Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000619-TA|BGIBMGA000619-PA|IPR001179|Peptidylprolyl
isomerase, FKBP-type, IPR002048|Calcium-binding EF-hand,
IPR000886|Endoplasmic reticulum targeting sequence
(148 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 52 5e-08
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 40 1e-04
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 37 0.001
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 36 0.002
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.014
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 30 0.13
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 30 0.17
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 30 0.17
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 28 0.68
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 27 0.89
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 27 0.89
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 0.89
SPBC21C3.09c |||fumarylacetoacetate |Schizosaccharomyces pombe|c... 27 1.2
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 26 2.1
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 26 2.7
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 26 2.7
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 26 2.7
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 26 2.7
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 26 2.7
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 3.6
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 25 3.6
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 4.8
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 25 4.8
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 25 6.3
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 25 6.3
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 24 8.3
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 24 8.3
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 24 8.3
SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 24 8.3
>SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase
Fkh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 112
Score = 51.6 bits (118), Expect = 5e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 1 MCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINIGD 43
M +GEK KLTI GYG RG +IPP++TL F+VEL+ I D
Sbjct: 67 MSLGEKAKLTITPDYGYGPRGFPGLIPPNSTLLFDVELLAIND 109
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 40.3 bits (90), Expect = 1e-04
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 65 EEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIF 124
+E ++ AF+ D DRDG +S E+ YL +M+ G + ED Q+ + DK + E+
Sbjct: 91 KEEKLKFAFKIYDIDRDGYISNGEL--YLVLKMMV--GTNLRED--QLQQIVDKTIMEV- 143
Query: 125 QHEDKDKNGFISHEEF 140
DKD++G IS EEF
Sbjct: 144 ---DKDRDGKISFEEF 156
Score = 24.2 bits (50), Expect = 8.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 69 IELAFQAMDTDRDGELSREEVSD 91
++ +D DRDG++S EE D
Sbjct: 136 VDKTIMEVDKDRDGKISFEEFKD 158
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 37.1 bits (82), Expect = 0.001
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 4 GEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 41
G +RK+TIPA + YG + IP ++TL FEV+L+ +
Sbjct: 324 GGERKITIPAPMAYGNQSIPG-IPKNSTLVFEVKLVRV 360
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 36.3 bits (80), Expect = 0.002
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 36 VELINIGDSPPAT---NVFKEIDADKDNMLSREEVSIELAFQAMDTDRDGELSREEVSDY 92
V + ++G SP A ++ E+DAD + + E +A + DTD + EEV +
Sbjct: 36 VVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNE-----EEVREA 90
Query: 93 LKKQMVPADGGEVSEDIKQMLES-----HDKLVEEIFQHEDKDKNGFISHEEFS 141
K +G E++ +L S + V ++ + D D +G I++EEFS
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFS 144
Score = 25.4 bits (53), Expect = 3.6
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 51 FKEIDADKDNMLSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIK 110
FK D D + ++ EE++ L T LS+EEV+D +++ DG E+
Sbjct: 91 FKVFDKDGNGYITVEELTHVL------TSLGERLSQEEVADMIREADTDGDGVINYEEFS 144
Query: 111 QMLES 115
+++ S
Sbjct: 145 RVISS 149
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 33.5 bits (73), Expect = 0.014
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 60 NMLSREEVSIEL--AFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIKQMLESHD 117
++ SR E++ +L AFQ D D +G +S +E+ + + G V + + ++ +
