Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000617-TA|BGIBMGA000617-PA|IPR000727|Target SNARE
coiled-coil region, IPR010989|t-snare, IPR006012|Syntaxin/epimorphin
family
(221 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16830.1 68418.m01972 syntaxin 21 (SYP21) / PEP12 homolog ide... 72 4e-13
At4g17730.1 68417.m02647 syntaxin 23 (SYP23) / PEP12-like protei... 68 6e-12
At5g46860.1 68418.m05774 syntaxin 22 (SYP22) (VAM3) identical to... 66 2e-11
At1g11250.1 68414.m01288 syntaxin, putative (SYP125) similar to ... 49 3e-06
At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to ... 48 4e-06
At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to ... 47 1e-05
At1g61290.1 68414.m06908 syntaxin, putative (SYP124) similar to ... 46 2e-05
At3g24350.1 68416.m03057 syntaxin, putative (SYP32) similar to S... 43 1e-04
At4g03330.1 68417.m00455 syntaxin, putative (SYP123) similar to ... 41 8e-04
At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical t... 40 0.002
At3g05710.2 68416.m00639 syntaxin, putative similar to syntaxin ... 38 0.005
At3g05710.1 68416.m00638 syntaxin, putative similar to syntaxin ... 38 0.005
At4g02195.1 68417.m00292 syntaxin 42 (SYP42) / TLG2b identical t... 37 0.009
At5g05760.1 68418.m00634 syntaxin 31 (SYP31) / SED5 identical to... 36 0.022
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 33 0.15
At5g41140.1 68418.m05001 expressed protein 30 1.4
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 30 1.4
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 2.5
At5g10500.1 68418.m01216 kinase interacting family protein simil... 29 2.5
At4g09960.2 68417.m01630 MADS-box protein (AGL11) 29 2.5
At4g09960.1 68417.m01629 MADS-box protein (AGL11) 29 3.3
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha... 29 3.3
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 28 4.4
At2g36200.1 68415.m04444 kinesin motor protein-related 28 4.4
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 28 5.8
At1g64180.1 68414.m07270 intracellular protein transport protein... 27 7.6
>At5g16830.1 68418.m01972 syntaxin 21 (SYP21) / PEP12 homolog
identical to Syntaxin homolog (PEP12 homolog)
(SP:Q39233) and syntaxin of plants 21 (GP:899122)
{Arabidopsis thaliana}; contains Pfam profiles
PF05739:SNARE domain and PF00804: Syntaxin
Length = 279
Score = 71.7 bits (168), Expect = 4e-13
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 1 MVNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAAN---KLTRERLS 57
+VN + TP+D+ ELR +L++ + +L K+TS+ L E +A+ K+ +L+
Sbjct: 53 LVNSIGTPKDTLELRDKLQKTRLQISELVKNTSAKLKEASEADLHGSASQIKKIADAKLA 112
Query: 58 DEYIATLNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDV---- 113
++ + L FQ QRL A++ ++ + I + + + + +++
Sbjct: 113 KDFQSVLKEFQKAQRLAAER---EITYTPVVTKEIPTSYNAPELDTESLRISQQQALLLQ 169
Query: 114 -RKQEQ--MNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIES 170
R+QE ++ + IR++E I VN +FK+L+ M++ QG +VD I S
Sbjct: 170 SRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQGNIVDDISS 229
Query: 171 SVEYTAQNVESATQQLREA 189
+++ + AT QLR+A
Sbjct: 230 NLDNSHAATTQATVQLRKA 248
>At4g17730.1 68417.m02647 syntaxin 23 (SYP23) / PEP12-like protein
identical to SP|O04378 Syntaxin 23 (AtSYP23) (AtPLP)
(AtPEP12-like protein) {Arabidopsis thaliana}
Length = 255
Score = 67.7 bits (158), Expect = 6e-12
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 1 MVNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAAN---KLTRERLS 57
+VN L TP+D+ ELR +L + + Y +L KDTS+ L E N K+ +L+
Sbjct: 50 LVNTLGTPKDTPELREKLHKTRLYIGQLVKDTSAKLKEASETDHQRGVNQKKKIVDAKLA 109
Query: 58 DEYIATLNSFQATQRLVAQKT---KEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDVR 114
++ A L FQ QRL A++ V K S + + +
Sbjct: 110 KDFQAVLKEFQKAQRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGDKHPEQRALLVESK 169
Query: 115 KQE--QMNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSV 172
+QE ++ + I++++ I V++IFK+L+ ++H QG ++D I + +
Sbjct: 170 RQELVLLDNEIAFNEAVIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGNMIDDIGTHI 229
Query: 173 E 173
+
Sbjct: 230 D 230
