BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000621-TA|BGIBMGA000621-PA|IPR000886|Endoplasmic
reticulum targeting sequence, IPR002654|Glycosyl transferase, family
25
(402 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-928|AAN10543.1| 612|Drosophila melanogaster CG31915-PA... 196 6e-50
BT003764-1|AAO41443.1| 595|Drosophila melanogaster RE30068p pro... 34 0.40
AE014296-1928|AAN11883.1| 721|Drosophila melanogaster CG6199-PB... 34 0.40
AE014296-1927|AAF50079.1| 721|Drosophila melanogaster CG6199-PA... 34 0.40
AY051748-1|AAK93172.1| 662|Drosophila melanogaster LD27655p pro... 31 2.1
AE013599-75|AAM68379.1| 662|Drosophila melanogaster CG10417-PB,... 31 2.1
AE013599-74|AAF57333.1| 662|Drosophila melanogaster CG10417-PA,... 31 2.1
AY089486-1|AAL90224.2| 205|Drosophila melanogaster AT31112p pro... 31 3.7
AE014134-1919|AAF52976.1| 409|Drosophila melanogaster CG7363-PA... 31 3.7
AY058623-1|AAL13852.1| 1139|Drosophila melanogaster LD31543p pro... 29 8.6
AE014298-2841|AAF48954.2| 1139|Drosophila melanogaster CG32533-P... 29 8.6
AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA ... 29 8.6
>AE014134-928|AAN10543.1| 612|Drosophila melanogaster CG31915-PA
protein.
Length = 612
Score = 196 bits (477), Expect = 6e-50
Identities = 95/215 (44%), Positives = 133/215 (61%), Gaps = 11/215 (5%)
Query: 77 CGMTENYYYKRTDDYKPILNRKKTGCFDVPMVHSAVLISMRYDVSDKLTYYPSKITN--- 133
CGMTE+YYY+RTD+YK I + KK G F VPMVH+AVL++M + LT+ +K+
Sbjct: 181 CGMTEDYYYRRTDEYKEIYHVKKQGSFPVPMVHTAVLVNMNHRAVRNLTFDRNKLVELQK 240
Query: 134 -------YDGPEDDIIAFALNSKALGIPLYICNEAIYGFVPVPLEDNDPLEKDYEQMLNI 186
YDGP DDII FA+++ + GIPL+ICN+ +G++ PLE D L+ D +Q++N+
Sbjct: 241 SRQQEPLYDGPADDIIVFAISANSSGIPLHICNDITFGYILQPLEPGDTLDHDVQQLVNL 300
Query: 187 KLEAISQ-GTPLPLNHMLEEYVTHPNKWKFGCDEIYMINLERRQERRFLMELSFKELGMS 245
K +++ G PL + P K K D I+MINL+RR ERR ME F E+G+
Sbjct: 301 KSIMVNELGAVPPLLDYYKHLEKKPEKSKLSLDRIFMINLKRRPERREKMERLFDEIGIE 360
Query: 246 VQHFSAIDGRNLDMNDLREYSITLMPNYEDPYHKR 280
+HF A+DG+ L L E + +P YEDPYH R
Sbjct: 361 AEHFPAVDGKELSTERLLEMGVRFLPGYEDPYHHR 395
Score = 132 bits (319), Expect = 8e-31
Identities = 64/113 (56%), Positives = 81/113 (71%), Gaps = 4/113 (3%)
Query: 277 YHKRYIGRKILLDGEEEYATPHTTRPL---YSYWTLGYLISERGAKKLLRADPLSKMLPV 333
Y Y GRK L + E E A + + YSYWTLGY+IS +GA KLL A PL K++PV
Sbjct: 453 YDLIYFGRKRLKE-ESEPAVENADNLVHAGYSYWTLGYVISLQGALKLLAAKPLDKLIPV 511
Query: 334 DEFLPIMFDQHPNEEWKSHFENRDLIALSAAPLLVHPTHYTGQPGYISDTEDS 386
DEFLP+MFD+HPN+ W F R+L+A SA+PLL++P +YTG+ GYISDTEDS
Sbjct: 512 DEFLPLMFDRHPNKTWTEAFPKRNLVAFSASPLLLYPIYYTGESGYISDTEDS 564
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 6 IHSDFNEDKSIEIINKWVENYGSEYNGMYVTTNTSSGPLHSDESSSTNWSPNHFRHVINM 65
+ D + D SIE++ +W++N G Y+ + + +S W + F+H+I +
Sbjct: 66 LRCDHSNDDSIELLRQWLDNSGDLYHSVSYEFKPEEQSF-VNGTSPYEWPASRFKHLIAL 124
Query: 66 REAALDFGRKL 76
+E A +GR +
Sbjct: 125 KEEAFQYGRDI 135
>BT003764-1|AAO41443.1| 595|Drosophila melanogaster RE30068p
protein.
