Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000625-TA|BGIBMGA000625-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
(185 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 29 0.42
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 27 1.3
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 27 2.2
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 27 2.2
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 25 5.1
SPAC23A1.14c |||cystathionine gamma-synthase |Schizosaccharomyce... 25 5.1
SPCC1235.10c |sec6||exocyst complex subunit Sec6|Schizosaccharom... 25 5.1
SPCC576.06c |||tyrosine-tRNA ligase|Schizosaccharomyces pombe|ch... 25 6.8
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 25 6.8
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 6.8
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 25 9.0
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 29.1 bits (62), Expect = 0.42
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 2 RALDIDYKGEEKLTLQEECLVPGWHFFYKGDKIYPSHKFLLQRNVRVQFMNIVKKSEWCE 61
R LD + K T++ ECL GW+ + K++P + L+ N + +I+ ++
Sbjct: 343 RLLDTELKSIH--TVKTECLEEGWYEVQQSAKMFPLNNSLVWENWSDGYFDILALDDYNH 400
Query: 62 TLTIKF 67
I F
Sbjct: 401 LAFIPF 406
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 144 EMDTRVDWSMLQKSVYEDINNEEYDYIPEMYDKI 177
E +D +K ED N E +YIPE Y+++
Sbjct: 174 ESSLSLDSGESEKKSEEDNGNGEQNYIPEQYERL 207
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 159 YEDINNEEYDYIPEMYDKIYGDSSSSE 185
Y+D N+ +Y++ E DK YG ++S+
Sbjct: 339 YDDSNSSQYNFKWEFDDKTYGPYTASQ 365
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 119 GFSNVMHLLSSAYLK-KYMSCVSSLFEMDTRVDWSMLQKSVYEDINNEEYDYI-PEMYDK 176
G ++++ + + Y +Y+ V + D RVD +Q ++++ EEY+ + P Y K
Sbjct: 20 GKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAK 79
Query: 177 IY 178
+
Sbjct: 80 AH 81
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 47 RVQFMNIVKKSEWCETLTIKFQKALNNLGFLGYFDKTACICVRDGMYGA 95
R++ + V+ ++ +LT K N G +G+F C+R YGA
Sbjct: 43 RMKIIFQVQNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGA 91
>SPAC23A1.14c |||cystathionine gamma-synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 29 YKGDKIYPSHKFLLQRNVRVQFMNIVKKSE 58
Y G ++P FLL R++R + I K SE
Sbjct: 242 YLGTILHPQQAFLLLRSLRTFPLRIAKHSE 271
>SPCC1235.10c |sec6||exocyst complex subunit
Sec6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 730
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 121 SNVMHLLSSAYLKKYMSCVSSLFEMDTRVDWSMLQKSVYEDINNEEYD 168
S HLL AY +S V ++ + T ++ S+++K + DI E D
Sbjct: 660 SEYFHLLKEAYWDAPLSLVEAVLQNRTDLEKSIIKKMI--DIVRHEND 705
>SPCC576.06c |||tyrosine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 445
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 108 MAPDAQWTNCTGFSNVMHLLSSAYLKKYMSCVSSLFEMDTRVDWSMLQKSV-YEDI 162
MA + N N + LSS+ L C +M + WS+++ S YE++
Sbjct: 88 MAETTRTANSNSIHNQLKDLSSSILSYAQDCNYPFSQMPSSSQWSIVRNSSWYENL 143
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 144 EMDTRVDWSMLQKSVYEDINNEEYDYIPEMYDKIYGDSSSSE 185
+MD R+ +L++ + DIN+EE E ++K+ + E
Sbjct: 156 DMDPRLR-EVLEQLEHSDINDEETSDFDEEFEKLVASGKADE 196
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 30 KGDKIYPSHKFLLQRNVRVQ-FMNIVKKSEWCETLTIKFQKALN 72
K +K + F + + ++ +N++ EWC T TI Q A+N
Sbjct: 572 KQNKTESDNSFAILTKILLEDLLNMLSLPEWCGTETIIRQFAMN 615
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 126 LLSSAYLKKYMSCVSSLFEMDTRVDWSMLQK 156
L S Y+KK + + L M V W++LQ+
Sbjct: 121 LKSKNYIKKSLQEIVYLTNMQPNVSWNVLQE 151
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.137 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 911,518
Number of Sequences: 5004
Number of extensions: 36291
Number of successful extensions: 93
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 86
Number of HSP's gapped (non-prelim): 11
length of query: 185
length of database: 2,362,478
effective HSP length: 69
effective length of query: 116
effective length of database: 2,017,202
effective search space: 233995432
effective search space used: 233995432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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