GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000625-TA|BGIBMGA000625-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
         (185 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   3.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   3.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 131 YLKKYMSCVSSLFEMDTRVDWSMLQKSV 158
           +L++Y S +  L     R+ W  +QK V
Sbjct: 72  FLEQYFSSIRRLNSEAHRIRWESVQKEV 99


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 51  MNIVKKSEWCETLTIKFQKALNN 73
           MN + K+E+   L+ + QK +NN
Sbjct: 370 MNRIHKNEYMLALSNRMQKIVNN 392


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 118 TGFSNVMHLLSSAYLKKYMS 137
           TGFS +    S + LKKY+S
Sbjct: 12  TGFSKLSSSDSKSLLKKYLS 31


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.137    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,080
Number of Sequences: 429
Number of extensions: 2523
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 185
length of database: 140,377
effective HSP length: 54
effective length of query: 131
effective length of database: 117,211
effective search space: 15354641
effective search space used: 15354641
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 41 (20.6 bits)