Length = 595
Score = 33.9 bits (74), Expect = 0.40
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 79 MTENYYYKRTDDYKPILNRKKTGCFDVPMVHSAVLISMRYDVSDKLTYYPSKITNYDGPE 138
++E YY R+ DY I+ R+ G F+VP V S L+ + D +++ K +D P+
Sbjct: 419 LSEGGYYARSHDYVDIVKRELIGMFNVPHVTSIYLV--KKTAFDAISF---KHKEFD-PD 472
Query: 139 DDIIAFALNSKALGIPLYICNEAIYG 164
+A + + GI +Y N I+G
Sbjct: 473 ---MAMCESLRNAGIFMYASNLRIFG 495
>AE014296-1928|AAN11883.1| 721|Drosophila melanogaster CG6199-PB,
isoform B protein.
Length = 721
Score = 33.9 bits (74), Expect = 0.40
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 79 MTENYYYKRTDDYKPILNRKKTGCFDVPMVHSAVLISMRYDVSDKLTYYPSKITNYDGPE 138
++E YY R+ DY I+ R+ G F+VP V S L+ + D +++ K +D P+
Sbjct: 419 LSEGGYYARSHDYVDIVKRELIGMFNVPHVTSIYLV--KKTAFDAISF---KHKEFD-PD 472
Query: 139 DDIIAFALNSKALGIPLYICNEAIYG 164
+A + + GI +Y N I+G
Sbjct: 473 ---MAMCESLRNAGIFMYASNLRIFG 495
>AE014296-1927|AAF50079.1| 721|Drosophila melanogaster CG6199-PA,
isoform A protein.
Length = 721
Score = 33.9 bits (74), Expect = 0.40
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 79 MTENYYYKRTDDYKPILNRKKTGCFDVPMVHSAVLISMRYDVSDKLTYYPSKITNYDGPE 138
++E YY R+ DY I+ R+ G F+VP V S L+ + D +++ K +D P+
Sbjct: 419 LSEGGYYARSHDYVDIVKRELIGMFNVPHVTSIYLV--KKTAFDAISF---KHKEFD-PD 472
Query: 139 DDIIAFALNSKALGIPLYICNEAIYG 164
+A + + GI +Y N I+G
Sbjct: 473 ---MAMCESLRNAGIFMYASNLRIFG 495
>AY051748-1|AAK93172.1| 662|Drosophila melanogaster LD27655p
protein.
Length = 662
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 89 DDYKPILN-RKKTGCFDVPMVHSAVLISMRYDVSDKLTYYPSKITNYDGPEDDIIAFALN 147
D + ILN T F V H ++ +Y +DKL ++ + Y + ++ AL
Sbjct: 38 DAHNSILNFDNNTSFFAVYDGHGGAEVA-QY-CADKLPHFLKNLETYKNGQFEV---ALK 92
Query: 148 SKALGIPLYICNEAIYGFVPVPLEDNDPLEKDYEQMLNIKLEAISQGTPLPLNHMLEEYV 207
LG + + +I + + +++ ++ + + L + + + LPLN +LE+Y
Sbjct: 93 EAFLGFDKTLLDPSIVSILKILAGEHNFVDAEADDYEEEDLAELQEESNLPLNEVLEKYK 152
Query: 208 THPNK 212
P K
Sbjct: 153 GLPQK 157
>AE013599-75|AAM68379.1| 662|Drosophila melanogaster CG10417-PB,
isoform B protein.
