GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000618-TA|BGIBMGA000618-PA|IPR001179|Peptidylprolyl
isomerase, FKBP-type
         (62 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   0.72 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   0.72 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   0.72 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   0.72 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   1.3  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    18   8.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 0.72
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 18  PEVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDD 54
           P+  E+K E+   P+    K+      T +Y  ++DD
Sbjct: 212 PKKKEVKEEIEDEPDHKWKKNDSSKKKTRYYYRSVDD 248


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 0.72
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 17  GPEVTELKTEVVSVPEGCT 35
           GP++TEL+ E +   +  T
Sbjct: 282 GPQITELEPETIESQDAIT 300


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 0.72
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 17  GPEVTELKTEVVSVPEGCT 35
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 0.72
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 17  GPEVTELKTEVVSVPEGCT 35
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
          protein 10 protein.
          Length = 129

 Score = 20.6 bits (41), Expect = 1.3
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 34 CTTKSKHGDMLTMHY 48
          CT K K G    +HY
Sbjct: 78 CTEKQKEGSRKIIHY 92


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 127

 Score = 17.8 bits (34), Expect = 8.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 1  MTTLRCVLMLVALAGAGPEVTELKTEVVSVPEGCT 35
          M TLR    +  +A    +  +L +   +VP GCT
Sbjct: 53 METLRMFPPVPIIARQLNQDLKLASGDYTVPAGCT 87


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,068
Number of Sequences: 317
Number of extensions: 346
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 62
length of database: 114,650
effective HSP length: 42
effective length of query: 20
effective length of database: 101,336
effective search space:  2026720
effective search space used:  2026720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)
S2: 34 (17.8 bits)