Sbjct: 90 SVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA-IYKMVGSMVK--LPEDEDTPE 146
Query: 118 KLVEEIFQHEDKDKNGFISHEEF-SGPKHD 146
K V +IF DK+K+G ++ EEF G K D
Sbjct: 147 KRVNKIFNMMDKNKDGQLTLEEFCEGSKRD 176
Score = 25.4 bits (53), Expect = 3.6
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 74 QAMDTDRDGELSREEVSDYLKKQMVPADGGEVSED-----IKQMLESHDK--LVEEIFQH 126
Q D R ++E+ + K G +++ KQ D E +F
Sbjct: 12 QLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNV 71
Query: 127 EDKDKNGFISHEEF 140
D DKNG+I +EF
Sbjct: 72 FDADKNGYIDFKEF 85
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 30.3 bits (65), Expect = 0.13
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 94 KKQMVPADGGEVSEDIKQM-LESHDKLVEEIFQHEDKDKNGFISHEEF 140
K+Q D G+V + + L + + +EE FQ D D +G +S EEF
Sbjct: 308 KEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
Score = 29.1 bits (62), Expect = 0.29
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 69 IELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQH 126
+E FQ D D G+LS EE ++ + E+ + K+ DK+ E F+H
Sbjct: 335 LEETFQKADADHSGKLSFEEFQHFVS---LLKTRSEIVDIFKEYTSGSDKMSLEQFRH 389
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 29.9 bits (64), Expect = 0.17
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 1 MCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 41
M VG +R + IPA++ YG + IP ++ L F+V+L+ +
Sbjct: 322 MQVGGERTIHIPAAMAYGSKRLPG-IPANSDLVFDVKLLAV 361
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 29.9 bits (64), Expect = 0.17
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 58 KDNMLSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIKQMLESHD 117
K + L E+ + A++T D S +E + K + AD GE +++++ E
Sbjct: 13 KGSSLKVPEIKEKEKINAINTYEDVANSEDEFYNAQDKILFDADNGEQADELELSDEELV 72
Query: 118 KLVEEIFQHEDKDKNGFISHEEFSGPKHD 146
L + + + +EE SG K D
Sbjct: 73 ALESSSDEEDGNAEENLSENEELSGKKKD 101
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.9 bits (59), Expect = 0.68
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 61 MLSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSED-IKQMLES 115
+ S + ++ AF +D D DG + RE+V K M+ + + SED I M ES
Sbjct: 42 LTSSQIQELKEAFALLDKDGDGNIGREDV-----KTMLTSLNQDASEDSINHMFES 92
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 27.5 bits (58), Expect = 0.89
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 53 EIDADKDNM--LSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSED 108
E+ AD+ + L++ IE A + RD +S+EE S + V D ++S++
Sbjct: 654 ELVADQKQLKSLTKNHQEIEKAIHRKERQRDQYMSQEEDSKLFNRSRVSIDSFKISKE 711
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 0.89
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 42 GDSPPATNVFKEIDADKDNMLSREEVSIE-LAFQAMDTDRDGELSREEVSDYLKKQMVPA 100
GDS + FK I + + + + E L FQ D RDG L EEV + L + ++
Sbjct: 591 GDSTETSLTFKRIIHGLERLKADIALHSEILCFQLYDLKRDGTLRTEEVVE-LSESLILL 649
Query: 101 DGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEF 140
E E ++ L + ++ F ++ I+ E+F
Sbjct: 650 CCYEGDEKDEERLTVISEFLKSCFSGCQDRRSFQITMEDF 689
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.5 bits (58), Expect = 0.89
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 87 EEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEFSGPKHD 146
+E+S+++ ++ + +D E +D K + EE+ Q+E+ K EE P
Sbjct: 419 QEISNHVAEEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELEFPDEV 478
Query: 147 EL 148
EL
Sbjct: 479 EL 480
>SPBC21C3.09c |||fumarylacetoacetate |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 221
Score = 27.1 bits (57), Expect = 1.2
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Query: 19 ERGAGN-VIPPHATLHFEVEL 38
E G GN +IPP + H+EVEL
Sbjct: 42 EPGHGNLIIPPDVSAHYEVEL 62
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 2.1
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 82 GELSREEVSDYLKKQMVPA--DGGEVSEDIKQMLESHDKLVE 121
G++S + +SD LK+ + + G ED K ++ES KL++
Sbjct: 672 GDMS-DFISDLLKQNFLESLVHGNYTEEDAKNLIESAQKLID 712
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 39 INIGDSPPATNVFKEIDADKDNMLSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMV 98
++ D P + + K +DA++ +++ E A QA E +++V +K +
Sbjct: 631 VSFNDRPQGSALVKLVDAEELIAAREQKLEEERAKQAKKAQAKAEQEKKQVERVMKGKTS 690
Query: 99 PAD 101
P++
Sbjct: 691 PSE 693
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 25.8 bits (54), Expect = 2.7
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 73 FQAMDTDRDGELSREEVSDYLKKQMVPAD-GGEVSEDIKQMLESHDKLVEEIFQHEDKDK 131
