Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000620-TA|BGIBMGA000620-PA|IPR005199|Glycoside hydrolase
family 79, N-terminal
(514 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g34940.2 68418.m04121 glycosyl hydrolase family 79 N-terminal... 120 3e-27
At5g34940.1 68418.m04120 glycosyl hydrolase family 79 N-terminal... 120 3e-27
At5g61250.2 68418.m07684 glycosyl hydrolase family 79 N-terminal... 116 4e-26
At5g61250.1 68418.m07683 glycosyl hydrolase family 79 N-terminal... 116 4e-26
At5g07830.1 68418.m00898 glycosyl hydrolase family 79 N-terminal... 109 3e-24
At5g34940.3 68418.m04122 glycosyl hydrolase family 79 N-terminal... 95 1e-19
At1g32230.2 68414.m03965 WWE domain-containing protein / ceo pro... 32 0.79
At2g28630.1 68415.m03481 beta-ketoacyl-CoA synthase family protein 30 3.2
At4g09800.1 68417.m01609 40S ribosomal protein S18 (RPS18C) 30 4.2
At1g34030.1 68414.m04219 40S ribosomal protein S18 (RPS18B) simi... 30 4.2
At1g22780.1 68414.m02846 40S ribosomal protein S18 (RPS18A) Matc... 30 4.2
At5g43745.1 68418.m05349 phosphotransferase-related similar to s... 29 5.6
At5g19580.1 68418.m02331 glyoxal oxidase-related contains simila... 29 7.4
At4g11390.1 68417.m01837 DC1 domain-containing protein contains ... 29 9.8
At1g72700.1 68414.m08407 haloacid dehalogenase-like hydrolase fa... 29 9.8
At1g15280.2 68414.m01829 glycine-rich protein 29 9.8
At1g15280.1 68414.m01828 glycine-rich protein 29 9.8
>At5g34940.2 68418.m04121 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
precursor [Scutellaria baicalensis] GI:8918740; contains
Pfam profile PF03662: Glycosyl hydrolase family 79,
N-terminal domain
Length = 536
Score = 120 bits (288), Expect = 3e-27
Identities = 107/406 (26%), Positives = 180/406 (44%), Gaps = 45/406 (11%)
Query: 144 WNQINDFCRKTNLKLLFSLNAM----LRDNH----GWNEKNARELIEFSKHKQYAID-WQ 194
W+++N F RKT K++F LNA+ ++ N WN NA I F+ Y ID W+
Sbjct: 139 WDELNAFFRKTGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWE 198
Query: 195 LGNEPNSFQHVFNESVTPQILAKDFEKLRKLLNH---NGYRHSLIVGPDTTRPQPHRPEC 251
LGNE V A D LR ++N N L++GP
Sbjct: 199 LGNELCGSG--VGARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFE------- 249
Query: 252 LKYMIEFLGNGSHYINVRSWHQYYLNSKTAK--LEDFWNPETFDLLRQQIETMQNQTKKY 309
+ + E+L + +N + H Y L + +E NP D + +++N K
Sbjct: 250 VDWFTEYLNKAENSLNATTRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNS 309
Query: 310 KNIPM-WLSETSSSYGGGAPGLSNTYAGSPLWIDKLGLSAKYNISTVIRQSFIGGYYSLV 368
+ W+ E+ +Y G +SN + S ++D+LG+++ Y+ T RQS IGG Y L+
Sbjct: 310 STKAVAWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNYGLL 369
Query: 369 D-ENLKPLPDWWISVLYKKLVGNKVLQVQCNCSRFQRLYIHCTNR---------KYTNDT 418