Length = 662
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 89 DDYKPILN-RKKTGCFDVPMVHSAVLISMRYDVSDKLTYYPSKITNYDGPEDDIIAFALN 147
D + ILN T F V H ++ +Y +DKL ++ + Y + ++ AL
Sbjct: 38 DAHNSILNFDNNTSFFAVYDGHGGAEVA-QY-CADKLPHFLKNLETYKNGQFEV---ALK 92
Query: 148 SKALGIPLYICNEAIYGFVPVPLEDNDPLEKDYEQMLNIKLEAISQGTPLPLNHMLEEYV 207
LG + + +I + + +++ ++ + + L + + + LPLN +LE+Y
Sbjct: 93 EAFLGFDKTLLDPSIVSILKILAGEHNFVDAEADDYEEEDLAELQEESNLPLNEVLEKYK 152
Query: 208 THPNK 212
P K
Sbjct: 153 GLPQK 157
>AE013599-74|AAF57333.1| 662|Drosophila melanogaster CG10417-PA,
isoform A protein.
Length = 662
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 89 DDYKPILN-RKKTGCFDVPMVHSAVLISMRYDVSDKLTYYPSKITNYDGPEDDIIAFALN 147
D + ILN T F V H ++ +Y +DKL ++ + Y + ++ AL
Sbjct: 38 DAHNSILNFDNNTSFFAVYDGHGGAEVA-QY-CADKLPHFLKNLETYKNGQFEV---ALK 92
Query: 148 SKALGIPLYICNEAIYGFVPVPLEDNDPLEKDYEQMLNIKLEAISQGTPLPLNHMLEEYV 207
LG + + +I + + +++ ++ + + L + + + LPLN +LE+Y
Sbjct: 93 EAFLGFDKTLLDPSIVSILKILAGEHNFVDAEADDYEEEDLAELQEESNLPLNEVLEKYK 152
Query: 208 THPNK 212
P K
Sbjct: 153 GLPQK 157
>AY089486-1|AAL90224.2| 205|Drosophila melanogaster AT31112p
protein.
Length = 205
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 30 YNGMYVTTNTSSGPLHSDESSSTNWSPNHFRHVINMREAALDFGRKLCGMTENYYYK 86
+ GM ++ ++ + S+S+ P I R A DF RK+ + ENY Y+
Sbjct: 101 WKGMLLSVTHTTLSTSTSHSTSSGKPPKSAVQAIPQRTAKADFKRKMYVLKENYNYR 157
>AE014134-1919|AAF52976.1| 409|Drosophila melanogaster CG7363-PA
protein.
Length = 409
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 30 YNGMYVTTNTSSGPLHSDESSSTNWSPNHFRHVINMREAALDFGRKLCGMTENYYYK 86
+ GM ++ ++ + S+S+ P I R A DF RK+ + ENY Y+
Sbjct: 305 WKGMLLSVTHTTLSTSTSHSTSSGKPPKSAVQAIPQRTAKADFKRKMYVLKENYNYR 361
>AY058623-1|AAL13852.1| 1139|Drosophila melanogaster LD31543p
protein.
Length = 1139
Score = 29.5 bits (63), Expect = 8.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 343 QHPNEEWKSHFENRDLIALSAAPLLVHPTHYT 374
QHPN ++ HFE L+ L+ + LL P YT
Sbjct: 825 QHPNSQFAKHFE---LLKLTESDLLPKPDFYT 853
>AE014298-2841|AAF48954.2| 1139|Drosophila melanogaster CG32533-PA
protein.
Length = 1139
Score = 29.5 bits (63), Expect = 8.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 343 QHPNEEWKSHFENRDLIALSAAPLLVHPTHYT 374
QHPN ++ HFE L+ L+ + LL P YT
Sbjct: 825 QHPNSQFAKHFE---LLKLTESDLLPKPDFYT 853
>AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA
protein.
Length = 3242
Score = 29.5 bits (63), Expect = 8.6
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 313 ISERGAKKLLRADPLSKMLPVDEFLPIMFDQHPNEEWKSHFENRDLIALSAAPLLVH 369
+S+ A K R D S LP+ F F++H EE KS ++N L PL +H
Sbjct: 2792 VSDEAAAKQFRQDVESIELPLSAF----FEEHSLEEQKSFYDN-----LHLGPLKIH 2839
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.137 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,039,689
Number of Sequences: 52641
Number of extensions: 1017469
Number of successful extensions: 2369
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2358
Number of HSP's gapped (non-prelim): 14
length of query: 402
length of database: 24,830,863
effective HSP length: 87
effective length of query: 315
effective length of database: 20,251,096
effective search space: 6379095240
effective search space used: 6379095240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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