>At5g46860.1 68418.m05774 syntaxin 22 (SYP22) (VAM3) identical to
GP|8809669| syntaxin related protein AtVam3p
[Arabidopsis thaliana]
Length = 268
Score = 65.7 bits (153), Expect = 2e-11
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 1 MVNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAAN---KLTRERLS 57
+VN L TP+D+ ELR +L + + + +L KDTS+ L E + N K+ +L+
Sbjct: 45 LVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLA 104
Query: 58 DEYIATLNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDVRKQE 117
++ A L FQ Q+ A+ +E + + G +K + + K++
Sbjct: 105 RDFQAVLKEFQKAQQTAAE--RETTYTPFVPQSALPSSYTAGEVDKVPEQRAQLQESKRQ 162
Query: 118 Q---MNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEY 174
+ ++ + I+++ I VN+IFK+L+ +++ QG ++D I + ++
Sbjct: 163 ELVLLDNEIAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDN 222
Query: 175 TAQNVESATQQLREA 189
+ QL +A
Sbjct: 223 SRAATSQGKSQLVQA 237
>At1g11250.1 68414.m01288 syntaxin, putative (SYP125) similar to
syntaxin-related protein At-SYR1 GB:AAD11809 GI:4206789
from [Arabidopsis thaliana]
Length = 298
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 64 LNSFQATQRLVAQKTKEDVKKA-------KAQSINIGDPFAMGNSNKDLVEMTETDVRKQ 116
++SFQ + + + KE V++ KA I + A G S L + Q
Sbjct: 134 MDSFQGLRARMNNEYKETVERRYFTITGEKADEQTIDNLIASGESENFLQKAI------Q 187
Query: 117 EQMNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTA 176
EQ Q ++++E ++L ++ +F +++ ++ AQG+ +++IES V +
Sbjct: 188 EQGRGQILDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIESHVAKAS 247
Query: 177 QNVESATQQLREAGNYKNKLRKKKVY 202
V T QL++A Y+ RK Y
Sbjct: 248 SFVRRGTDQLQDAREYQKSSRKWTCY 273
>At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 304
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 116 QEQMNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYT 175
QEQ Q +R LE +L + IF +++ ++ AQGE++D+IES V
Sbjct: 193 QEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFLDMAVLVDAQGEMLDNIESQVSSA 252
Query: 176 AQNVESATQQLREAGNYKNKLRK 198
+V+S L+ A + + RK
Sbjct: 253 VDHVQSGNTALQRAKSLQKNSRK 275
>At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 306
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 137 IRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREAGNYKNKL 196
+R LE +L + +F +++ ++ AQGE++D+IE+ V +V+S QL +A +
Sbjct: 215 VRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSSAVDHVQSGNNQLTKAVKSQKSS 274
Query: 197 RK 198
RK
Sbjct: 275 RK 276
>At1g61290.1 68414.m06908 syntaxin, putative (SYP124) similar to
syntaxin-related protein Nt-syr1 GI:4206787 from
[Nicotiana tabacum]
Length = 303
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 64 LNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETD--VRK--QEQM 119
++SFQ + + + KE V++ + I A + ++L+ E++ ++K QEQ
Sbjct: 139 MDSFQGLRARMNAEYKETVER---RYFTITGEQADEQTIENLISSGESENFLQKAIQEQG 195
Query: 120 NMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNV 179
Q ++++E +++ ++ +F +++ ++ +QG+ ++ IES V + V
Sbjct: 196 RGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNDIESHVSKASSFV 255
Query: 180 ESATQQLREAGNYKNKLRKKKVY 202
T QL++A Y+ RK Y
Sbjct: 256 RRGTDQLQDAREYQKSSRKWTCY 278
>At3g24350.1 68416.m03057 syntaxin, putative (SYP32) similar to
SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis
thaliana}, syntaxin 5A GB:NP_003155 from [Homo sapiens]
(J. Mol. Neurosci. (1997) 8 (2), 159-161)
Length = 347
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 108 MTETDVRKQEQMNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDS 167
+ ++ ++Q+Q + +ES I ++ IF +L+TM+ QGE+
Sbjct: 236 LQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIR 295
Query: 168 IESSVEYTAQNVESATQQL 186
I+ ++E T NVE A QL
Sbjct: 296 IDQNMEDTLANVEGAQSQL 314
>At4g03330.1 68417.m00455 syntaxin, putative (SYP123) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 305
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 116 QEQMNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYT 175
QEQ Q ++++E +L ++ +F +++ ++ AQG +++ IES+V
Sbjct: 195 QEQGRGQVMDTLSEIQERHDTVKEIERSLLELHQVFLDMAALVEAQGNMLNDIESNVSKA 254
Query: 176 AQNVESATQQLREAGNYKNKLRK 198
+ V T QL A + RK