+ N P PD++ ++++++L+G K L + ++ R Y HC + N T
Sbjct: 370 NTTNFTPNPDYYSALIWRQLMGRKALFTTFSGTKKIRSYTHCARQSKGITVLLMNLDNTT 429
Query: 419 SAVTLYGVNLEMA-------KARFFLNGTALHGDDLII--HEYIISAPSNNRKSKTILLN 469
+ V +N + K+ + G + +I EY ++A N S+T+LLN
Sbjct: 430 TVVAKVELNNSFSLRHTKHMKSYKRASSQLFGGPNGVIQREEYHLTAKDGNLHSQTMLLN 489
Query: 470 GWPLYYES--NLHNLRPNIHRYGRYVSLPPYSIGFWVIKKTSITVC 513
G L S +L + P +++ PYSI F ++ + C
Sbjct: 490 GNALQVNSMGDLPPIEPIHINSTEPITIAPYSIVFVHMRNVVVPAC 535
>At5g34940.1 68418.m04120 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
precursor [Scutellaria baicalensis] GI:8918740; contains
Pfam profile PF03662: Glycosyl hydrolase family 79,
N-terminal domain
Length = 401
Score = 120 bits (288), Expect = 3e-27
Identities = 107/406 (26%), Positives = 180/406 (44%), Gaps = 45/406 (11%)
Query: 144 WNQINDFCRKTNLKLLFSLNAM----LRDNH----GWNEKNARELIEFSKHKQYAID-WQ 194
W+++N F RKT K++F LNA+ ++ N WN NA I F+ Y ID W+
Sbjct: 4 WDELNAFFRKTGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWE 63
Query: 195 LGNEPNSFQHVFNESVTPQILAKDFEKLRKLLNH---NGYRHSLIVGPDTTRPQPHRPEC 251
LGNE V A D LR ++N N L++GP
Sbjct: 64 LGNELCGSG--VGARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFE------- 114
Query: 252 LKYMIEFLGNGSHYINVRSWHQYYLNSKTAK--LEDFWNPETFDLLRQQIETMQNQTKKY 309
+ + E+L + +N + H Y L + +E NP D + +++N K
Sbjct: 115 VDWFTEYLNKAENSLNATTRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNS 174
Query: 310 KNIPM-WLSETSSSYGGGAPGLSNTYAGSPLWIDKLGLSAKYNISTVIRQSFIGGYYSLV 368
+ W+ E+ +Y G +SN + S ++D+LG+++ Y+ T RQS IGG Y L+
Sbjct: 175 STKAVAWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNYGLL 234
Query: 369 D-ENLKPLPDWWISVLYKKLVGNKVLQVQCNCSRFQRLYIHCTNR---------KYTNDT 418
+ N P PD++ ++++++L+G K L + ++ R Y HC + N T
Sbjct: 235 NTTNFTPNPDYYSALIWRQLMGRKALFTTFSGTKKIRSYTHCARQSKGITVLLMNLDNTT 294
Query: 419 SAVTLYGVNLEMA-------KARFFLNGTALHGDDLII--HEYIISAPSNNRKSKTILLN 469
+ V +N + K+ + G + +I EY ++A N S+T+LLN
Sbjct: 295 TVVAKVELNNSFSLRHTKHMKSYKRASSQLFGGPNGVIQREEYHLTAKDGNLHSQTMLLN 354
Query: 470 GWPLYYES--NLHNLRPNIHRYGRYVSLPPYSIGFWVIKKTSITVC 513
G L S +L + P +++ PYSI F ++ + C
Sbjct: 355 GNALQVNSMGDLPPIEPIHINSTEPITIAPYSIVFVHMRNVVVPAC 400
>At5g61250.2 68418.m07684 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
GI:8918740 from [Scutellaria baicalensis]
Length = 539
Score = 116 bits (279), Expect = 4e-26
Identities = 109/414 (26%), Positives = 186/414 (44%), Gaps = 54/414 (13%)
Query: 144 WNQINDFCRKTNLKLLFSLNAMLRDNH--------GWNEKNARELIEFSKHKQYAID-WQ 194
W+++N F T + F LNA+ N W+ N ++ + ++ K YAID W+
Sbjct: 135 WDEVNHFFNATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYTVSKGYAIDSWE 194
