GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000619-TA|BGIBMGA000619-PA|IPR001179|Peptidylprolyl
isomerase, FKBP-type, IPR002048|Calcium-binding EF-hand,
IPR000886|Endoplasmic reticulum targeting sequence
         (148 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.43 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   0.57 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   0.57 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   5.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   9.4  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   9.4  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    20   9.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 115 SHDKLVEEIFQHEDKDKNGFISHEE 139
           S + LV  +F H D++ NG +  EE
Sbjct: 233 SKEYLVSIMFSHYDRNNNGNLEREE 257


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 14/50 (28%), Positives = 21/50 (42%)

Query: 12  PASLGYGERGAGNVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 61
           P +  Y  R   N+  P   L F +EL  + +SP     F + D  K  +
Sbjct: 111 PIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 160


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 14/50 (28%), Positives = 21/50 (42%)

Query: 12  PASLGYGERGAGNVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 61
           P +  Y  R   N+  P   L F +EL  + +SP     F + D  K  +
Sbjct: 126 PIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 175


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/43 (23%), Positives = 24/43 (55%)

Query: 90  SDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKN 132
           ++ L +  + +D  +   D K+     D+L  ++F+ E+K+K+
Sbjct: 72  TEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKS 114


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 5/11 (45%), Positives = 8/11 (72%)

Query: 24  NVIPPHATLHF 34
           N++PPH   +F
Sbjct: 759 NILPPHVAAYF 769


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 87  EEVSDYLKKQMVPADGGEVSEDIKQMLESHDK 118
           E V +  KK++   +G EV+    + +  +DK
Sbjct: 109 ESVVETCKKEVTSTEGCEVAWQFGKCIYENDK 140


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 87  EEVSDYLKKQMVPADGGEVSEDIKQMLESHDK 118
           E V +  KK++   +G EV+    + +  +DK
Sbjct: 83  ESVVETCKKEVTSTEGCEVAWQFGKCIYENDK 114


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.134    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,568
Number of Sequences: 429
Number of extensions: 1886
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 148
length of database: 140,377
effective HSP length: 52
effective length of query: 96
effective length of database: 118,069
effective search space: 11334624
effective search space used: 11334624
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
S2: 40 (20.2 bits)