GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000618-TA|BGIBMGA000618-PA|IPR001179|Peptidylprolyl
isomerase, FKBP-type
         (62 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    37   8e-05
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   0.80 
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    21   5.6  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    20   7.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    20   9.8  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding
          protein protein.
          Length = 108

 Score = 36.7 bits (81), Expect = 8e-05
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 26 EVVSVPEGC-TTKSKHGDMLTMHYTGTLDDGHKFDS 60
          ++V +  G  TT  K G    +HYTGTLDDG  FDS
Sbjct: 4  QIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDS 39


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 10/15 (66%), Positives = 11/15 (73%)

Query: 10  LVALAGAGPEVTELK 24
           LVA AG GPE+ E K
Sbjct: 198 LVASAGCGPEMNETK 212


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 17  GPEVTELKTEVVSVPEGCTTKSKHG 41
           GP   EL TEV+      T+K K G
Sbjct: 918 GPGGAELPTEVLEELTQFTSKKKTG 942


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
          pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 23 LKTEVVSVPEGCTTKSKHGDMLTMH 47
          L T V +V  G    + HG + T H
Sbjct: 8  LATLVAAVSAGLLPVANHGSIATSH 32


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 18  PEVTELKTEVVSVPEGCTTKSKHGDMLTMH 47
           PE   +  ++  +  GC+     GD   MH
Sbjct: 98  PEFRSIMEKIDLIVRGCSRVLLAGDFNAMH 127


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,817
Number of Sequences: 2123
Number of extensions: 1866
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 62
length of database: 516,269
effective HSP length: 41
effective length of query: 21
effective length of database: 429,226
effective search space:  9013746
effective search space used:  9013746
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)