Query: 195 LGNEPNSFQHVFNESVTPQILAKDFEKLRKLLNHNGYRHS----LIVGPDTTRPQPHRPE 250
GNE + ++ SV+ ++ KD L+ ++ N Y++S L+V P + E
Sbjct: 195 FGNELSG-SGIW-ASVSVELYGKDLIVLKNVIK-NVYKNSRTKPLVVAPGGFFEEQWYSE 251
Query: 251 CLKYMIEFLGNGSHYINVRSWHQYYLN-SKTAKLED-FWNPETFDLLRQQIETMQNQTKK 308
L+ +G ++V + H Y L KL + +P + + + ++
Sbjct: 252 LLRL------SGPGVLDVLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQTIQE 305
Query: 309 YKN-IPMWLSETSSSYGGGAPGLSNTYAGSPLWIDKLGLSAKYNISTVIRQSFIGGYYSL 367
+ W+ E ++ G +S T+ S ++D+LG+S+K+N RQ+ +GG+Y L
Sbjct: 306 HGPWAAAWVGEAGGAFNSGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGFYGL 365
Query: 368 VD-ENLKPLPDWWISVLYKKLVGNKVLQVQCNCSRFQRLYIHCTNR------------KY 414
++ E P PD++ ++L+ +L+G +L VQ S + R Y+HC+ R K+
Sbjct: 366 LEKETFVPNPDYYSALLWHRLMGKGILGVQTTASEYLRAYVHCSKRRAGITILLINLSKH 425
Query: 415 TNDTSAVTLYGVNL----EMAKARFFLN---------GTALHGDDLIIHEYIISAPSNNR 461
T T AV+ GV + E K + FL G L EY +S +
Sbjct: 426 TTFTVAVS-NGVKVVLQAESMKRKSFLETIKSKVSWVGNKASDGYLNREEYHLSPKDGDL 484
Query: 462 KSKTILLNGWPLY--YESNLHNLRPNIHRYGRYVSLPPYSIGFWVIKKTSITVC 513
+SK +LLNG PL ++ L P H V + P SI F V+ C
Sbjct: 485 RSKIMLLNGKPLVPTATGDIPKLEPVRHGVKSPVYINPLSISFIVLPTFDAPAC 538
>At5g61250.1 68418.m07683 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
GI:8918740 from [Scutellaria baicalensis]
Length = 539
Score = 116 bits (279), Expect = 4e-26
Identities = 109/414 (26%), Positives = 186/414 (44%), Gaps = 54/414 (13%)
Query: 144 WNQINDFCRKTNLKLLFSLNAMLRDNH--------GWNEKNARELIEFSKHKQYAID-WQ 194
W+++N F T + F LNA+ N W+ N ++ + ++ K YAID W+
Sbjct: 135 WDEVNHFFNATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYTVSKGYAIDSWE 194
Query: 195 LGNEPNSFQHVFNESVTPQILAKDFEKLRKLLNHNGYRHS----LIVGPDTTRPQPHRPE 250
GNE + ++ SV+ ++ KD L+ ++ N Y++S L+V P + E
Sbjct: 195 FGNELSG-SGIW-ASVSVELYGKDLIVLKNVIK-NVYKNSRTKPLVVAPGGFFEEQWYSE 251
Query: 251 CLKYMIEFLGNGSHYINVRSWHQYYLN-SKTAKLED-FWNPETFDLLRQQIETMQNQTKK 308
L+ +G ++V + H Y L KL + +P + + + ++
Sbjct: 252 LLRL------SGPGVLDVLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQTIQE 305
Query: 309 YKN-IPMWLSETSSSYGGGAPGLSNTYAGSPLWIDKLGLSAKYNISTVIRQSFIGGYYSL 367
+ W+ E ++ G +S T+ S ++D+LG+S+K+N RQ+ +GG+Y L
Sbjct: 306 HGPWAAAWVGEAGGAFNSGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGFYGL 365
Query: 368 VD-ENLKPLPDWWISVLYKKLVGNKVLQVQCNCSRFQRLYIHCTNR------------KY 414
++ E P PD++ ++L+ +L+G +L VQ S + R Y+HC+ R K+
Sbjct: 366 LEKETFVPNPDYYSALLWHRLMGKGILGVQTTASEYLRAYVHCSKRRAGITILLINLSKH 425
Query: 415 TNDTSAVTLYGVNL----EMAKARFFLN---------GTALHGDDLIIHEYIISAPSNNR 461
T T AV+ GV + E K + FL G L EY +S +
Sbjct: 426 TTFTVAVS-NGVKVVLQAESMKRKSFLETIKSKVSWVGNKASDGYLNREEYHLSPKDGDL 484
