GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000620-TA|BGIBMGA000620-PA|IPR005199|Glycoside hydrolase
family 79, N-terminal
         (514 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p pro...    33   0.94 
AF324426-1|AAG48328.1| 2531|Drosophila melanogaster transcriptio...    33   0.94 
AE014296-3230|AAF49103.2| 2531|Drosophila melanogaster CG8491-PA...    33   0.94 
AY060626-1|AAL28174.1|  517|Drosophila melanogaster GH04680p pro...    31   3.8  
AE014296-976|AAF50764.1|  517|Drosophila melanogaster CG5150-PA ...    31   3.8  

>AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p
           protein.
          Length = 1608

 Score = 33.1 bits (72), Expect = 0.94
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 356 IRQSFIGGYYSLVDENLKPLPDWWISVLYKKLVGNKVLQVQCNCSRF 402
           +R S +GG +  + +N  P  DW  ++L  +LV   V+ + CN   F
Sbjct: 724 LRFSLVGGMFEAIQKNSTPTTDW--AILLAQLVCQGVVDLSCNRELF 768


>AF324426-1|AAG48328.1| 2531|Drosophila melanogaster transcriptional
            coactivator kohtaloprotein.
          Length = 2531

 Score = 33.1 bits (72), Expect = 0.94
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 356  IRQSFIGGYYSLVDENLKPLPDWWISVLYKKLVGNKVLQVQCNCSRF 402
            +R S +GG +  + +N  P  DW  ++L  +LV   V+ + CN   F
Sbjct: 1687 LRFSLVGGMFEAIQKNSTPTTDW--AILLAQLVCQGVVDLSCNRELF 1731


>AE014296-3230|AAF49103.2| 2531|Drosophila melanogaster CG8491-PA
            protein.
          Length = 2531

 Score = 33.1 bits (72), Expect = 0.94
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 356  IRQSFIGGYYSLVDENLKPLPDWWISVLYKKLVGNKVLQVQCNCSRF 402
            +R S +GG +  + +N  P  DW  ++L  +LV   V+ + CN   F
Sbjct: 1687 LRFSLVGGMFEAIQKNSTPTTDW--AILLAQLVCQGVVDLSCNRELF 1731


>AY060626-1|AAL28174.1|  517|Drosophila melanogaster GH04680p
           protein.
          Length = 517

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/35 (37%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 284 EDFWNPETFDLLRQQIETMQNQTKKYKNIPMWLSE 318
           ++FW+  +  L+R+++E ++N TKK KNI ++L +
Sbjct: 51  QEFWHSASKKLIREKLEFVRN-TKKAKNIILFLGD 84


>AE014296-976|AAF50764.1|  517|Drosophila melanogaster CG5150-PA
           protein.
          Length = 517

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/35 (37%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 284 EDFWNPETFDLLRQQIETMQNQTKKYKNIPMWLSE 318
           ++FW+  +  L+R+++E ++N TKK KNI ++L +
Sbjct: 51  QEFWHSASKKLIREKLEFVRN-TKKAKNIILFLGD 84


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.137    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,786,408
Number of Sequences: 52641
Number of extensions: 1193985
Number of successful extensions: 2700
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2698
Number of HSP's gapped (non-prelim): 7
length of query: 514
length of database: 24,830,863
effective HSP length: 88
effective length of query: 426
effective length of database: 20,198,455
effective search space: 8604541830
effective search space used: 8604541830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)