GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000625-TA|BGIBMGA000625-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
         (185 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   4.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.1  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 31  GDKIYPSHKFLLQRNVRVQFMNIV---KKSEWCETLTIKFQK 69
           G K+ P+H  +  R    QFM I    K + W  TL + F K
Sbjct: 204 GPKMTPNHLHIWPRG---QFMMIALPNKDNSWTVTLFMPFGK 242


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 31  GDKIYPSHKFLLQRNVRVQFMNIV---KKSEWCETLTIKFQK 69
           G K+ P+H  +  R    QFM I    K + W  TL + F K
Sbjct: 204 GPKMTPNHLHIWPRG---QFMMIALPNKDNSWTVTLFMPFGK 242


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 31  GDKIYPSHKFLLQRNVRVQFMNIV---KKSEWCETLTIKFQK 69
           G K+ P+H  +  R    QFM I    K + W  TL + F K
Sbjct: 204 GPKMTPNHLHIWPRG---QFMMIALPNKDNSWTVTLFMPFGK 242


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 121 SNVMHLLSSAYLKKYMSCVS 140
           SN M  ++  Y    MSCVS
Sbjct: 17  SNAMSPMTPTYSMNSMSCVS 36


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,848
Number of Sequences: 317
Number of extensions: 1852
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 185
length of database: 114,650
effective HSP length: 53
effective length of query: 132
effective length of database: 97,849
effective search space: 12916068
effective search space used: 12916068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 41 (20.6 bits)