Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000616-TA|BGIBMGA000616-PA|undefined
(144 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB117974-1|BAD21206.1| 427|Homo sapiens brain epsilon-sarcoglyc... 32 0.64
U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog prot... 32 0.84
BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven thro... 32 0.84
BC021709-1|AAH21709.1| 437|Homo sapiens sarcoglycan, epsilon pr... 29 5.9
AY359042-1|AAQ89401.1| 437|Homo sapiens SGCE protein. 29 5.9
AJ000534-1|CAA04167.1| 437|Homo sapiens epsilon-sarcoglycan pro... 29 5.9
AF516515-1|AAM64204.1| 437|Homo sapiens mutant epsilon-sarcogly... 29 5.9
AF036364-1|AAC04368.1| 413|Homo sapiens epsilon-sarcoglycan pro... 29 5.9
AF031920-1|AAC14021.1| 145|Homo sapiens epsilon-sarcoglycan pro... 29 5.9
AC069292-1|AAS07485.1| 437|Homo sapiens unknown protein. 29 5.9
M81830-1|AAA58248.1| 369|Homo sapiens somatostatin receptor iso... 29 7.8
BT019926-1|AAV38729.1| 369|Homo sapiens somatostatin receptor 2... 29 7.8
BC095495-1|AAH95495.1| 369|Homo sapiens somatostatin receptor 2... 29 7.8
BC019610-1|AAH19610.1| 369|Homo sapiens somatostatin receptor 2... 29 7.8
BC009522-1|AAH09522.1| 346|Homo sapiens Unknown (protein for IM... 29 7.8
BC000256-1|AAH00256.1| 272|Homo sapiens Similar to somatostatin... 29 7.8
AY236542-1|AAO92064.1| 369|Homo sapiens somatostatin receptor 2... 29 7.8
AF184174-2|AAF42809.1| 369|Homo sapiens somatostatin receptor 2... 29 7.8
AF184174-1|AAF42810.1| 356|Homo sapiens somatostatin receptor 2... 29 7.8
AB065911-1|BAC06126.1| 369|Homo sapiens seven transmembrane hel... 29 7.8
>AB117974-1|BAD21206.1| 427|Homo sapiens brain epsilon-sarcoglycan
protein.
Length = 427
Score = 32.3 bits (70), Expect = 0.64
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSRYSDYWLDRHTG-NRW 71
G YK + + +T F I +A+ S+V L LIL + CC R L H+ +
Sbjct: 275 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVIQLVHHSAIQKS 334
Query: 72 IVSIWSTTPHKQPPLDLTELNI-EKLPIQFVAPYHSDEY 109
+ + +++ L+ L + + + + P H+D Y
Sbjct: 335 TKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNY 373
>U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog
protein.
Length = 1074
Score = 31.9 bits (69), Expect = 0.84
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 25 KVGDFTPFY-IAIAISSVILGFLLILNIVCCCSRY 58
+ G+F F+ IA+ +SS ILG LL L + C RY
Sbjct: 962 RCGEFNMFHMIAVGLSSSILGCLLTLLVYTYCQRY 996
>BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1074
Score = 31.9 bits (69), Expect = 0.84
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 25 KVGDFTPFY-IAIAISSVILGFLLILNIVCCCSRY 58
+ G+F F+ IA+ +SS ILG LL L + C RY
Sbjct: 962 RCGEFNMFHMIAVGLSSSILGCLLTLLVYTYCQRY 996
>BC021709-1|AAH21709.1| 437|Homo sapiens sarcoglycan, epsilon
protein.
Length = 437
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSR 57
G YK + + +T F I +A+ S+V L LIL + CC R
Sbjct: 299 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRR 343
>AY359042-1|AAQ89401.1| 437|Homo sapiens SGCE protein.
Length = 437
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSR 57
G YK + + +T F I +A+ S+V L LIL + CC R
Sbjct: 299 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRR 343
>AJ000534-1|CAA04167.1| 437|Homo sapiens epsilon-sarcoglycan
protein.
Length = 437
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSR 57
G YK + + +T F I +A+ S+V L LIL + CC R
Sbjct: 299 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRR 343
>AF516515-1|AAM64204.1| 437|Homo sapiens mutant epsilon-sarcoglycan
protein.
Length = 437
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSR 57
G YK + + +T F I +A+ S+V L LIL + CC R
Sbjct: 299 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRR 343
>AF036364-1|AAC04368.1| 413|Homo sapiens epsilon-sarcoglycan
protein.
Length = 413
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSR 57
G YK + + +T F I +A+ S+V L LIL + CC R
Sbjct: 275 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRR 319
>AF031920-1|AAC14021.1| 145|Homo sapiens epsilon-sarcoglycan
protein.
Length = 145
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSR 57
G YK + + +T F I +A+ S+V L LIL + CC R
Sbjct: 7 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRR 51
>AC069292-1|AAS07485.1| 437|Homo sapiens unknown protein.
Length = 437
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAI-SSVILGFLLILNIVCCCSR 57
G YK + + +T F I +A+ S+V L LIL + CC R
Sbjct: 299 GEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRR 343
>M81830-1|AAA58248.1| 369|Homo sapiens somatostatin receptor
isoform 2 protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
>BT019926-1|AAV38729.1| 369|Homo sapiens somatostatin receptor 2
protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
>BC095495-1|AAH95495.1| 369|Homo sapiens somatostatin receptor 2
protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
>BC019610-1|AAH19610.1| 369|Homo sapiens somatostatin receptor 2
protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
>BC009522-1|AAH09522.1| 346|Homo sapiens Unknown (protein for
IMAGE:3354783) protein.
Length = 346
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 176 GESGAWYTGFIIYTFILGFLVPLTIICLC 204
>BC000256-1|AAH00256.1| 272|Homo sapiens Similar to somatostatin
receptor 2 protein.
Length = 272
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 102 GESGAWYTGFIIYTFILGFLVPLTIICLC 130
>AY236542-1|AAO92064.1| 369|Homo sapiens somatostatin receptor 2
protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
>AF184174-2|AAF42809.1| 369|Homo sapiens somatostatin receptor 2A
protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
>AF184174-1|AAF42810.1| 356|Homo sapiens somatostatin receptor 2B
protein.
Length = 356
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
>AB065911-1|BAC06126.1| 369|Homo sapiens seven transmembrane helix
receptor protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 27 GDFTPFYIAIAISSVILGFLLILNIVCCC 55
G+ +Y I + ILGFL+ L I+C C
Sbjct: 199 GESGAWYTGFIIYTFILGFLVPLTIICLC 227
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.137 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,096,068
Number of Sequences: 224733
Number of extensions: 974508
Number of successful extensions: 2158
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2148
Number of HSP's gapped (non-prelim): 20
length of query: 144
length of database: 73,234,838
effective HSP length: 83
effective length of query: 61
effective length of database: 54,581,999
effective search space: 3329501939
effective search space used: 3329501939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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