Query: 462 KSKTILLNGWPLY--YESNLHNLRPNIHRYGRYVSLPPYSIGFWVIKKTSITVC 513
+SK +LLNG PL ++ L P H V + P SI F V+ C
Sbjct: 485 RSKIMLLNGKPLVPTATGDIPKLEPVRHGVKSPVYINPLSISFIVLPTFDAPAC 538
>At5g07830.1 68418.m00898 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
GI:8918740 from [Scutellaria baicalensis]
Length = 543
Score = 109 bits (263), Expect = 3e-24
Identities = 98/411 (23%), Positives = 186/411 (45%), Gaps = 47/411 (11%)
Query: 144 WNQINDFCRKTNLKLLFSLNAMLRDNH---------GWNEKNARELIEFSKHKQYAID-W 193
W+++N F T + F LNA LR H W+ N ++ + ++ K Y ID W
Sbjct: 138 WDELNSFLTATGAVVTFGLNA-LRGRHKLRGKAWGGAWDHINTQDFLNYTVSKGYVIDSW 196
Query: 194 QLGNEPNSFQHVFNESVTPQILAKDFEKLRKLLNHNGYRHSLIVGPDTTRPQP-HRPECL 252
+ GNE + SV+ ++ KD L+ ++N Y++S + P P + +
Sbjct: 197 EFGNELSGSG--VGASVSAELYGKDLIVLKDVIN-KVYKNSWLHKPILVAPGGFYEQQWY 253
Query: 253 KYMIEFLGNGSHYINVRSWHQYYLNSKT--AKLEDFWNPETFDLLRQQIETMQNQTKKYK 310
++E +G ++V + H Y L S A ++ +P + + + + +++
Sbjct: 254 TKLLEI--SGPSVVDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKTFKDVNQTIQEHG 311
Query: 311 N-IPMWLSETSSSYGGGAPGLSNTYAGSPLWIDKLGLSAKYNISTVIRQSFIGGYYSLVD 369
W+ E+ +Y G +S+T+ S ++D+LG+SA++N RQ+ +GG+Y L++
Sbjct: 312 PWASPWVGESGGAYNSGGRHVSDTFIDSFWYLDQLGMSARHNTKVYCRQTLVGGFYGLLE 371
Query: 370 E-NLKPLPDWWISVLYKKLVGNKVLQVQCNCSRFQRLYIHCT-----------NRKYTND 417
+ P PD++ ++L+ +L+G VL VQ + R+Y HC+ N +D
Sbjct: 372 KGTFVPNPDYYSALLWHRLMGKGVLAVQTDGPPQLRVYAHCSKGRAGVTLLLINLSNQSD 431
Query: 418 TSAVTLYGVN-------------LEMAKARFFLNGTALHGDDLIIHEYIISAPSNNRKSK 464
+ G+N L+ K F G+ L EY ++ + +SK
Sbjct: 432 FTVSVSNGINVVLNAESRKKKSLLDTLKRPFSWIGSKASDGYLNREEYHLTPENGVLRSK 491
Query: 465 TILLNGWPL--YYESNLHNLRPNIHRYGRYVSLPPYSIGFWVIKKTSITVC 513
T++LNG L ++ +L P + +++ P S+ F V+ + C
Sbjct: 492 TMVLNGKSLKPTATGDIPSLEPVLRSVNSPLNVLPLSMSFIVLPNFDASAC 542
>At5g34940.3 68418.m04122 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
precursor [Scutellaria baicalensis] GI:8918740; contains
Pfam profile PF03662: Glycosyl hydrolase family 79,
N-terminal domain
Length = 382
Score = 94.7 bits (225), Expect = 1e-19
Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 25/252 (9%)
Query: 144 WNQINDFCRKTNLKLLFSLNAM----LRDNH----GWNEKNARELIEFSKHKQYAID-WQ 194
W+++N F RKT K++F LNA+ ++ N WN NA I F+ Y ID W+
Sbjct: 139 WDELNAFFRKTGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWE 198
Query: 195 LGNEPNSFQHVFNESVTPQILAKDFEKLRKLLNH---NGYRHSLIVGPDTTRPQPHRPEC 251
LGNE V A D LR ++N N L++GP
Sbjct: 199 LGNELCGSG--VGARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFE------- 249
Query: 252 LKYMIEFLGNGSHYINVRSWHQYYLNSKTAK--LEDFWNPETFDLLRQQIETMQNQTKKY 309
+ + E+L + +N + H Y L + +E NP D + +++N K