Sbjct: 255 SSFVMRGTDQLHGAKVLQRNNRK 277
>At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical to
SP|O65359 Syntaxin 41 (AtSYP41) (AtTLG2a) {Arabidopsis
thaliana}
Length = 322
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 136 DIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREA 189
+I+Q+ + + I K+LS ++ QG +VD I+ ++E A VE +QL++A
Sbjct: 235 EIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQKA 288
>At3g05710.2 68416.m00639 syntaxin, putative similar to syntaxin of
plants 42 [Arabidopsis thaliana] GI:5059352
Length = 331
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 136 DIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREA 189
+I+Q+ + + I K+LS ++ QG +VD I+ +++ A V+ +QL++A
Sbjct: 244 EIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQKA 297
>At3g05710.1 68416.m00638 syntaxin, putative similar to syntaxin of
plants 42 [Arabidopsis thaliana] GI:5059352
Length = 330
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 136 DIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREA 189
+I+Q+ + + I K+LS ++ QG +VD I+ +++ A V+ +QL++A
Sbjct: 243 EIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQKA 296
>At4g02195.1 68417.m00292 syntaxin 42 (SYP42) / TLG2b identical to
SP|Q9SWH4 Syntaxin 42 (AtSYP42) (AtTLG2b) {Arabidopsis
thaliana}
Length = 323
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 138 RQLESDILTVND---IFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREA 189
R+++ + +VND I K+LS ++ QG +VD I+ +V+ + +VE +QL++A
Sbjct: 235 REIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKA 289
>At5g05760.1 68418.m00634 syntaxin 31 (SYP31) / SED5 identical to
SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis
thaliana}
Length = 336
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 137 IRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQL 186
+ +ES I ++ IF +L+TM+ QGE+ I+ +++ + NVE A L
Sbjct: 254 LHSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVNVEGARSAL 303
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 33.1 bits (72), Expect = 0.15
Identities = 33/183 (18%), Positives = 73/183 (39%), Gaps = 12/183 (6%)
Query: 17 QLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQATQRLVAQ 76
QLRQI+ + +++++ K N + L L E T ++ +
Sbjct: 209 QLRQIETEKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQELETTKRKYEQQYSQIES 268
Query: 77 KTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDVRKQEQMNMQAXXXXXXXXXXXXD 136
+TK + K + Q N +D+ ++ + + + Q++
Sbjct: 269 QTKTEKSKWEEQK---------KNEEEDMDKLLKENDQFNLQISALRQELETTRKAYEQQ 319
Query: 137 IRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREAGNYKNKL 196
Q+ES + + + +G+VV++ ++++E + V+ Q +EA + KN L
Sbjct: 320 CSQMESQTMVATTGLESRLKELEQEGKVVNTAKNALE---ERVKELEQMGKEAHSAKNAL 376
Query: 197 RKK 199
+K
Sbjct: 377 EEK 379
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 12 QELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQATQ 71
Q LR Q+ + +Q L ++ +SL E + DN +NK + +R + I +
Sbjct: 314 QSLRKQIVKETKRSQDLLREVTSLKQERDLLKADNESNKASDKRKEEAKIRNKLQLEGRD 373
Query: 72 -RLVAQKTKEDVKKAKAQSINI 92
++ ++T+E++ K + N+
Sbjct: 374 PHVLLEETREELDYEKDLNSNL 395
>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1004
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/84 (20%), Positives = 38/84 (45%)
Query: 1 MVNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEY 60
++ +Q + S E + Q + + Q L++D S + + + + ++L +
Sbjct: 559 LIEDVQETEQSVEKQKQSPKKEEMEQYLSRDMSEQVTKSLPEEEQCVQEYGAYDKLEAQD 618
Query: 61 IATLNSFQATQRLVAQKTKEDVKK 84
+ T+N + +Q+ KED KK
Sbjct: 619 VLTINKLEESQQTEQSVEKEDTKK 642
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 29.1 bits (62), Expect = 2.5
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Query: 42 MPKDNAANKLTRER-LSDEYIATLNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGN 100
M K AA ++R L E + N TQ + + +E K+AKA+ + + A+ N
Sbjct: 155 MTKLEAALLCNQKRELEMELVKKTNQVSETQMRLKRLEEETEKRAKAEMKIVKEKEALWN 214
Query: 101 SNKDLVEMTETDVRKQEQMNMQAXXXXXXXXXXXXDIRQLESDILTVNDIFKELSTMIHA 160
+ L +T +K+++ N + I ++ + D K+L +
Sbjct: 215 KVQKLEAGVDTFRKKRKEFNEEMKSKITENQKLHTKIAVIDE----IEDKSKKLEYQVKE 270