F +D +G+ S EEVS+Y P+D E SE+ + D E + E+ +
Sbjct: 931 FLGAPSDDEGDDSVEEVSEYEASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEESGE 990
Query: 132 N 132
+
Sbjct: 991 D 991
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 101 DGGEVSEDIKQMLESHDKLVEEIFQHEDKDKN-GFISHEEFSGPKHDE 147
D G SED+K+ ++ +L ++F+ K++N G S + S P+ D+
Sbjct: 626 DEGITSEDMKKKIDEIQQLSLKVFESVYKNQNQGNESSGDNSAPEGDK 673
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 2.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 18 GERGAGNVIPPHATLHFEVELINIGDSP 45
G+ G+G + P AT +FE ++ NI D P
Sbjct: 376 GKLGSGLINPLVATQNFEYKMSNILDKP 403
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 81 DGELSREEVSDYLKK--QMVPADGGEVSEDIK 110
DG R++V DYLKK Q + + E E +K
Sbjct: 318 DGSRDRQDVEDYLKKVLQELLCEAEECKEKVK 349
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 3.6
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 107 EDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEFSGPKHDEL 148
E +K E H + +E+ +H+D D + S +F+ KHD++
Sbjct: 34 EAMKADRERHIRQEKEMKRHDD-DGRQYQSDRKFAKSKHDDI 74
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 25.4 bits (53), Expect = 3.6
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 46 PATNVFKEIDADKDNMLSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEV 105
P + E + DK+N S++E A Q + ++ E+S ++ KQ D +
Sbjct: 95 PTKHSLDENEKDKENKKSKKETVSSPAEQLLALTQNQEISLYKLLKKYNKQASKEDSLDS 154
Query: 106 SEDIKQMLESHD 117
E +K + + D
Sbjct: 155 KEVLKHLAITAD 166
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 80 RDGELSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDK 131
R+ + ++E LKKQ AD +++ + + E +++EE + E DK
Sbjct: 662 REEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDK 713
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 11 IPASLGYGERGAGNV-IPPHAT 31
+PA GY ++G GNV +PP A+
Sbjct: 541 VPADNGYYQQGYGNVMMPPDAS 562
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 24.6 bits (51), Expect = 6.3
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 49 NVFKEIDADKDNMLSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSED 108
NV E +D+ +S + +E F+ +D+ + L + E SE+
Sbjct: 56 NVNSEDTPSEDDSMSMDAF-LEGGFEELDSANSNDAGSSRKRKNLPNENTQDSTSESSEE 114
Query: 109 IKQMLESHDKLVEEIFQHEDKDKNGFISHEE 139
+ LES+ K +E + + +D + F+ +
Sbjct: 115 EEDGLESYQKQLEGL-KEKDPEFYKFLEQND 144
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 24.6 bits (51), Expect = 6.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 77 DTDRDGELSREEVSDYLKK 95
DTD DG++ EE SD + K
Sbjct: 248 DTDSDGQMEDEEKSDSVHK 266
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 24.2 bits (50), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 116 HDKLVEEI--FQHEDKDKNGFISHEEFSGPK 144
HD+ E + E +D N F H E GPK
Sbjct: 21 HDRGPETLKCLYDESEDNNNFTMHSESIGPK 51
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 24.2 bits (50), Expect = 8.3
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 67 VSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIKQM 112
+ + F+ + ++ R E+ +YL+ Q +P D EDIK++
Sbjct: 301 MKLSCGFEILYNSKENVEKRTEIDEYLQIQPLPTD-----EDIKKI 341
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 24.2 bits (50), Expect = 8.3
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 58 KDNMLSREEVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIKQMLESHD 117
K ++L R+E S F +M + +E+SDY++ + DG + E Q+ +
Sbjct: 283 KYHILQRDEESEPDFFDSMVRRNMSDAELKEISDYVESSL--RDGSFILEAHIQI--DYK 338
Query: 118 KLVEEIFQH 126
+++E I H
Sbjct: 339 RILEIIIDH 347
>SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 455
Score = 24.2 bits (50), Expect = 8.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 66 EVSIELAFQAMDTDRDGELSREEVSDYLKKQMVPADGGEVSEDIKQM 112
+V E + +D + ELS E+ D+LK++ P D E IK++
Sbjct: 363 KVEAEERIELESSDSEKELS--ELIDFLKREHPPEDTPEKRVKIKRI 407
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.134 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,120
Number of Sequences: 5004
Number of extensions: 28867
Number of successful extensions: 124
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 95
Number of HSP's gapped (non-prelim): 39
length of query: 148
length of database: 2,362,478
effective HSP length: 67
effective length of query: 81
effective length of database: 2,027,210
effective search space: 164204010
effective search space used: 164204010
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 50 (24.2 bits)
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