Sbjct: 250 VDWFTEYLNKAENSLNATTRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNS 309
Query: 310 KNIPM-WLSETSSSYGGGAPGLSNTYAGSPLWIDKLGLSAKYNISTVIRQSFIGGYYSLV 368
+ W+ E+ +Y G +SN + S ++D+LG+++ Y+ T RQS IGG Y L+
Sbjct: 310 STKAVAWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNYGLL 369
Query: 369 D-ENLKPLPDWW 379
+ N P PD++
Sbjct: 370 NTTNFTPNPDYY 381
>At1g32230.2 68414.m03965 WWE domain-containing protein / ceo
protein, putative (CEO) contains Pfam domain, PF02825:
WWE domain; identical to cDNA for ceo protein (ceo gene)
GI:11044956
Length = 588
Score = 32.3 bits (70), Expect = 0.79
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 188 QYAIDWQLGNEPNSFQHVFNESVTPQILAKDFEKLRKLLNHNGYRHS---LIVGPDTTRP 244
++ + ++L N PN+ ++ + + + + L L NG R S VG TTRP
Sbjct: 443 EFVVRFKLSNLPNAEGNLIAKRDNSGVTLEGPKDLPPQLESNGARGSGSANSVGSSTTRP 502
Query: 245 Q-PHRP-ECLKYMIEFLGNGSHYINVRSWHQYYLNSKTAKLEDFWNPETF---DLLRQQI 299
+ P P L I + + + + +Q + K + E DLLR I
Sbjct: 503 KSPWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTI 562
Query: 300 ETMQNQTKKYKNIPMWLSETSSSYGG 325
T+QNQ K K IP + + GG
Sbjct: 563 TTLQNQPKS-KEIPGSIRDHEEGAGG 587
>At2g28630.1 68415.m03481 beta-ketoacyl-CoA synthase family protein
Length = 476
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 152 RKTNLKLLFSLNAMLRDNHGWNEKNARELIEFSKHKQYAIDWQLG-NEPNSFQHVFNES- 209
R K +F L M+R +HG E++ I+ ++ +Q + + LG N P + F E+
Sbjct: 230 RSLRKKAMFKLKCMVRTHHGAREESYNCCIQ-AEDEQGRVGFYLGKNLPKAATRAFVENL 288
Query: 210 --VTPQIL 215
+TP+IL
Sbjct: 289 KVITPKIL 296
>At4g09800.1 68417.m01609 40S ribosomal protein S18 (RPS18C)
Length = 152
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 187 KQYAI-DWQLGNEPNSFQHVFNESVTPQI---LAKDFEKLRKLLNHNGYRH 233
+Q+ I DW L + + +++ V+ + L D E+L+K+ NH G RH
Sbjct: 75 RQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRH 125
>At1g34030.1 68414.m04219 40S ribosomal protein S18 (RPS18B) similar
to ribosomal protein S18 GI:38422 from [Homo sapiens]
Length = 152
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 187 KQYAI-DWQLGNEPNSFQHVFNESVTPQI---LAKDFEKLRKLLNHNGYRH 233
+Q+ I DW L + + +++ V+ + L D E+L+K+ NH G RH
Sbjct: 75 RQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRH 125
>At1g22780.1 68414.m02846 40S ribosomal protein S18 (RPS18A) Match
to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from
A. thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and
gb|R30430 come from this gene
Length = 152
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 187 KQYAI-DWQLGNEPNSFQHVFNESVTPQI---LAKDFEKLRKLLNHNGYRH 233
+Q+ I DW L + + +++ V+ + L D E+L+K+ NH G RH
Sbjct: 75 RQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRH 125
>At5g43745.1 68418.m05349 phosphotransferase-related similar to
streptomycin-3'-phosphotransferase [Streptomyces
griseus] GI:153164
Length = 817
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 288 NPETFDLLRQQIETMQNQTKKYKNIPM 314
NP +D L+Q I M+++ +K KNIP+
Sbjct: 618 NPLNYDTLKQTIMRMKSKYRKGKNIPL 644
>At5g19580.1 68418.m02331 glyoxal oxidase-related contains
similarity to glyoxal oxidase precursor [Phanerochaete
chrysosporium] gi|1050302|gb|AAA87594
Length = 594
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 398 NCSRFQRLYIHCTNRKYTNDTSAVTLYGVNLEMAKARFFLNGTALHGDDLIIHEYIISAP 457
N +R+ +C +Y +A Y + +FF+ G G D + +EYI
Sbjct: 182 NTARYLSSCENCKWEEYPQALAAKRWYSTQATLPDGKFFVIG----GRDALNYEYIPEEG 237
Query: 458 SNNRK-SKTILLNGWPLYYESNLH 480
NNRK ++LL E+NL+
Sbjct: 238 QNNRKLFDSLLLRQTDDPEENNLY 261
>At4g11390.1 68417.m01837 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 514
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 273 QYYLNSKTAKLEDFWNPETFDLLRQQIETMQNQTKKYKNI 312
QY ++SK A D WN + + + ++IE ++ Y NI
Sbjct: 108 QYVIHSKCATRNDVWNGKELEGVPEEIEDIKPYVVIYGNI 147
>At1g72700.1 68414.m08407 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0,
SP|O43520]; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase
Length = 1228
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 352 ISTVIRQSFIGGYYSLVDENLKPLPDWWISVL 383
I +++ S+ G Y ++DE L P P +W++ L
Sbjct: 1102 IYSMMPPSYSGNIYRILDEILAPAPIYWMATL 1133
>At1g15280.2 68414.m01829 glycine-rich protein
Length = 585
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 7/42 (16%)
Query: 300 ETMQNQTKKYKNI-----PMWLSET--SSSYGGGAPGLSNTY 334
E++ KKY+N P+W ++T S+S G GAP NT+
Sbjct: 311 ESVTPSGKKYRNTKSGYSPVWTAKTLQSTSQGRGAPAAGNTF 352
>At1g15280.1 68414.m01828 glycine-rich protein
Length = 584
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 7/42 (16%)
Query: 300 ETMQNQTKKYKNI-----PMWLSET--SSSYGGGAPGLSNTY 334
E++ KKY+N P+W ++T S+S G GAP NT+
Sbjct: 310 ESVTPSGKKYRNTKSGYSPVWTAKTLQSTSQGRGAPAAGNTF 351
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.137 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,929,049
Number of Sequences: 28952
Number of extensions: 569834
Number of successful extensions: 1348
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1315
Number of HSP's gapped (non-prelim): 23
length of query: 514
length of database: 12,070,560
effective HSP length: 84
effective length of query: 430
effective length of database: 9,638,592
effective search space: 4144594560
effective search space used: 4144594560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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