GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000621-TA|BGIBMGA000621-PA|IPR000886|Endoplasmic
reticulum targeting sequence, IPR002654|Glycosyl transferase, family
25
         (402 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    31   0.074
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        25   3.7  
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    25   3.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   8.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   8.5  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 30.7 bits (66), Expect = 0.074
 Identities = 10/30 (33%), Positives = 21/30 (70%)

Query: 175  PLEKDYEQMLNIKLEAISQGTPLPLNHMLE 204
            PL+++ + M ++++EA  QG P PL+  ++
Sbjct: 1344 PLDREQQMMYDLRIEAYDQGIPTPLSSTVD 1373


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 6   IHSDFNEDKSIEIINKWVENYGSEYNGMYVTTNTSSGPLHSDESSSTNWSPNH 58
           I ++F  D  IE+INK+ +   + Y+ M    + S+ P  +  ++  NW   H
Sbjct: 120 IATNFFVDDFIEVINKYQQIANTHYHAMLEKVSYSN-PTQT-AATINNWVSEH 170


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
          serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 6  IHSDFNEDKSIEIINKWVENYGSEYNGMYVTTNTSSGPLHSDESSSTNWSPNH 58
          I ++F  D  IE+INK+ +   + Y+ M    + S+ P  +  ++  NW   H
Sbjct: 21 IATNFFVDDFIEVINKYQQIANTHYHAMLEKVSYSN-PTQT-AATINNWVSEH 71


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 268  TLMPNYEDPYHKRYIGRKILLDGEEEYATPH 298
            T + N+    +   +GR + LD +E+YA+P+
Sbjct: 2639 TNLYNFHARLYDPELGRFLQLDPKEQYASPY 2669


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 268  TLMPNYEDPYHKRYIGRKILLDGEEEYATPH 298
            T + N+    +   +GR + LD +E+YA+P+
Sbjct: 2640 TNLYNFHARLYDPELGRFLQLDPKEQYASPY 2670


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,054
Number of Sequences: 2123
Number of extensions: 20643
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 8
length of query: 402
length of database: 516,269
effective HSP length: 65
effective length of query: 337
effective length of database: 378,274
effective search space: 127478338
effective search space used: 127478338
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)