E FA ND S+++ P
Sbjct: 6595 DRIVDVND-LFDNPTLQEFTKFVKNLTTEKFAGNTNDKISYDAIP 6638
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 29.9 bits (64), Expect = 6.5
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 582 KEMEAKVAAISQGNELI-EEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRK 640
KE EA+ + +LI E + ++++++ + DK + A + E + A+RK
Sbjct: 897 KEEEAEEERKREEEKLIAERKRIEEVEEQRKREAEDKEKIEQLNAKVREKE-ERSEARRK 955
Query: 641 RKIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQNATYDKFYNVT 691
+K ++ EE+ + + E K+I +K + N KFYN T
Sbjct: 956 QK-EKDDEEEKRLYEEKEKEQRKKQIKGIEKWTKSMDFKDNHKTAKFYNTT 1005
>Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical
protein T01D3.1 protein.
Length = 3191
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 365 MKNQIIEKNAGQTNMLLSVFEDSRQTCASTYN 396
+ N II N+ ++ ++F+D R TC TYN
Sbjct: 536 LANSIITTNSVNISISENLFQDKRSTCEITYN 567
>Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical
protein T01D3.1 protein.
Length = 3191
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 365 MKNQIIEKNAGQTNMLLSVFEDSRQTCASTYN 396
+ N II N+ ++ ++F+D R TC TYN
Sbjct: 536 LANSIITTNSVNISISENLFQDKRSTCEITYN 567
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8 protein.
Length = 949
Score = 29.5 bits (63), Expect = 8.5
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 560 EAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTS 619
E+ P+ P ++E DI++ A ++ + E E +Q+ S I D+T
Sbjct: 478 ESLSPSVRRSPVARVKERRADIRQRHASNSSAASHQEKPSREEIQRQIGTASRISSDETR 537
Query: 620 VAPQAAAAND--TEPDT---KTAQRKRKIVTENAEEQNVG-RAHKNE--HVPKKIDVAKK 671
+ ++ T+ D +A+RKR + + +E + ++ ++E K++D ++
Sbjct: 538 LRSLEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRR 597
Query: 672 EVTAGYQ 678
+++ Q
Sbjct: 598 QISQNSQ 604
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 29.5 bits (63), Expect = 8.5
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 6 DLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRI 65
D + T PE +I NV N + G+ + E + +N+EKL +L+
Sbjct: 888 DCWNTTPEMRPSLRRIKLNVETYLN-IKGSLVDQMTRMMEQYANNLEKLVAERTGMLEEA 946
Query: 66 NISIDTVSGENLPS 79
N D + + LP+
Sbjct: 947 NQRADRLLSQLLPA 960
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8 protein.
Length = 949
Score = 29.5 bits (63), Expect = 8.5
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 560 EAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTS 619
E+ P+ P ++E DI++ A ++ + E E +Q+ S I D+T
Sbjct: 478 ESLSPSVRRSPVARVKERRADIRQRHASNSSAASHQEKPSREEIQRQIGTASRISSDETR 537
Query: 620 VAPQAAAAND--TEPDT---KTAQRKRKIVTENAEEQNVG-RAHKNE--HVPKKIDVAKK 671
+ ++ T+ D +A+RKR + + +E + ++ ++E K++D ++
Sbjct: 538 LRSLEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRR 597
Query: 672 EVTAGYQ 678
+++ Q
Sbjct: 598 QISQNSQ 604
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Hypothetical
protein F41E6.4c protein.
Length = 536
Score = 29.5 bits (63), Expect = 8.5
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 583 EMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRK 642
E E +V ++ G E E+EV+ + Q + ++P+ + +P+T+T K+K
Sbjct: 66 ETETEVESVDGGQE--EKEVVDEKQVDAERVNTKTEELSPKKEVKAEEDPETET---KKK 120
Query: 643 IVTENAEEQNVGRAHKNEHVPKKIDVAK-KEVTAGYQYQN 681
+E Q ++ K PKK + ++ KE + G + N
Sbjct: 121 DPSEQTNGQVKKKSDKQS--PKKKEKSEGKENSPGSKLTN 158
>AF016448-7|AAW30664.1| 1084|Caenorhabditis elegans Hypothetical
protein F41E6.4a protein.
Length = 1084
Score = 29.5 bits (63), Expect = 8.5
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 583 EMEAKVAAISQGNELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRK 642
E E +V ++ G E E+EV+ + Q + ++P+ + +P+T+T K+K
Sbjct: 66 ETETEVESVDGGQE--EKEVVDEKQVDAERVNTKTEELSPKKEVKAEEDPETET---KKK 120
Query: 643 IVTENAEEQNVGRAHKNEHVPKKIDVAK-KEVTAGYQYQN 681
+E Q ++ K PKK + ++ KE + G + N
Sbjct: 121 DPSEQTNGQVKKKSDKQS--PKKKEKSEGKENSPGSKLTN 158
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 29.5 bits (63), Expect = 8.5
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 6 DLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRI 65
D + T PE +I NV N + G+ + E + +N+EKL +L+
Sbjct: 834 DCWNTTPEMRPSLRRIKLNVETYLN-IKGSLVDQMTRMMEQYANNLEKLVAERTGMLEEA 892
Query: 66 NISIDTVSGENLPS 79
N D + + LP+
Sbjct: 893 NQRADRLLSQLLPA 906
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,079,050
Number of Sequences: 27539
Number of extensions: 744476
Number of successful extensions: 2784
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2691
Number of HSP's gapped (non-prelim): 132
length of query: 709
length of database: 12,573,161
effective HSP length: 87
effective length of query: 622
effective length of database: 10,177,268
effective search space: 6330260696
effective search space used: 6330260696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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