Query: 161 QGEVVDSIESSVE 173
Q +++ + ++
Sbjct: 271 QEDIIQRLSMEIK 283
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 137 IRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVE-YTAQNVESATQQLREAGNYKNK 195
I +L +D++ + ++F + +IH E +D +++ + +N S T + G +
Sbjct: 339 IDELVNDVINLENLFSSQAALIHRLREEIDDLKAQIRALQKENNSSQTDDNMDMGKKLKE 398
Query: 196 LRKK 199
+ +K
Sbjct: 399 MEEK 402
>At4g09960.2 68417.m01630 MADS-box protein (AGL11)
Length = 216
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 VNQLQTPQDSQELRAQLRQIQNYTQKLAKDT-SSLLMELMRMPKDNAANKLTRERLSDE 59
+N Q+S +LR Q++ IQN + L D+ SSL ++ ++ ++ ++R R E
Sbjct: 85 INAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKE 143
>At4g09960.1 68417.m01629 MADS-box protein (AGL11)
Length = 230
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 VNQLQTPQDSQELRAQLRQIQNYTQKLAKDT-SSLLMELMRMPKDNAANKLTRERLSDEY 60
+N Q+S +LR Q++ IQN + L D+ SSL ++ ++ ++ ++R R S ++
Sbjct: 85 INAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIR-SKKH 143
Query: 61 IATLNSFQATQRLVAQKTKEDV 82
L + Q+ + E++
Sbjct: 144 ELLLVEIENAQKREIELDNENI 165
>At2g17930.1 68415.m02076 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF02259 FAT domain, PF00454
Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
domain
Length = 3795
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 18 LRQIQNYTQKLAKDTSSLLMELMRMPK--DNAANKLTRERLSD--EYIAT 63
L+++ Y K ++TS +LM+++R+ D A ++ R+ D EY+AT
Sbjct: 1101 LKRLPVYASKEQEETSQVLMQILRVVNNVDEANSEARRKSFQDVVEYLAT 1150
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 2 VNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYI 61
++QL++ ++ +R ++ KLA++ L+R + N+ R+R D Y
Sbjct: 613 ISQLES-DSNENIRELCSKVDIAYAKLAEEVEKTA-SLVRKSESIDLNEEHRQRELDHYK 670
Query: 62 ATLNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGNS 101
L TQ L+ +K + +K + ++ + + NS
Sbjct: 671 EMLEESTKTQLLLQEKVVDVENDSKRKLADVSEALEIANS 710
>At2g36200.1 68415.m04444 kinesin motor protein-related
Length = 1056
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 11 SQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQAT 70
++ELR + TQ++++ TS+ +LM K NA + +D I ++ FQ T
Sbjct: 668 ARELRQRFHTTMEQTQEMSEYTSTFFQKLMEESK-NAETRAA--EANDSQINSIIDFQKT 724
Query: 71 QRLVAQKTKEDVKKAKAQSINI 92
++K D K A N+
Sbjct: 725 YE---AQSKSDTDKLIADLTNL 743
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/124 (14%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Query: 79 KEDVKKAKAQSINIGDPFAMGNSN-----KDLVEMTETDVRKQEQMNMQAXXXXXXXXXX 133
+E+ K + + I D S +L E +T +K+ +++
Sbjct: 512 EEEKKSLSSMILEITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVHEAHKRDS 571
Query: 134 XXDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREAGNYK 193
+++LE+ + + + KEL+ +++ E + + + ++ A ++E +
Sbjct: 572 SSQVKELEARVESAEEQVKELNQNLNSSEEEKKILSQQISEMSIKIKRAESTIQELSSES 631
Query: 194 NKLR 197
+L+
Sbjct: 632 ERLK 635
>At1g64180.1 68414.m07270 intracellular protein transport protein
USO1-related similar to Rap8 (GI:2326183) [Rhynchosciara
americana]; contains weak similarity to
Swiss-Prot:P25386 intracellular protein transport
protein USO1 [Saccharomyces cerevisiae]
Length = 593
Score = 27.5 bits (58), Expect = 7.6
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 5 LQTPQDSQELRAQLRQI-QNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIAT 63
+Q+ +D ++LR + + + Q+L++ S+L + M + + K+ ERL DE+
Sbjct: 266 VQSLEDERKLRKRSESLYRKLAQELSEVKSTLSNCVKEMERGTESKKIL-ERLCDEFAKG 324
Query: 64 LNSFQATQRLVAQKTKEDVK 83
+ S++ + QK ++ K
Sbjct: 325 IKSYEREIHGLKQKLDKNWK 344
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.123 0.315
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,553,154
Number of Sequences: 28952
Number of extensions: 112276
Number of successful extensions: 470
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 442
Number of HSP's gapped (non-prelim): 36
length of query: 221
length of database: 12,070,560
effective HSP length: 78
effective length of query: 143
effective length of database: 9,812,304
effective search space: 1403159472
effective search space used: 1403159472
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -